BAC Information

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BAC

Clone NameB6Ng01-054G05
Chromosome10 (Build37)
Map Location 127,624,733 - 127,625,258
singlet/doubletsinglet
Overlap genenone
Upstream geneD10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2
Downstream geneLOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G05.bB6Ng01-054G05.g
ACCDH877143DH877144
length6751,213
definitionDH877143|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G05, 5' end.DH877144|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttgttagtatcttgttgagaaattttgtatctattcatcag
agatagtggcctgtaatttttttttcttttcctttttggttgtttttggt
atcatggtaatattggctttgtagagggaatttggaaatgttccttcctt
ttctattttggttgtttttgttgttgtttgttttgttttgttttaaacag
cggaactacagggcatggtggcacaccctttacttttatcccctcttttt
tccccccttaggttttatttattttatgtatatgagaacactctgtcatc
aaacacaccagaagagggtagcaaatcccattacagatagttgtgagatg
tgattgctgggaattgaactcaggacggcgtcagatcttggagttacaga
cagctgtgagccaccatgtggttgctgggatttgaactcaggacctctgg
aagagcagtcagtgctcttaaccactgaaccatctctccaggtggtgagg
agtactgatgttagtctttctttgcaggtctgcacttagtccatctggtt
ttgagctttttgtcgttgggagatgccctactgagggtctctgttgctat
gatgaaaccccatgaacataaccaacttgagggtcaggtttattttgtta
tacttctacatcaaaggaagtcagg
gaattctctacactgattttcctagtggtggcacctgtttgctgttccac
caacagtgaatgaagattcttctttgcattcaccagcatttgttaatcag
tttgtttatttatttgttttatcttaatcattctgattggggaaagatga
gatctcagaatagttttaattttcatttctcaaattgctgatgataaaca
cttttaagagtatttcttagctatttttttttatttctttttttgagaac
tctgtgttcagacctatagctttgagttctttgtttatattagaagtaat
tctttatcagatctgtggttgacagcatttttctttctcttcactcaatt
gattgttttctttgttgcacagaagacttctagatagatgaggtgccctc
tatcaattgttgaccttaattcaggagcacatagcgtcctgtttagcagt
ctttccctacacctttccctttagagcactgcccttgtctgcttccagca
ggatcagtgttgcaggagtcacagaaaggtctttgatccatttttacaaa
ttacttatttctatcttatgtgtattggtgttttgcctttaagagtatct
gtgtgaaaatgtcttcattcttggagctggagttacagactgtagtgagc
tgccttgtggtgctgggatttgaacctaggtcctctggaagagaaaccag
tgttcttagcctctgagctgtttttccagtcccctttgatccatttttta
ccataggtacttagagctttaagattccctcttagaactgcttttaatgt
gtccagaggttttgttgtgttttcattttcatgtaattcaaggaaagttt
tatttctttctagatttcctaaacttttttgactcattcatcattcagta
atgtgcttaatctccatgagtttatatgattaccagagattcacttggtg
tttattttaagctttatcacattgtggtcatataggatacacagagtcgt
tcagcttctgacttgttgagatttgtttctgtttcaggaggagctaccat
gggctcctgaatagattgtatggtcttggatgggtgggcttggtatgggg
tggggaaattccgtggaaaggtctctacggagctgtgccaatagatctgt
cgtaggagtgcttgacagatcctcggtccattcaggtgtggagaggagac
aaccccgcctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127624733_127625258
seq2: B6Ng01-054G05.b_348_536

seq1  ACACACCAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCATC  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAAGAATAGTCGA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTCTTAACCATTGAGCCATCTCTCCAGCCCCTGTTTTGTTTTGTTTTA  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGACAGGGATTCTCTTATAACCCTAGCTTTTTGTTTGTTTGTTTCGAGAC  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGTTTCTCTGTGTAGCCCTGGCTGTCCGGGAACTCACTTTGTAGACCA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGG  300
                                                        
seq2  --------------------------------------------------  0

seq1  GATTAAAGGCATGCGCCACCACTGCCTGGT-GCTTTTTTTTTTTTTTTTT  349
                |  | |||  |  |   ||| ||   |    ||     | 
seq2  ----------ACACACCAGAAGAG---GGTAGCAAATCCCATTACAGATA  37

seq1  TTTTTAAGAT-TTATTATTTGTCATTTATATGAGTACACTATCTCTCTTC  398
       || | |||| | |||  | |  ||| |         |||          
seq2  GTTGTGAGATGTGATTGCTGGGAATTGA---------ACT----------  68

seq1  AGACACACCAGAAGAGGGCATCAGATTCCT----TTACAGATGGTTGTGA  444
              |||  || ||| ||||| || |    |||||||  | |||||
seq2  --------CAG--GACGGCGTCAGA-TCTTGGAGTTACAGACAGCTGTGA  107

seq1  GCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGT  494
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGT  157

seq1  CAGTGCTCTTAACCCCCGAGCCATCTCTCCAG  526
      |||||||||||||| | || ||||||||||||
seq2  CAGTGCTCTTAACCACTGAACCATCTCTCCAG  189