BAC Information

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BAC

Clone NameB6Ng01-057F10
Chromosome10 (Build37)
Map Location 74,156,338 - 74,157,335
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh15
Downstream geneEG630453, EG623346, Gnaz, LOC100040057, Rab36, Bcr, Specc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057F10.bB6Ng01-057F10.g
ACCDH879238DH879239
length1,120992
definitionDH879238|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F10, 5' end.DH879239|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gatcataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttcctcttc
tgagatcttctttaatttctttcttcagagacttgaagttttatcataca
gatctttcactttctagtagaagtcacgccgagatattttatataattgt
gactattgagaaggtgttgtttccctaattctttctcagctgttatcttg
tgtaagaaaggccattgactgctgagtaattttatctcacctacttcaca
caactggttatcaggctagaagtccttgggggaatacttgggcccttatt
tactggtcacatctctgcga
gaattccatgcacatgagctacagtgtcaagtattgacaaaagactcaga
tgtacggctggagtttttcagcaccagtgactttattaaacaacacagaa
aaaccaaaggtaactatttttatccctctacagtaacttcagactgtgat
ttctctggcaaattaagacagccttcgaagaatctacaagtttagataat
gtcagggtaaatgataactgaagtaagctggcccagttatttgtaattaa
attatacaatgttataattttaagatgataatctccaagatgctgtcaaa
tctctttatgaattatggaaggtaaaataatacaaacctgctgaaactaa
tgattgattatctttctccttgtttgacacagattgcatgtatctaatta
gggaagttgagctgccataatcgcagcttctatcttgttgtaaagctgct
tatattattaaatctggacttggtgaccaagatgagggagtgagcatttt
acataggcgaagtttatgtgggtggaaacgtaatctacaaatgaggcgat
ttttacaaagaaaagcagattcaaggaaaagagaagtttcactcttgtac
aattcatcagcttcctgtttaattcttaggcaagttatacgagcaatcct
agctcagatcacttaaaacttcttcctttgacatacatatttatagtttc
aaagggaacctttctttatgaagaaaatctaagtaaaccatgtacatggg
ataagaacaaggatttgaattggttttgggggggcttggttcttactttt
ggctctctctttatctgggttttattcactgcgtgggtaatctgacaact
atttcttgatgagctggccctgtgagatacttgttcatgctagcaaaact
gagcattgataaacaaggtacaaaaattcctgaccctcacttcttccctg
tatcatatagtgatatgtgtgtgtgttgtgtgtgatgcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_74156338_74157335
seq2: B6Ng01-057F10.g_67_1057

seq1  GAATTCCATGCACATGAGCTACAGTGTCAAGTATTGACAAAAGACTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCACATGAGCTACAGTGTCAAGTATTGACAAAAGACTCAGA  50

seq1  TGTACGGCTGGAGTTTTTCAGCACCAGTGACTTTATTAAACAACACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGGCTGGAGTTTTTCAGCACCAGTGACTTTATTAAACAACACAGAA  100

seq1  AAACCAAAGGTAACTATTTTTATCCCTCTACAGTAACTTCAGACTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAGGTAACTATTTTTATCCCTCTACAGTAACTTCAGACTGTGAT  150

seq1  TTCTCTGGCAAATTAAGACAGCCTTCGAAGAATCTACAAGTTTAGATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGCAAATTAAGACAGCCTTCGAAGAATCTACAAGTTTAGATAAT  200

seq1  GTCAGGGTAAATGATAACTGAAGTAAGCTGGCCCAGTTATTTGTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGTAAATGATAACTGAAGTAAGCTGGCCCAGTTATTTGTAATTAA  250

seq1  ATTATACAATGTTATAATTTTAAGATGATAATCTCCAAGATGCTGTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAATGTTATAATTTTAAGATGATAATCTCCAAGATGCTGTCAAA  300

seq1  TCTCTTTATGAATTATGGAAGGTAAAATAATACAAACCTGCTGAAACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATGAATTATGGAAGGTAAAATAATACAAACCTGCTGAAACTAA  350

seq1  TGATTGATTATCTTTCTCCTTGTTTGACACAGATTGCATGTATCTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATTATCTTTCTCCTTGTTTGACACAGATTGCATGTATCTAATTA  400

seq1  GGGAAGTTGAGCTGCCATAATCGCAGCTTCTATCTTGTTGTAAAGCTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTTGAGCTGCCATAATCGCAGCTTCTATCTTGTTGTAAAGCTGCT  450

seq1  TATATTATTAAATCTGGACTTGGTGACCAAGATGAGGGAGTGAGCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATTAAATCTGGACTTGGTGACCAAGATGAGGGAGTGAGCATTTT  500

seq1  ACATAGGCGAAGTTTATGTGGGTGGAAACGTAATCTACAAATGAGGCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGCGAAGTTTATGTGGGTGGAAACGTAATCTACAAATGAGGCGAT  550

seq1  TTTTACAAAGAAAAGCAGATTCAAGGAAAAGAGAAGTTTCACTCTTGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAAGAAAAGCAGATTCAAGGAAAAGAGAAGTTTCACTCTTGTAC  600

seq1  AATTCATCAGCTTCCTGTTTAATTCTTAGGCAAGTTATACGAGCAATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCAGCTTCCTGTTTAATTCTTAGGCAAGTTATACGAGCAATCCT  650

seq1  AGCTCAGATCACTTAAAACTTCTTCCTTTGACATACATATTTATAGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGATCACTTAAAACTTCTTCCTTTGACATACATATTTATAGTTTC  700

seq1  AAAGGGAACCTTTCTTTATGAAGAAAATCTAAGTAAACCATGTACATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAACCTTTCTTTATGAAGAAAATCTAAGTAAACCATGTACATGGG  750

seq1  ATAAGAACAAGGATTTGAATTGGTTTTGGGGGGGCTTGGTTCTTACTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACAAGGATTTGAATTGGTTTTGGGGGGGCTTGGTTCTTACTTTT  800

seq1  GGCTCTCTCTTTATCTGGGTTTTATTCACTGCGTGGGTAATCTGACAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTCTTTATCTGGGTTTTATTCACTGCGTGGGTAATCTGACAACT  850

seq1  ATTTCTTGATGAGCTGGCCCTGTGAGATACTTGTTCATGCTAGCAGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTCTTGATGAGCTGGCCCTGTGAGATACTTGTTCATGCTAGCA-AAAC  899

seq1  TGAGCATTGATAAACAAGGTACAAAAATTTCCTGACCCTCAACTTCTTCC  950
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TGAGCATTGATAAACAAGGTACAAAAA-TTCCTGACCCTC-ACTTCTTCC  947

seq1  CTGTATTCATATAGTGTATATGTGTGTGTGTTTGTGTGTGTATGCAAA  998
      ||||| |||||||||| ||||||||||||| ||||||||| |||||||
seq2  CTGTA-TCATATAGTG-ATATGTGTGTGTG-TTGTGTGTG-ATGCAAA  991