BAC Information

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BAC

Clone NameB6Ng01-058L16
Chromosome10 (Build37)
Map Location 104,053,911 - 104,054,428
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058L16.bB6Ng01-058L16.g
ACCDH880227DH880228
length9541,232
definitionDH880227|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L16, 5' end.DH880228|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagattcaagaaggtggactccagaaaatcaaataacccca
ttaaaaatggggctcagagctaaacaaagaattctcacctgaggaataat
gaacagctgagaagcacctgaaaaaatgttctgcatcattaatcatcagg
gaaatgcaaatcaaaacaaccctgagattctacctcacaccagtcagaat
ggctatgatcaaaaatttaggtgacagcagatgctggcgaggatgtggag
aaagaggaacactcctccattgttggtgggattctaagcttgtacaatga
ctctggaaatagtctggaaattcctcagaaaattggacatagtactactg
gaggatcccgcaatacctctcctgggcatatatccagatgatgttccaac
cggcaagaaggagacatgctcctctatgttcatagcagccttatttataa
tagccagaagctggaaagaacccagatgcccctcaacagaggaatgtata
cagaaaatgtggtacatttacccaatggagtactacttagctgttaaaaa
gaatgaatttatgaaattcctaggcaaattgatggacttagaaggcatca
tcctgtgtgaggtaacccaatcacaaaataactcacatgatatgtactca
ctgataagtggatattagctcagaaactgagaatacccaagatataagaa
acaatttgcaaaacacatgaaactcaagaataacgaagaccaaactgtgg
acacaaatttctttatagcacacttttgtgaagacacaaactgtgcccct
tcttagagttgggaacaaaacacccatggaaagagttacagagacaaagt
ttggagctgtgtcaaaaggatggaccatctagagactggtataccaggga
tccatcccatatcagcctccaaatgctgacaccattgcatacactagcag
attt

gaattccagttaggatcatgaaagaaagaccactcttgaccctgtagaaa
cttaaaaagaacactaagtattattatgaaagttgtaagccaaatattag
aaaacctattggaaaaaagaatctgagaaaatattaagtatcaaatagtg
taaaaagaaagcaagagatctgtaacaagagattgaaacagtaataagaa
ttatttgaaggaaaagccaagctcagatgtctttactcataaactctacc
aaacttttgcatggtaattaacacttcacagattctttcctgccacagtg
aaagtcacttcacagctctttcagaggtcagctgtgatacacctacagac
aagacaagaaacaaatcctagtggccaatattccctataaatataagtac
ataattactttagaaaatgctatttaactaaactcagcagcatattaaag
aaatcacatgctttgtggaataaaatttgtctccagaatgaaagcaacct
tcagcatatgataatcagttaatatgacactcatctcctcaaaatatcta
agatggaacccactttctacgaaattactatttacttaactataaataac
aattctataatttaaaaccatcacagaaaacaacatagaaactctgtgac
ttcaataaaggcccttcacaaatgtcctttaagcaacactgtatcttaag
agcaaaaattttaagatgaagaacaggacaagaatgtgtttctctgcttc
aaccactttctcctgggagtcttacccaaagcaataagacaagacaagga
aacaacagatacaaaaaagaaaaagaaaaaaaaactggaaagaaataaag
gaaagtagcttgattatagatgatatgaacatcctaaagggtcacagaaa
caatggactacaaaggatttattaagcatgattggggttgtagtcatcta
attttatttgacaatctgatacctgagagaagtctcagtcagagtgctaa
tagtgatttgggtgtgtagtttgaaggaatatattgatctgtactgaggt
agaaaatgtggccactggggggggcactgtgaatttggataggactttgc
ctcaattctgtgctacttccagtgatgacatatgctggatgcaacaagaa
cttattggcgaattcacaggataagctggcaagcaggtcaacacggtatt
gtgaatctagaactgaacatactggagatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054428
seq2: B6Ng01-058L16.b_61_576 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||| ||||||||||||||||||||||||  |||||||||||||||
seq2  CTCCATTGGGTAAATGTACCACATTTTCTGTATACATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || |||| ||||||||| |||||||| ||||||||  |||| ||||||||
seq2  AACATAGAGGAGCATGTCTCCTTCTTGCCGGTTGGAACATCATCTGGATA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||||||||| ||||||||||| ||||||||| ||||||||||||||||||
seq2  TATGCCCAGGAGAGGTATTGCGGGATCCTCCAGTAGTACTATGTCCAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| |||   ||||||  |||||||||||  |||||||||| |  ||
seq2  TTCTGAGGAATTTCCAGAC-TATTTCCAGAGTCATTGTACAAGCTTAGAA  249

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  299

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TCTGCTGTCACCTAAATTTTTGATCATAGCCATTCTGACTGGTGTGAGGT  349

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
       |||||||||||||||||||||||||||||||||||||||||| ||||  
seq2  AGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAATGATGCA  399

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  450
      ||||||||||||||||||||||| ||  |||  |||||||||||||||||
seq2  GAACATTTTTTCAGGTGCTTCTCAGCTGTTCATTATTCCTCAGGTGAGAA  449

seq1  TTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTC  500
      ||||||||| || ||||||||||| |||||||| ||||||||||||||||
seq2  TTCTTTGTTTAGCTCTGAGCCCCA-TTTTTAATGGGGTTATTTGATTTTC  498

seq1  TGAAGTCCACCTTCTTGA  518
      || |||||||||||||||
seq2  TGGAGTCCACCTTCTTGA  516


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