BAC Information

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BAC

Clone NameB6Ng01-057L14
Chromosome10 (Build37)
Map Location 88,366,850 - 88,367,977
singlet/doubletsinglet
Overlap geneSlc5a8
Upstream geneIgf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic, EG237433, Arl1, Utp20
Downstream geneTmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, Anks1b, LOC100043039
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057L14.bB6Ng01-057L14.g
ACCDH879508DH879509
length1,0271,092
definitionDH879508|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L14, 5' end.DH879509|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttctgctctgagccccacttttaagggggttatttgattt
tctggagtccaccctcttgagttttttatatatattggatattagtcccc
tatctgatttaagataggtaaagatacgttcccaatctgttggtggtctt
tttgtcttattgatggtgtcttttgccttgcagaaactttgcagtttcat
gaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgttc
tattcaggaatttttccctgtgcccatatcttcgagacttttccccactt
tctcctctataagtttcagtgtctctggttttatgtgaagttccttgatc
cacttagatttgaccttagtacaaggagagaggaatgggtcgattcgcat
tcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattgatc
tacttgtctgtcactataccagtaccatgcagtttttataataattgctc
tgtagtaaagctttaggtcaggcatggtgattccaccagaggtactttta
tccttgagaagagcttttgctatccctaggtttttgttattctagatgaa
tttgcagattgctctttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgctttggcaagatagccatttttt
acaatgttgatctgccaatccatgagcatgggagattctttcatcttctg
agagctcttttatttctttcttcagggacttgaagtttttatcatacaga
tcttttcacttccttagtagagtctactagaattttattttattggacat
tgaaaggtgttgttacctattccttgtcacctgttatccttgtaaataaa
ggccattgactgttgagttattttata
gaattcttttggctcttgatttctcttggttaatgcagttgataactctc
cacagaagaaagaggaggggcaccaagggtcttggaatttgatgtaagat
tccaggccatgggatagaggctctcagttttacagttttcaaggtcgtat
ttaagtaaaggcgaaaagacttctccctcccaaatacgacacattgaaaa
tagttgagagatacttcaaatggaagtggaactttttctgatagtatttt
gagcttgtatgactgccaagaagtgcatttaaatggttagcatttaactt
atacacaaaaaattccaagaaagcatagttataatgccctgctaatttta
acaagtatatatctttagagtgtattgacctcttaagcttaactttgctt
agacatatgctagattaggaattatgtccacacaatgtgctaaattgtat
ttattttggtatgatatctatttacatagtatactttgaatccctccccc
accagtcgccaacatagcatggccaatttgcctaataatagcttcctaag
actatgggagaacaatttatctatatgttccaaatgataagaacaagtat
ttttcttctaatttcatctagaatctcctaatatctggaaatatcattgt
ttacttacttgaattaatttaaactataaacatttgtattttgacattat
aagtttggacatttttatatatgtctgtgagtgtgtattgcttgagtgtt
ctagaactttcttcagtctcttgtgaacaagttgtatttgcttccatttt
cttttcatgcagttttgatcctaaccctttgcaaagacacacgttctgga
caattgtcattggagggacttttacctggaccaccatctatggtgcaacc
agtccaagtgcagagatatatttcctgtaaaacagactccatgcaaactg
taagcaaacttggtgtatgaatcataaactacattgttctatggaatgtt
catagtcactttgtcaactttagtcttgtagtaactccaagatacgatca
gcatggcaggggtgatcagtgccagcctagtgtactagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_88366850_88367977
seq2: B6Ng01-057L14.g_70_1161

seq1  GAATTCTTTTGGCTCTTGATTTCTCTTGGTTAATGCAGTTGATAACTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGCTCTTGATTTCTCTTGGTTAATGCAGTTGATAACTCTC  50

seq1  CACAGAAGAAAGAGGAGGGGCACCAAGGGTCTTGGAATTTGATGTAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGAAAGAGGAGGGGCACCAAGGGTCTTGGAATTTGATGTAAGAT  100

seq1  TCCAGGCCATGGGATAGAGGCTCTCAGTTTTACAGTTTTCAAGGTCGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCATGGGATAGAGGCTCTCAGTTTTACAGTTTTCAAGGTCGTAT  150

seq1  TTAAGTAAAGGCGAAAAGACTTCTCCCTCCCAAATACGACACATTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAAGGCGAAAAGACTTCTCCCTCCCAAATACGACACATTGAAAA  200

seq1  TAGTTGAGAGATACTTCAAATGGAAGTGGAACTTTTTCTGATAGTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAGAGATACTTCAAATGGAAGTGGAACTTTTTCTGATAGTATTTT  250

seq1  GAGCTTGTATGACTGCCAAGAAGTGCATTTAAATGGTTAGCATTTAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTATGACTGCCAAGAAGTGCATTTAAATGGTTAGCATTTAACTT  300

seq1  ATACACAAAAAATTCCAAGAAAGCATAGTTATAATGCCCTGCTAATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAAAAATTCCAAGAAAGCATAGTTATAATGCCCTGCTAATTTTA  350

seq1  ACAAGTATATATCTTTAGAGTGTATTGACCTCTTAAGCTTAACTTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATATATCTTTAGAGTGTATTGACCTCTTAAGCTTAACTTTGCTT  400

seq1  AGACATATGCTAGATTAGGAATTATGTCCACACAATGTGCTAAATTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATGCTAGATTAGGAATTATGTCCACACAATGTGCTAAATTGTAT  450

seq1  TTATTTTGGTATGATATCTATTTACATAGTATACTTTGAATCCCTCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGGTATGATATCTATTTACATAGTATACTTTGAATCCCTCCCCC  500

seq1  ACCAGTCGCCAACATAGCATGGCCAATTTGCCTAATAATAGCTTCCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCGCCAACATAGCATGGCCAATTTGCCTAATAATAGCTTCCTAAG  550

seq1  ACTATGGGAGAACAATTTATCTATATGTTCCAAATGATAAGAACAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGGAGAACAATTTATCTATATGTTCCAAATGATAAGAACAAGTAT  600

seq1  TTTTCTTCTAATTTCATCTAGAATCTCCTAATATCTGGAAATATCATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTAATTTCATCTAGAATCTCCTAATATCTGGAAATATCATTGT  650

seq1  TTACTTACTTGAATTAATTTAAACTATAAACATTTGTATTTTGACATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTACTTGAATTAATTTAAACTATAAACATTTGTATTTTGACATTAT  700

seq1  AAGTTTGGACATTTTTATATATGTCTGTGAGTGTGTATTGCTTGAGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGACATTTTTATATATGTCTGTGAGTGTGTATTGCTTGAGTGTT  750

seq1  CTAGAACTTTCTTCAGTCTCTTGTGAACAAGTTGTATTTGCTTCCATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTTTCTTCAGTCTCTTGTGAACAAGTTGTATTTGCTTCCATTTT  800

seq1  CTTTTCATGCAGTTTTGATCCTAACCCTTTGCAAAGACACACGTTCTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATGCAGTTTTGATCCTAACCCTTTGCAAAGACACACGTTCTGGA  850

seq1  CAATTGTCATTGGAGGGACTTTTACCTGGACCACCATCTATGGTGTCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAATTGTCATTGGAGGGACTTTTACCTGGACCACCATCTATGGTG-CAAC  899

seq1  CAGTCCCAAGTGCAGAGATATATTTCCTGTAAAAGCAGACTCCATGCAAA  950
      |||| ||||||||||||||||||||||||||||| |||||||||||| ||
seq2  CAGT-CCAAGTGCAGAGATATATTTCCTGTAAAA-CAGACTCCATGC-AA  946

seq1  ACTGTAAGCCAAACTGTGGTGTATGAATCATTAATAACTACCATTGTTCT  1000
      |||||||| |||||| |||||||||||||||    ||||| |||||||| 
seq2  ACTGTAAG-CAAACT-TGGTGTATGAATCAT---AAACTA-CATTGTTC-  989

seq1  TATGGGAATGTTTCTATAAGTCAACTTTAGTTCAACTTTAGGTCTTTGTA  1050
      ||| ||||||||  |   |||| |||||   ||||||||| ||||   | 
seq2  TAT-GGAATGTTCAT---AGTC-ACTTT--GTCAACTTTA-GTCT---TG  1028

seq1  TAGTAAAACTCCAAGTATAAATGATCAGCAATGGCAGGTGGGTGATTCAG  1100
      ||||  |||||||||   | | ||||||| |||||||  |||||| ||||
seq2  TAGT--AACTCCAAG---ATACGATCAGC-ATGGCAG--GGGTGA-TCAG  1069

seq1  TTGCAGAGCCCAAAGTGGTACTAGATGT  1128
      |  |||    |  ||| |||||||||||
seq2  TGCCAG----CCTAGT-GTACTAGATGT  1092