BAC Information

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BAC

Clone NameB6Ng01-054K22
Chromosome10 (Build37)
Map Location 106,973,986 - 107,099,156
singlet/doubletdoublet
Overlap genePtprq
Upstream genePpfia2, 8430416H19Rik, Lin7a, Myf5, Myf6
Downstream geneEG628870, Ppp1r12a, Pawr, EG667814, Syt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054K22.bB6Ng01-054K22.g
ACCDH877361DH877362
length1,117285
definitionDH877361|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K22, 5' end.DH877362|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,973,986 - 106,975,105)(107,098,897 - 107,099,156)
sequence
gaattctttatgtgttctagtagtggataaggtgatttaagtggtgattc
ttctgaatcttctaatggtcttaggaggatcagacagacaaatggtttgt
tggtggtcacaaagagacacagccacaaaagagaattacttcccaggaag
ttttattatttttatcttaaccccaggacggaggcttgaggcatttagga
tccttgttgttttgaggttgaacatttataaccatcagatactcttggcc
tgtctcatcataaaagtaatatgggtatggattgaattttctttctgata
gaatgaggataattacccaagacctcattccaaatggatgaaacaatagc
acccaagaactcaaattttcatactttaagttcaaaatgccttagactta
tttgagttactttacacatgttgacacattgcaaatcagtccctcataat
gcaactagacatcaacattcgtgaactcatggtagtggcctttggatagg
aatataatatttatttacaaagagtgttaccccgataagcatgctgcaag
cagtctcaaagaaatgtagtggaaacacatctagcaacatgggcatgccc
acttaaacttaaggtgtgcccaacacaagtgaatgttcttaaagttagaa
tagaaagcatgctgagaaaggtcatgacttcagacatttagagactatca
gtcatatacggtacttgtcatcccacgggtttctcctcttgctgctgaag
tcatttccttatgatttattttgttgcagaaagaatctccaggagttaat
gctatttgttcttctttctattctgcttcctggacactgcaaggttgtgt
gggtcatagcctctgatatcgcagtcctctaaatctggttgcctttctga
ataatttatcctttagtatcaccctgtggtttttgttttgttttgttggt
tttttttgtttggtttggtttcccggttaaatacttatgggataatagtc
tcccctaaatagcatttttcaagacctggagaaatttccttaaaatgttt
attcatttgtggcgttggtttgtttgtttttattggagcactaaggggta
tgcaggttttggaacct
ctggactcaagtgattcttctgtctcaacttctctagtagctgggactac
atatgtgagccaccgtgcctggctatttgaaaattttaaaacaaatactt
tgcacaactattttcaagttaatttcaattaatttttttttatcatgatg
aaagtgaatttccattttcttgacacatggcaaggaacacttaaaaaata
aaataagtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gagagtgtgtgagtgggtgtgcgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106973986_106975105
seq2: B6Ng01-054K22.b_42_1158

seq1  GAATTCTTTATGTGTTCTAGTAGTGGATAAGGTGATTTAAGTGGTGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGTGTTCTAGTAGTGGATAAGGTGATTTAAGTGGTGATTC  50

seq1  TTCTGAATCTTCTAATGGTCTTAGGAGGATCAGACAGACAAATGGTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATCTTCTAATGGTCTTAGGAGGATCAGACAGACAAATGGTTTGT  100

seq1  TGGTGGTCACAAAGAGACACAGCCACAAAAGAGAATTACTTCCCAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCACAAAGAGACACAGCCACAAAAGAGAATTACTTCCCAGGAAG  150

seq1  TTTTATTATTTTTATCTTAACCCCAGGACGGAGGCTTGAGGCATTTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATTTTTATCTTAACCCCAGGACGGAGGCTTGAGGCATTTAGGA  200

seq1  TCCTTGTTGTTTTGAGGTTGAACATTTATAACCATCAGATACTCTTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTGTTTTGAGGTTGAACATTTATAACCATCAGATACTCTTGGCC  250

seq1  TGTCTCATCATAAAAGTAATATGGGTATGGATTGAATTTTCTTTCTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATCATAAAAGTAATATGGGTATGGATTGAATTTTCTTTCTGATA  300

seq1  GAATGAGGATAATTACCCAAGACCTCATTCCAAATGGATGAAACAATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGATAATTACCCAAGACCTCATTCCAAATGGATGAAACAATAGC  350

seq1  ACCCAAGAACTCAAATTTTCATACTTTAAGTTCAAAATGCCTTAGACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAACTCAAATTTTCATACTTTAAGTTCAAAATGCCTTAGACTTA  400

seq1  TTTGAGTTACTTTACACATGTTGACACATTGCAAATCAGTCCCTCATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTACTTTACACATGTTGACACATTGCAAATCAGTCCCTCATAAT  450

seq1  GCAACTAGACATCAACATTCGTGAACTCATGGTAGTGGCCTTTGGATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGACATCAACATTCGTGAACTCATGGTAGTGGCCTTTGGATAGG  500

seq1  AATATAATATTTATTTACAAAGAGTGTTACCCCGATAAGCATGCTGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATATTTATTTACAAAGAGTGTTACCCCGATAAGCATGCTGCAAG  550

seq1  CAGTCTCAAAGAAATGTAGTGGAAACACATCTAGCAACATGGGCATGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCAAAGAAATGTAGTGGAAACACATCTAGCAACATGGGCATGCCC  600

seq1  ACTTAAACTTAAGGTGTGCCCAACACAAGTGAATGTTCTTAAAGTTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAACTTAAGGTGTGCCCAACACAAGTGAATGTTCTTAAAGTTAGAA  650

seq1  TAGAAAGCATGCTGAGAAAGGTCATGACTTCAGACATTTAGAGACTATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCATGCTGAGAAAGGTCATGACTTCAGACATTTAGAGACTATCA  700

seq1  GTCATATACGGTACTTGTCATCCCACGGGTTTCTCCTCTTGCTGCTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATACGGTACTTGTCATCCCACGGGTTTCTCCTCTTGCTGCTGAAG  750

seq1  TCATTTCCTTATGATTTATTTTGTTGCAGAAAGAATCTCCAGGAGTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCTTATGATTTATTTTGTTGCAGAAAGAATCTCCAGGAGTTAAT  800

seq1  GCTATTTGTTCTTCTTTCTATTCTGCTTCCTGGACACTGCAAGGTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGTTCTTCTTTCTATTCTGCTTCCTGGACACTGCAAGGTTGTGT  850

seq1  GGGTCATAGCCTCTGATATCGCAGTCCTCTAAATCTGGTTGCCTTTCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATAGCCTCTGATATCGCAGTCCTCTAAATCTGGTTGCCTTTCTGA  900

seq1  ATAATTTATCCTTTAGTATCACCCTGTGGTTTTTTGTTTTGTTTTGTTGG  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATAATTTATCCTTTAGTATCACCCTGTGG-TTTTTGTTTTGTTTTGTTGG  949

seq1  TTTTTTTTTGTTTTGTTTTGTTTTCCTGTTTAAATTACTTATGGGATTAT  1000
       |||||||||||| |||| |||| || |||  || |||||||||||| ||
seq2  -TTTTTTTTGTTTGGTTTGGTTTCCCGGTT--AAATACTTATGGGATAAT  996

seq1  AGTCTCCTCTAAATTAGCATTTCTCAAGACCTGTAGAAATTTCTTTAATA  1050
      ||||||| ||||| |||||||| |||||||||| ||||||||| |||| |
seq2  AGTCTCCCCTAAA-TAGCATTTTTCAAGACCTGGAGAAATTTCCTTAAAA  1045

seq1  TGTTTATTCATTTGTGCAGTT-GTTTGTTTGTTTTTATTGGAGCACT-AG  1098
      ||||||||||||||||  ||| ||||||||||||||||||||||||| ||
seq2  TGTTTATTCATTTGTGGCGTTGGTTTGTTTGTTTTTATTGGAGCACTAAG  1095

seq1  GTGTATGCATGTTTTGAAACCT  1120
      | ||||||| |||||| |||||
seq2  GGGTATGCAGGTTTTGGAACCT  1117

seq1: chr10_107098897_107099156
seq2: B6Ng01-054K22.g_64_323 (reverse)

seq1  TCTCACACACACACACACACACACACACACACACACACATACACACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACACACACACACACACACACACACACACACACACATACACACACTT  50

seq1  ATTTTATTTTTTAAGTGTTCCTTGCCATGTGTCAAGAAAATGGAAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTTTAAGTGTTCCTTGCCATGTGTCAAGAAAATGGAAATTCA  100

seq1  CTTTCATCATGATAAAAAAAAATTAATTGAAATTAACTTGAAAATAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCATGATAAAAAAAAATTAATTGAAATTAACTTGAAAATAGTTG  150

seq1  TGCAAAGTATTTGTTTTAAAATTTTCAAATAGCCAGGCACGGTGGCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTATTTGTTTTAAAATTTTCAAATAGCCAGGCACGGTGGCTCAC  200

seq1  ATATGTAGTCCCAGCTACTAGAGAAGTTGAGACAGAAGAATCACTTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTCCCAGCTACTAGAGAAGTTGAGACAGAAGAATCACTTGAGT  250

seq1  CCAGGAATTC  260
      ||||||||||
seq2  CCAGGAATTC  260