BAC Information

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BAC

Clone NameB6Ng01-055H07
Chromosome10 (Build37)
Map Location 123,671,274 - 123,672,283
singlet/doubletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416, Slc16a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055H07.bB6Ng01-055H07.g
ACCDH877900DH877901
length1591,008
definitionDH877900|Mus musculus domesticus DNA, BAC clone: B6Ng01-055H07, 5' end.DH877901|Mus musculus domesticus DNA, BAC clone: B6Ng01-055H07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tacactaaatccacctggccctgggttttgttgtttgtttgttttttgtt
tgtttgttggttttggggggttgttggttgtttttttttttaattcggaa
ggtttttaatggcttcttatatttccttgtgtgaaatgggcctttttata
aagtttacc
gaattcaggcagtgtgggattagtttcaacaggtttttttttaagggaaa
cgtgcagagacacttggatttataatactgaattacagacaactgatttt
tacaaaggtgcaacagaattcaatgcattaggcacaggctttgctcagtg
tgttacctgtagcagaataacacagaaacaatagaaacctggaggtctta
taatgccatggcattgactgtacctaacatattgatgccatcattcaaac
tgggaagagaacattttgatggaaaatggacatgattgcattaaaaactt
acaaatgttgcatatatttataaaactgaaagaatagataagtaacgtga
aattattattaaattgttcaaaatacagtaaaaagaaaaaagttaaaaaa
aagaagtcacacaggcaaagattactattcatagcccagaaattataaca
ttctatttagaatttcagaagaaaagtaaataaaaattattatttacaaa
gaggatggtattaaaaacaaacaaatgagagaaaacacatagtttttttt
caccatccatgagacccaaaagtttaacccttgcaagaccatgatctagg
gagaaatccttcttgccctttgttaacttgagtttgccagcaacattcaa
tgtgttttgtcttatagaggcaatactcaatgtcaccctgtgttacttag
tctcttttcttctctttaaaagataaaaccagtacatactcttttttttt
aatttatttatttattttttctggatactgctttatagtctttttttttt
ccattttttattaggtatttagctcatttacatttccaatgctataccaa
aagtcccccatacccacccaccctcactcccctacccacccactccccca
ttttgggccctggcgttcccttgtactgagggcataaaagctagcaaacc
aaatgagctctcttttcagtgatggccgactaggcatctctatatctatg
cagctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123671274_123672283
seq2: B6Ng01-055H07.g_70_1077

seq1  GAATTCAGGCAGTGTGGGATTAGTTTCAACAGGTTTTTTTTTAAGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGTGTGGGATTAGTTTCAACAGGTTTTTTTTTAAGGGAAA  50

seq1  CGTGCAGAGACACTTGGATTTATAATACTGAATTACAGACAACTGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCAGAGACACTTGGATTTATAATACTGAATTACAGACAACTGATTTT  100

seq1  TACAAAGGTGCAACAGAATTCAATGCATTAGGCACAGGCTTTGCTCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGGTGCAACAGAATTCAATGCATTAGGCACAGGCTTTGCTCAGTG  150

seq1  TGTTACCTGTAGCAGAATAACACAGAAACAATAGAAACCTGGAGGTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCTGTAGCAGAATAACACAGAAACAATAGAAACCTGGAGGTCTTA  200

seq1  TAATGCCATGGCATTGACTGTACCTAACATATTGATGCCATCATTCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCATGGCATTGACTGTACCTAACATATTGATGCCATCATTCAAAC  250

seq1  TGGGAAGAGAACATTTTGATGGAAAATGGACATGATTGCATTAAAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAGAACATTTTGATGGAAAATGGACATGATTGCATTAAAAACTT  300

seq1  ACAAATGTTGCATATATTTATAAAACTGAAAGAATAGATAAGTAACGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTTGCATATATTTATAAAACTGAAAGAATAGATAAGTAACGTGA  350

seq1  AATTATTATTAAATTGTTCAAAATACAGTAAAAAGAAAAAAGTTAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTATTAAATTGTTCAAAATACAGTAAAAAGAAAAAAGTTAAAAAA  400

seq1  AAGAAGTCACACAGGCAAAGATTACTATTCATAGCCCAGAAATTATAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCACACAGGCAAAGATTACTATTCATAGCCCAGAAATTATAACA  450

seq1  TTCTATTTAGAATTTCAGAAGAAAAGTAAATAAAAATTATTATTTACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTAGAATTTCAGAAGAAAAGTAAATAAAAATTATTATTTACAAA  500

seq1  GAGGATGGTATTAAAAACAAACAAATGAGAGAAAACACATAGTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGGTATTAAAAACAAACAAATGAGAGAAAACACATAGTTTTTTTT  550

seq1  CACCATCCATGAGACCCAAAAGTTTAACCCTTGCAAGACCATGATCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCATGAGACCCAAAAGTTTAACCCTTGCAAGACCATGATCTAGG  600

seq1  GAGAAATCCTTCTTGCCCTTTGTTAACTTGAGTTTGCCAGCAACATTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCCTTCTTGCCCTTTGTTAACTTGAGTTTGCCAGCAACATTCAA  650

seq1  TGTGTTTTGTCTTATAGAGGCAATACTCAATGTCACCCTGTGTTACTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTGTCTTATAGAGGCAATACTCAATGTCACCCTGTGTTACTTAG  700

seq1  TCTCTTTTCTTCTCTTTAAAAGATAAAACCAGTACATACTCTTTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCTTCTCTTTAAAAGATAAAACCAGTACATACTCTTTTTTTTT  750

seq1  AATTTATTTATTTATTTTTTCTGGATACTGCTTTATAGTC-TTTTTTTTT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATTTATTTATTTATTTTTTCTGGATACTGCTTTATAGTCTTTTTTTTTT  800

seq1  CCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAA  850

seq1  AAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCA  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTCCCCCATACCCACCCACCCTCACTCCCCTACCCACCCACTCCCCCA  900

seq1  TTTT-GGCCCTGGCGTTCCCCTGTACTG-GGGCATATAAAGTTTGCAAGT  947
      |||| ||||||||||||||| ||||||| ||||||| |||| | ||||  
seq2  TTTTGGGCCCTGGCGTTCCCTTGTACTGAGGGCATA-AAAGCTAGCAAAC  949

seq1  CCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTAATAC  997
      | |||| | |||||||| |||||||||||||||||| ||||| |  ||| 
seq2  CAAATGAG-CTCTCTTTTCAGTGATGGCCGACTAGG-CATCTCT--ATAT  995

seq1  ATATGCAGCTAGA  1010
       ||||||||||||
seq2  CTATGCAGCTAGA  1008