BAC Information

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BAC

Clone NameB6Ng01-054M10
Chromosome10 (Build37)
Map Location 104,337,646 - 104,338,749
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573, BC067068, Ccdc59
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054M10.bB6Ng01-054M10.g
ACCDH877429DH877430
length1,2651,079
definitionDH877429|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M10, 5' end.DH877430|Mus musculus domesticus DNA, BAC clone: B6Ng01-054M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacatgagtcttttgcaaaagcaaccagtgccaattaactttgg
agtcatttctccagttctctttctcaacattcttgattatataagttatc
tgcacataaaatattagcccacaccttatttaaacattgaagatatatta
tctaagtttctgtgtagttgaatctaatcattactttgcatagttctctt
ggctccaacctataaggactgtgagcaaggtggcatccagagttgcattc
attgcaaggtttcaatggagatggggtaggggaacctgctttcaagctct
cttgtgatctcagcctgtgtttcagaggctctgtgttcctcaaagtggtc
cattttcttgccgtttttatcgggaggctgattgatatacaacagtttgc
ttcatcaagacaagggaacaaatggccatcttgccaaaagctatctacct
attcaatgcaattcccatcaaaatttcaactcaattcttcatagatttag
aaagagcaatttctaagttcatctggaataacaaaaaacccaggatagtg
aaaactattctcaatgaataaagaactgggggaatcaccatgcttgacct
caagctgtactacagagcaattgtgataaaaactgcaaggtattggtaca
gtgaaaggcaggtagatcaatgtagtagaattgaagatccagagatgaac
ccacacacctatggtcttttggtcattgacaaaggagctaaaacctggag
tttaaaacagtggaaaaaagacagcattttcaacgaatggtgatggctca
agtggtgtttagcatgtggaagaaggcaaatcgactcattctttcctcct
tgtacaaagctcaagtccaagtggatcaaggaccttcacataaaatcaga
gacactgaaacttatagaagagaaagtgggatggagcctcaaacatatgg
gcacaggggaaaaattcctgaacagaacacctatggcgtgtgatgtaaga
tcaagaattgacaatgggactcataaaattgcaaagcttctgtaagcaaa
ggacactgtcatagataaaagcacacaaattgggaaaagatcttcaccat
tctacatccatgaagaataatatcaatttttacaagacttaagaagttcg
agcttcaagaaacaactactattaaaaatgggtacgagctaaacaagatt
cacaggatcatgctgtaagcctagaatgtcaactctctgagtcactagga
agtgacgtacttgac

gaattcttagagtcatgtatgaatccttttatatcaactgcaaatggagt
tattttgccttcttcccttatctttgattccaatttgtatccctttgtta
tccctcagatatcttattgttctagttaagacttcaagaactatattgaa
taggtacagaacgaatggacagccttgtcttgttcctgattttaatggaa
ttgcttttagtttctctcaaattaacatgatgttgttataggtttgttgt
aagctgcctttattatgtttttttttttcctgaagaggacgtagattcaa
ttcctagtaaccacatggtgatttataaccatcactaactccagtttcaa
aaactgtgatactcttttgtgacttccacagtcatcaagcacatacatga
tgcatatatatacattccatcgaatcactcacaaaattagtaaatctaat
aaaatgtttaaaaatattcaagattttccattacaatttaaatgcatcat
ttcttttaattgttttatcctgtccatcttcttcctggattcctagtgct
agatgcaactgtataaaacagtgatactttatcagaaatcaatcatgtta
ttttcatatattatgcacaatataggccttaaaatactagtgaagagggg
atgttcctcccctcttgtctgtctcctcagagatgtggtaacacagcagc
tcttcctgatatgctattatttaaaaactgctcttgtcccagaactccaa
gaatattagatttagagtatgatggcctatttgatatttataatctcaat
tcaagcctgagatgcagcactgtctattctttgaacaactaactgagaaa
cactcacaatacagtgtcaaatcacgtaattacttttccagtaagagaca
ccatgagctatttttgatctctctcttactttcacattgtgaagtataaa
atcactattgatatccagaaaacactgtattttattttttgcattcctct
tattcactaatctttgtttgatactcaaatcactcaccttctttaaaatt
gttattccagggacgacatgatatgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104337646_104338749
seq2: B6Ng01-054M10.g_68_1146

seq1  GAATTCTTAGAGTCATGTATGAATCCTTTTATATCAACTGCAAATGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAGTCATGTATGAATCCTTTTATATCAACTGCAAATGGAGT  50

seq1  TATTTTGCCTTCTTCCCTTATCTTTGATTCCAATTTGTATCCCTTTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCCTTCTTCCCTTATCTTTGATTCCAATTTGTATCCCTTTGTTA  100

seq1  TCCCTCAGATATCTTATTGTTCTAGTTAAGACTTCAAGAACTATATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGATATCTTATTGTTCTAGTTAAGACTTCAAGAACTATATTGAA  150

seq1  TAGGTACAGAACGAATGGACAGCCTTGTCTTGTTCCTGATTTTAATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACAGAACGAATGGACAGCCTTGTCTTGTTCCTGATTTTAATGGAA  200

seq1  TTGCTTTTAGTTTCTCTCAAATTAACATGATGTTGTTATAGGTTTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTAGTTTCTCTCAAATTAACATGATGTTGTTATAGGTTTGTTGT  250

seq1  AAGCTGCCTTTATTATGTTTTTTTTTTTCCTGAAGAGGACGTAGATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCTTTATTATGTTTTTTTTTTTCCTGAAGAGGACGTAGATTCAA  300

seq1  TTCCTAGTAACCACATGGTGATTTATAACCATCACTAACTCCAGTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTAACCACATGGTGATTTATAACCATCACTAACTCCAGTTTCAA  350

seq1  AAACTGTGATACTCTTTTGTGACTTCCACAGTCATCAAGCACATACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGATACTCTTTTGTGACTTCCACAGTCATCAAGCACATACATGA  400

seq1  TGCATATATATACATTCCATCGAATCACTCACAAAATTAGTAAATCTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATATATACATTCCATCGAATCACTCACAAAATTAGTAAATCTAAT  450

seq1  AAAATGTTTAAAAATATTCAAGATTTTCCATTACAATTTAAATGCATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTAAAAATATTCAAGATTTTCCATTACAATTTAAATGCATCAT  500

seq1  TTCTTTTAATTGTTTTATCCTGTCCATCTTCTTCCTGGATTCCTAGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATTGTTTTATCCTGTCCATCTTCTTCCTGGATTCCTAGTGCT  550

seq1  AGATGCAACTGTATAAAACAGTGATACTTTATCAGAAATCAATCATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAACTGTATAAAACAGTGATACTTTATCAGAAATCAATCATGTTA  600

seq1  TTTTCATATATTATGCACAATATAGGCCTTAAAATACTAGTGAAGAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATATTATGCACAATATAGGCCTTAAAATACTAGTGAAGAGGGG  650

seq1  ATGTTCCTCCCCTCTTGTCTGTCTCCTCAGAGATGTGGTAACACAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTCCCCTCTTGTCTGTCTCCTCAGAGATGTGGTAACACAGCAGC  700

seq1  TCTTCCTGATATGCTATTATTTAAAAACTGCTCTTGTCCCAGAACTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGATATGCTATTATTTAAAAACTGCTCTTGTCCCAGAACTCCAA  750

seq1  GAATATTAGATTTAGAGTATGATGGCCTATTTGATATTTATAATCTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTAGATTTAGAGTATGATGGCCTATTTGATATTTATAATCTCAAT  800

seq1  TCAAGCCTGAGATGCAGCACTGTCTATTCTTTGAACAACTAACTGAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTGAGATGCAGCACTGTCTATTCTTTGAACAACTAACTGAGAAA  850

seq1  CACTCACAATACAGTGTCAAAATCACGTAATTACTTTTCCAGTAAGAGAC  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACTCACAATACAGTGTC-AAATCACGTAATTACTTTTCCAGTAAGAGAC  899

seq1  ACCATGAGCTATTTTTGAATCTCTCTCCTTAACTTTCACATTGTGAAGGT  950
      ||||||||||||||||| |||||||||  | |||||||||||||||| ||
seq2  ACCATGAGCTATTTTTG-ATCTCTCTC--TTACTTTCACATTGTGAA-GT  945

seq1  ATAAAATCACTATTGATATCCAGAAAACACTGTATTTTAATTTTTTTGCA  1000
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  ATAAAATCACTATTGATATCCAGAAAACACTGTATTTTA--TTTTTTGCA  993

seq1  TTCCTCTTAATTCTACTAATCTTTTGTTTTGATACTCAATATCACTCACC  1050
      |||||||| |||| ||||||||||   |||||||||||| ||||||||||
seq2  TTCCTCTT-ATTC-ACTAATCTTT--GTTTGATACTCAA-ATCACTCACC  1038

seq1  TTCTTTTACAATAATTTGTTTATTCCAAGGGAAAACAGAACATGATAATG  1100
      ||||||    | ||||   |||||||| ||      |  ||||||| |||
seq2  TTCTTT----AAAATT--GTTATTCCAGGG------ACGACATGAT-ATG  1075

seq1  TTCT  1104
      ||||
seq2  TTCT  1079


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