BAC Information

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BAC

Clone NameB6Ng01-054G24
Chromosome10 (Build37)
Map Location 39,263,879 - 39,401,471
singlet/doubletdoublet
Overlap geneFyn, Traf3ip2, LOC667964, EG667970
Upstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, LOC629337
Downstream geneE130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374, Slc22a16, Ddo
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G24.bB6Ng01-054G24.g
ACCDH877181DH877182
length1,1911,011
definitionDH877181|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G24, 5' end.DH877182|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,400,246 - 39,401,471)(39,263,879 - 39,264,899)
sequence
gaattcatacagatttgaatttgcagcactattcactagctactgacttt
ggacagtatgcgtaaacatggaagttgaattatttattgaagtgatcctt
atcctgtgtgttgtagaatcacctggatgcttctaaagaggatgtctacc
agaccccatgccgcactaattagctcagaagtgggaacccttcgtgagtc
attttttggaataattcttatttattctaatgttaaaggctgttctggtt
tgctttctgttactgtgataagacacttaccaaaaccaacttgggaggaa
agggtttatttcatcatacaattcccagggcacaatccatcccttgggga
agtcagggcagcaactccatggaagaacccggaagctgaactgaaacaaa
gaccatagaggaacagtattactggctcagttcctaggacttgctcagct
tgctgtcctacatgatccaggaccacctgttgtgcctaggggtggcacaa
tgagctgggccctcccacgtcaatcattaatcaagaaaatattccgcaga
tttgcctacaggcctatctgattgtggcagtaactcatttgaggtttgtt
cttcccaggtcgtggcaatactgcacagaaagactaactcttggttattt
actcaagtgggtctgatttattctgcattgttttggtctcctgttctaat
ctatgagagattaatgtaagaagtagaagtagtcctgaacaaaggacgta
ttctgaaaatcacagaaaatatggtgacaaaaatggatgaggaacgtttg
tcctaatcaaccttttagaggagtctcgaaaggaagaaaattgtctttct
ggccttgctgactcagaatagtgcacaaagccacaatcagatattatcac
tctgtgccagtgttgtttccagcacacttgtgggagggccgttgctttcg
gcgtctccatgttttcagtacctgccttagacctggtgggctgttgggat
ggccccaggcacagctattacacacctggtcccaggtgggagactctttg
agacagctcttcatggtgtctgtttcagttcatcttcagtcccactgaca
tccagttaggtttctttgtaagactgacttggtcatggtggttttccgca
cacacatggctaaacgactgctgttgttctagtcgagcctg
gaattctcggtggctgatggatgagtgtggggattctctgcatcctcttt
ccagcttttggaagtttcgaagggcagtgatgctgagggcctttgtcagt
gcaactccatcaaagcattttctcagctctcagcttgttacttactgggc
atcagacactctgctgagacctgtgtacctcctgccatcccaagttacag
acaggaaactaacactggggcttttttttttttttttttttttggttttt
caagacagggtttctctgtgtagccctggctgtcctggaactcactttgt
agatcaggctggcctggaactcagaaacccgcctgcctctgcctcccaag
tgctgggattaaaggcatgcgccaccactgcccggctgacaattgggctt
ttaagggtctggcaaacccagtctgcaagcccaggtttgcctcactccaa
aactccttttcttcatttattttaacgtcattaaattccgtctttaccag
ctccactcgtatctgcagagcctgatttctacatgaccattcttgccctt
tggaagaacattctagcccagcccaccgtcgggcttgctgccactgtcac
tacagagaggtggtcctttttcctagctcttccttttacatcattcagaa
agcagccttgggacaaaaggtatctggagtgtccctgtgagcatttcaaa
cattgtcaccatcttaacgtatgaaggagagtccgctacaggaagctact
aagtcaagacccgtttctgtctgaggcagaagtagaggacaggtttcctg
gctgaccattgggcatgcagccatttctttaactggactgtgacttgggc
ttggagtggcccatcctgatgtgactctaacggacatcgcgtcttcactt
aaagcagagagcactagctggtagctgagaaaagcatcatctcttacata
ttatatcgctagtattttctttgtagcagttttttttttgtgtgttgttt
ggggttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_39400246_39401471
seq2: B6Ng01-054G24.b_48_1238 (reverse)

seq1  CAGGCTTCTGACTCAGAACAACA-CAGCCACGTCTGTCTTAGCCACTGTT  49
      ||||||   |||| ||||||||| ||| |      || ||||||| || |
seq2  CAGGCT--CGACT-AGAACAACAGCAGTC------GT-TTAGCCA-TG-T  38

seq1  GTGTGCGGTGAAAACACACCATGACCAAGACCAGTCTTACAAAAGGAAAA  99
      |||||||  |||||| |||||||||||||  ||||||||||||  |||  
seq2  GTGTGCG--GAAAAC-CACCATGACCAAG-TCAGTCTTACAAA--GAA--  80

seq1  ACACTTAACTGGGGATTGGTCAGTGAGAACCTGGAAGATGAACTGAGACA  149
        || |||||  ||||  ||||||| ||  || ||||||||||||| |||
seq2  --ACCTAACT--GGAT--GTCAGTGGGA--CT-GAAGATGAACTGAAACA  121

seq1  GACACCATGGAGGAGCTGTCTCAAAGAGTTCTCCCACCTGGGGACCAGGT  199
      |||||||| || |||||||||||||||| |||||||||| ||||||||||
seq2  GACACCAT-GAAGAGCTGTCTCAAAGAG-TCTCCCACCT-GGGACCAGGT  168

seq1  GTGTAAATAGCTGTGCCTTGGGGGCCATTCCCAACAGCCCACCAGGTCTA  249
      |||| |||||||||||||  ||||||| ||||||||||||||||||||||
seq2  GTGT-AATAGCTGTGCCT--GGGGCCA-TCCCAACAGCCCACCAGGTCTA  214

seq1  AGGCAGGTACTGAAAACATGGAGACGCCGAAAGCAACGGCCCTCCCACAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTACTGAAAACATGGAGACGCCGAAAGCAACGGCCCTCCCACAA  264

seq1  GTGTGCTGGAAACAACACTGGCACAGAGTGATAATATCTGATTGTGGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGGAAACAACACTGGCACAGAGTGATAATATCTGATTGTGGCTT  314

seq1  TGTGCACTATTCTGAGTCAGCAAGGCCAGAAAGACAATTTTCTTCCTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACTATTCTGAGTCAGCAAGGCCAGAAAGACAATTTTCTTCCTTTC  364

seq1  GAGACTCCTCTAAAAGGTTGATTAGGACAAACGTTCCTCATCCATTTTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCCTCTAAAAGGTTGATTAGGACAAACGTTCCTCATCCATTTTTG  414

seq1  TCACCATATTTTCTGTGATTTTCAGAATACGTCCTTTGTTCAGGACTACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATATTTTCTGTGATTTTCAGAATACGTCCTTTGTTCAGGACTACT  464

seq1  TCTACTTCTTACATTAATCTCTCATAGATTAGAACAGGAGACCAAAACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCTTACATTAATCTCTCATAGATTAGAACAGGAGACCAAAACAA  514

seq1  TGCAGAATAAATCAGACCCACTTGAGTAAATAACCAAGAGTTAGTCTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATAAATCAGACCCACTTGAGTAAATAACCAAGAGTTAGTCTTTC  564

seq1  TGTGCAGTATTGCCACGACCTGGGAAGAACAAACCTCAAATGAGTTACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTATTGCCACGACCTGGGAAGAACAAACCTCAAATGAGTTACTG  614

seq1  CCACAATCAGATAGGCCTGTAGGCAAATCTGCGGAATATTTTCTTGATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATCAGATAGGCCTGTAGGCAAATCTGCGGAATATTTTCTTGATTA  664

seq1  ATGATTGACGTGGGAGGGCCCAGCTCATTGTGCCACCCCTAGGCACAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGACGTGGGAGGGCCCAGCTCATTGTGCCACCCCTAGGCACAACA  714

seq1  GGTGGTCCTGGATCATGTAGGACAGCAAGCTGAGCAAGTCCTAGGAACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTCCTGGATCATGTAGGACAGCAAGCTGAGCAAGTCCTAGGAACTG  764

seq1  AGCCAGTAATACTGTTCCTCTATGGTCTTTGTTTCAGTTCAGCTTCCGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTAATACTGTTCCTCTATGGTCTTTGTTTCAGTTCAGCTTCCGGG  814

seq1  TTCTTCCATGGAGTTGCTGCCCTGACTTCCCCAAGGGATGGATTGTGCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATGGAGTTGCTGCCCTGACTTCCCCAAGGGATGGATTGTGCCC  864

seq1  TGGGAATTGTATGATGAAATAAACCCTTTCCTCCCAAGTTGGTTTTGGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGTATGATGAAATAAACCCTTTCCTCCCAAGTTGGTTTTGGTA  914

seq1  AGTGTCTTATCACAGTAACAGAAAGCAAACCAGAACAGCCTTTAACATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTATCACAGTAACAGAAAGCAAACCAGAACAGCCTTTAACATTA  964

seq1  GAATAAATAAGAATTATTCCAAAAAATGACTCACGAAGGGTTCCCACTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATAAGAATTATTCCAAAAAATGACTCACGAAGGGTTCCCACTTC  1014

seq1  TGAGCTAATTAGTGCGGCATGGGGTCTGGTAGACATCCTCTTTAGAAGCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAATTAGTGCGGCATGGGGTCTGGTAGACATCCTCTTTAGAAGCA  1064

seq1  TCCAGGTGATTCTACAACACACAGGATAAGGATCACTTCAATAAATAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGATTCTACAACACACAGGATAAGGATCACTTCAATAAATAATT  1114

seq1  CAACTTCCATGTTTACGCATACTGTCCAAAGTCAGTAGCTAGTGAATAGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCCATGTTTACGCATACTGTCCAAAGTCAGTAGCTAGTGAATAGT  1164

seq1  GCTGCAAATTCAAATCTGTATGAATTC  1226
      |||||||||||||||||||||||||||
seq2  GCTGCAAATTCAAATCTGTATGAATTC  1191

seq1: chr10_39263879_39264899
seq2: B6Ng01-054G24.g_66_1076

seq1  GAATTCTCGGTGGCTGATGGATGAGTGTGGGGATTCTCTGCATCCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGTGGCTGATGGATGAGTGTGGGGATTCTCTGCATCCTCTTT  50

seq1  CCAGCTTTTGGAAGTTTCGAAGGGCAGTGATGCTGAGGGCCTTTGTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTTGGAAGTTTCGAAGGGCAGTGATGCTGAGGGCCTTTGTCAGT  100

seq1  GCAACTCCATCAAAGCATTTTCTCAGCTCTCAGCTTGTTACTTACTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCCATCAAAGCATTTTCTCAGCTCTCAGCTTGTTACTTACTGGGC  150

seq1  ATCAGACACTCTGCTGAGACCTGTGTACCTCCTGCCATCCCAAGTTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACACTCTGCTGAGACCTGTGTACCTCCTGCCATCCCAAGTTACAG  200

seq1  ACAGGAAACTAACACTGGGGCTTTTTTTTTTTTTTTTTTTTTTGGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAACTAACACTGGGGCTTTTTTTTTTTTTTTTTTTTTTGGTTTTT  250

seq1  CAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGT  300

seq1  AGATCAGGCTGGCCTGGAACTCAGAAACCCGCCTGCCTCTGCCTCCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGCTGGCCTGGAACTCAGAAACCCGCCTGCCTCTGCCTCCCAAG  350

seq1  TGCTGGGATTAAAGGCATGCGCCACCACTGCCCGGCTGACAATTGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCATGCGCCACCACTGCCCGGCTGACAATTGGGCTT  400

seq1  TTAAGGGTCTGGCAAACCCAGTCTGCAAGCCCAGGTTTGCCTCACTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTCTGGCAAACCCAGTCTGCAAGCCCAGGTTTGCCTCACTCCAA  450

seq1  AACTCCTTTTCTTCATTTATTTTAACGTCATTAAATTCCGTCTTTACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTTTCTTCATTTATTTTAACGTCATTAAATTCCGTCTTTACCAG  500

seq1  CTCCACTCGTATCTGCAGAGCCTGATTTCTACATGACCATTCTTGCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCGTATCTGCAGAGCCTGATTTCTACATGACCATTCTTGCCCTT  550

seq1  TGGAAGAACATTCTAGCCCAGCCCACCGTCGGGCTTGCTGCCACTGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAACATTCTAGCCCAGCCCACCGTCGGGCTTGCTGCCACTGTCAC  600

seq1  TACAGAGAGGTGGTCCTTTTTCCTAGCTCTTCCTTTTACATCATTCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGAGGTGGTCCTTTTTCCTAGCTCTTCCTTTTACATCATTCAGAA  650

seq1  AGCAGCCTTGGGACAAAAGGTATCTGGAGTGTCCCTGTGAGCATTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTGGGACAAAAGGTATCTGGAGTGTCCCTGTGAGCATTTCAAA  700

seq1  CATTGTCACCATCTTAACGTATGAAGGAGAGTCCGCTACAGGAAGCTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCACCATCTTAACGTATGAAGGAGAGTCCGCTACAGGAAGCTACT  750

seq1  AAGTCAAGACCCGTTTCTGTCTGAGGCAGAAGTAGAGGACAGGTTTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGACCCGTTTCTGTCTGAGGCAGAAGTAGAGGACAGGTTTCCTG  800

seq1  GCTGACCATTGGGCATGCAGCCATTCCTTTAACTGGACTGTGACTTGGGC  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTGACCATTGGGCATGCAGCCATTTCTTTAACTGGACTGTGACTTGGGC  850

seq1  TTGGAGTGGCCCATCCTGATGTGACTCTAACCGGACATCGCGTCTTCACT  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGGAGTGGCCCATCCTGATGTGACTCTAA-CGGACATCGCGTCTTCACT  899

seq1  TAAAGCAGAGAGCACTAGGCTGGGTAGGCTGAGAAAAGCCATCATCTCTT  950
      ||||||||||||||||| ||| |||| ||||||||||| |||||||||||
seq2  TAAAGCAGAGAGCACTA-GCT-GGTA-GCTGAGAAAAG-CATCATCTCTT  945

seq1  ACATTATTATATCGCTAGTATTTTCTTTGTAGTCAGTTTTTTTTTTGTTG  1000
      ||| |||||||||||||||||||||||||||| |||||||||||||||  
seq2  ACA-TATTATATCGCTAGTATTTTCTTTGTAG-CAGTTTTTTTTTTGT--  991

seq1  TTGTTGTTTTGGGGTTTTTTT  1021
       ||||| ||||||||||||||
seq2  GTGTTG-TTTGGGGTTTTTTT  1011