BAC Information

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BAC

Clone NameB6Ng01-056H03
Chromosome10 (Build37)
Map Location 112,220,400 - 112,221,347
singlet/doubletsinglet
Overlap genenone
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
Downstream geneLOC100042639, 4921506J03Rik, LOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056H03.bB6Ng01-056H03.g
ACCDH878598DH878599
length1,161952
definitionDH878598|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H03, 5' end.DH878599|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactaggcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgaagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tgagagctagagaaagtacccagagctaaagggatcttcaaccctataag
gtggaacaacattatggactaccagtaccctgagctcttgactctagctg
catatgtatcaaagatgcctagtcgccatcactggaaaggaggccaattg
atacgcgaactttgatgtgctcgtacaggggaacgccaaggctaaaagga
agtaattgtag
gaattctaccttgccagagttgttattacagttacatgaattttaaatat
catcactactgaaagaataaataaaaatactattttgttttggtacttaa
atttgggatgaaaaatacttttaaatttgatagagttgagcattttatta
caatgtgttatagttcaccagtgttgagactggagatatggctcagcggt
taagagcatagactgcttttccagaggtgataggttcaattccctgcaac
cacatggtggctcaaaaccatctgtaatggtatctgatgccctatgctgg
tttgtctgaggacagctacactgtactcatatacactaattaattaatta
attaattattcacccgtgtgagaaatacaaaagaagtatgtgtactgcaa
aatcaaacttgtccatggtaacttttaaaaggtgacagaagtgattcaaa
tactttacaaatacatgaaatgtttttggaaatttttctaggcatatatt
atttctaaaactgtacacatattaaacaaccatgacaaactaaacttatg
gagcttttgattggatggctcatacttggttggggtttgaatatagggtg
agaaaaagaccaaagtcatgtaaggagtttaaaatcaggtactctaaccc
cccacccccacccccaagtgatggttcttctcaaagatggctacatagtt
tgagagcttttgaagccgtaccccttctcagatctcagtcccacagattt
taatagattggaattagtgtttcggaagttaacactgactagcccagtca
aaactcccaagcagatttaagaaggtagcgtgttttgatttccaagtaaa
atatacagatcaagtttctttcttcccactcatgattttagtcagcatca
ctttaggtattattctcagtggtataacctgagtgcttaatactcagttt
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112220400_112221347
seq2: B6Ng01-056H03.g_70_1021 (reverse)

seq1  GCAAACTGAGTATTAAGCACTCAGG-TATACCACTGAGAATAATAACTAA  49
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  GCAAACTGAGTATTAAGCACTCAGGTTATACCACTGAGAATAATACCTAA  50

seq1  AGTGATGCTGACTAAAATCATGAGTGGGAAGAAAGAAACCTGATCTGTAT  99
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTGATGCTGACTAAAATCATGAGTGGGAAGAAAGAAACTTGATCTGTAT  100

seq1  ATTTCACTTGGAAATCAAAACACGCTACCTTC-TAAATCTGCTTGGGAGT  148
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTTTACTTGGAAATCAAAACACGCTACCTTCTTAAATCTGCTTGGGAGT  150

seq1  TTTGACTGGGCTAGTCAGTGTTAACTTCCGAAACACTAATTCCAATCTAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGGGCTAGTCAGTGTTAACTTCCGAAACACTAATTCCAATCTAT  200

seq1  TAAAATCTGTGGGACTGAGATCTGAGAAGGGGTACGGCTTC-AAAGCTCT  247
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAAAATCTGTGGGACTGAGATCTGAGAAGGGGTACGGCTTCAAAAGCTCT  250

seq1  CAAACTATGTAGCCATCTTTGAGAAGAACCATCACTTGGGGGTGGGGGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATGTAGCCATCTTTGAGAAGAACCATCACTTGGGGGTGGGGGTG  300

seq1  GGGGGTTAGAGTACCTGATTTTAAACTCCTTACATGACTTTGGTC-TTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGGGTTAGAGTACCTGATTTTAAACTCCTTACATGACTTTGGTCTTTTT  350

seq1  CTCACCCTATATTCAAACCCCAACCAAGTATGAGCCATCCAATCAAAAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCTATATTCAAACCCCAACCAAGTATGAGCCATCCAATCAAAAGC  400

seq1  TCCATAAGTTTAGTTTGTCATGGTTGTTTAATATGTGTACAGTTTTAGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAGTTTAGTTTGTCATGGTTGTTTAATATGTGTACAGTTTTAGAA  450

seq1  ATAATATATGCCTAGAAAAATTTCCAAAAACATTTCATGTATTTGTAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATGCCTAGAAAAATTTCCAAAAACATTTCATGTATTTGTAAAG  500

seq1  TATTTGAATCACTTCTGTCACCTTTTAAAAGTTACCATGGACAAGTTTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAATCACTTCTGTCACCTTTTAAAAGTTACCATGGACAAGTTTGA  550

seq1  TTTTGCAGTACACATACTTCTTTTGTATTTCTCACACGGGTGAATAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGTACACATACTTCTTTTGTATTTCTCACACGGGTGAATAATTA  600

seq1  ATTAATTAATTAATTAGTGTATATGAGTACAGTGTAGCTGTCCTCAGACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAATTAATTAGTGTATATGAGTACAGTGTAGCTGTCCTCAGACA  650

seq1  AACCAGCATAGGGCATCAGATACCATTACAGATGGTTTTGAGCCACCATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCATAGGGCATCAGATACCATTACAGATGGTTTTGAGCCACCATG  700

seq1  TGGTTGCAGGGAATTGAACCTATCACCTCTGGAAAAGCAGTCTATGCTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCAGGGAATTGAACCTATCACCTCTGGAAAAGCAGTCTATGCTCT  750

seq1  TAACCGCTGAGCCATATCTCCAGTCTCAACACTGGTGAACTATAACACAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCGCTGAGCCATATCTCCAGTCTCAACACTGGTGAACTATAACACAT  800

seq1  TGTAATAAAATGCTCAACTCTATCAAATTTAAAAGTATTTTTCATCCCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAAATGCTCAACTCTATCAAATTTAAAAGTATTTTTCATCCCAA  850

seq1  ATTTAAGTACCAAAACAAAATAGTATTTTTATTTATTCTTTCAGTAGTGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTACCAAAACAAAATAGTATTTTTATTTATTCTTTCAGTAGTGA  900

seq1  TGATATTTAAAATTCATGTAACTGTAATAACAACTCTGGCAAGGTAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTAAAATTCATGTAACTGTAATAACAACTCTGGCAAGGTAGAAT  950

seq1  TC  948
      ||
seq2  TC  952