BAC Information

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BAC

Clone NameB6Ng01-058O07
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,903 - 104,054,36391,364,071 - 91,365,232
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058O07.bB6Ng01-058O07.g
ACCDH880346DH880347
length9891,131
definitionDH880346|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O07, 5' end.DH880347|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(91,364,071 - 91,365,232)
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagaaaatgcaaatcgaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggatgtggagaaagagggacactcctccattgttggtgagattg
taagctgatacaaccactctggaaatcagtttggtggttcctcagaaaat
tggacatagtactaccggaagatccagcaataccactcctgggaatatac
ccagaagatgttccaatttgtaataaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgtcctt
caacagaggaatggatacagaaaatgtggtacatttacacaacggagtac
tactcagctattaaaaacaatgaatgaatctataaaattcctagataaat
ggatgtatctggaggatttcatcctgagtgaggtaacccaatcacaaaag
aacacacatgatatacactcactgttaagtggatattagtccagaaactt
agaatacccaagatacaatttagcaaaacacatgcaactcaagaagcaag
accaaagtgtggatacttcattccttcttagaagggggaacaaaataccc
atggaaggagttacagagacaaagtttggaacattatctgtttctaaatc
cagccctgcagcaggtgctagaaggaaaactccaactacagatgttaact
acacccaaaaaaacccacagggaataaataatcctagaccagcaaatcga
agcagagaagcacacactaccaccaccaccagcagcaacataacaacaaa
atgacagagtcacaaacactgctcattgtttctttcacatcaatgatctt
catccccattaaaaagacgcagactaatagatggatgtg
gaattccatggattaaagccgctatgtgaccaaatatacacacctgtgtt
gacagatatgcatcaagcaggcaccatgtggcatacactaaatgcatttc
acaaaagtctgcttggtaggagacttcagcgacccctacaacccaggtgg
cctggacagtctcagtcagctaagcacttctggacccacacagctcatgg
aggtaggccacagtagccacaagagactgatacctcaatcacttgtctag
taatctacaaccagcaagaggctacaatactgtccctgcctctccagacc
tccaaggccatccctgcagacagagacacatctacaaatcatgtgacctt
cctctccccatgttgccagaatcaaacctctgcttcctcctgtccttctt
caccccaatgctcacaaacactattaggccgccctcctactatagcgttt
agagttgactgtttcccacccaccccaaacccctgcctgcttccccacct
cccttaccaagccctcagaccaaccactcatcacccccgccactgcctac
cacctgagcagggccccacagccccaccagctctgccctgcacagtgatc
ctactcagttcccatcacacttggactcggatgggcctctcatgtcctcc
tgctcccttgctcatctgccagccagccccgccagcctgggtgtagctcc
gcccacttcaaggactggataagatctccccactgctcctacactgtagt
tctcttcccatcccaaacaaagtgaggataagcaagaccctcccaccacc
agccctcaaaataaatatttgtctttgcaaagccactggagaagttcaca
cagccctgatccacgtcctgtgtccttcctgggtggcccagagcagtaag
ggctgtacagagggggagggccgctctgggacgagagcaagacaagaaaa
caccccctgagaatccagtggcacacttggttctctttcttctttgtgtc
tagcttaactgtcaacaacagcactgaatggtgtatatgttgtataggac
ccaaacgcttggggcaagcccaagccgatgcctttcaataactaaaaatt
gcctaacttggggcaggtcaaagagggtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-058O07.b_45_509 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||| |||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCGTTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||| || |||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAAGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||| ||||   |
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACAAAT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||| ||||| ||||| || |||||||||||||| ||||
seq2  TGGAACATCTTCTGGGTATATTCCCAGGAGTGGTATTGCTGGATCTTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| ||||| ||| || ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCACCAAACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||  ||| | ||||| |||||||||||||||||||| ||||||||
seq2  GGTTGTATCAGCTTACAATCTCACCAACAATGGAGGAGTGTCCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||     ||||||||||||||||||||||||||||||||||||||
seq2  TCCACAT-----CCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  345

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||||||||||||||||||||||| |||||||||||  
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTCGATTTGCATTT-T  394

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCAGCCATTCA  444

seq1  GTATTCCTCAGGTGAGAATTC  461
      ||||||||||| |||||||||
seq2  GTATTCCTCAGTTGAGAATTC  465

seq1: chr1_91364071_91365232
seq2: B6Ng01-058O07.g_66_1196 (reverse)

seq1  CTCACCCTCTTTGCCCTGCCCCAGGGTTGAGTGCAATTTTCTTTGGTATT  50
      ||||||||||||| ||||||||| | | |   ||||||   ||| ||  |
seq2  CTCACCCTCTTTGACCTGCCCCAAGTTAG---GCAATT---TTTAGTTAT  44

seq1  TGAAAGGCAACTGGCTGTGGACCTTGGCCCCAGCTGTCTGTGGTCCTAAT  100
      ||||||||| | ||||  ||  |||| ||| ||| || || |||||||  
seq2  TGAAAGGCATC-GGCTTGGG--CTTGCCCCAAGC-GTTTG-GGTCCTA--  87

seq1  GACAACATATTAACACCATTCAGTTGCTGTTGTTTGTACAGTTAGAGCTA  150
       |||||||||  ||||||||||| ||||||||||   ||||||| |||| 
seq2  TACAACATAT--ACACCATTCAG-TGCTGTTGTT--GACAGTTA-AGCT-  130

seq1  AGACACAAAGGAAGAAAGAGAAGCCAAGTGTTGCCAACTGGATTCTCAGG  200
      ||||||||| |||||||||||| ||||||| |||| ||||||||||||||
seq2  AGACACAAA-GAAGAAAGAGAA-CCAAGTG-TGCC-ACTGGATTCTCAGG  176

seq1  GGGTTGTTTTCTTTGTTCTTGCTTCTCTGTCCCCGGAGCGGCCCCTCCCC  250
      ||| |||||||||   |||||| |||| || ||| |||||| ||||||||
seq2  GGG-TGTTTTCTT--GTCTTGC-TCTC-GT-CCCAGAGCGG-CCCTCCCC  219

seq1  CTCTGTACAGCCCTTACTGCTCTGGGCCAACCAGGAAGGACACAGGACGT  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTGTACAGCCCTTACTGCTCTGGGCCACCCAGGAAGGACACAGGACGT  269

seq1  GGATCAGGGCTGTGTGAACTTCTCCAGTGGCTTTGCAAAGACAAATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGGCTGTGTGAACTTCTCCAGTGGCTTTGCAAAGACAAATATTT  319

seq1  ATTTTGAGGGCTGGTGGTGGGAGGGTCTTGCTTATCCTCACTTTGTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGGGCTGGTGGTGGGAGGGTCTTGCTTATCCTCACTTTGTTTGG  369

seq1  GATGGGAAGAGAACTACAGTGTAGGAGCAGTGGGGAGATCTTATCCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAAGAGAACTACAGTGTAGGAGCAGTGGGGAGATCTTATCCAGTC  419

seq1  CTTGAAGTGGGCGGAGCTACACCCAGGCTGGCGGGGCTGGCTGGCAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTGGGCGGAGCTACACCCAGGCTGGCGGGGCTGGCTGGCAGATG  469

seq1  AGCAAGGGAGCAGGAGGACATGAGAGGCCCATCCGAGTCCAAGTGTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGAGCAGGAGGACATGAGAGGCCCATCCGAGTCCAAGTGTGATG  519

seq1  GGAACTGAGTAGGATCACTGTGCAGGGCAGAGCTGGTGGGGCTGTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAGTAGGATCACTGTGCAGGGCAGAGCTGGTGGGGCTGTGGGGC  569

seq1  CCTGCTCAGGTGGTAGGCAGTGGCGGGGGTGATGAGTGGTTGGTCTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCAGGTGGTAGGCAGTGGCGGGGGTGATGAGTGGTTGGTCTGAGG  619

seq1  GCTTGGTAAGGGAGGTGGGGAAGCAGGCAGGGGTTTGGGGTGGGTGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTAAGGGAGGTGGGGAAGCAGGCAGGGGTTTGGGGTGGGTGGGAA  669

seq1  ACAGTCAACTCTAAACGCTATAGTAGGAGGGCGGCCTAATAGTGTTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAACTCTAAACGCTATAGTAGGAGGGCGGCCTAATAGTGTTTGTG  719

seq1  AGCATTGGGGTGAAGAAGGACAGGAGGAAGCAGAGGTTTGATTCTGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGGGTGAAGAAGGACAGGAGGAAGCAGAGGTTTGATTCTGGCAA  769

seq1  CATGGGGAGAGGAAGGTCACATGATTTGTAGATGTGTCTCTGTCTGCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGAGAGGAAGGTCACATGATTTGTAGATGTGTCTCTGTCTGCAGG  819

seq1  GATGGCCTTGGAGGTCTGGAGAGGCAGGGACAGTATTGTAGCCTCTTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTTGGAGGTCTGGAGAGGCAGGGACAGTATTGTAGCCTCTTGCT  869

seq1  GGTTGTAGATTACTAGACAAGTGATTGAGGTATCAGTCTCTTGTGGCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAGATTACTAGACAAGTGATTGAGGTATCAGTCTCTTGTGGCTAC  919

seq1  TGTGGCCTACCTCCATGAGCTGTGTGGGTCCAGAAGTGCTTAGCTGACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTACCTCCATGAGCTGTGTGGGTCCAGAAGTGCTTAGCTGACTG  969

seq1  AGACTGTCCAGGCCACCTGGGTTGTAGGGGTCGCTGAAGTCTCCTACCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCCAGGCCACCTGGGTTGTAGGGGTCGCTGAAGTCTCCTACCAA  1019

seq1  GCAGACTTTTGTGAAATGCATTTAGTGTATGCCACATGGTGCCTGCTTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTTTTGTGAAATGCATTTAGTGTATGCCACATGGTGCCTGCTTGA  1069

seq1  TGCATATCTGTCAACACAGGTGTGTATATTTGGTCACATAGCGGCTTTAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATCTGTCAACACAGGTGTGTATATTTGGTCACATAGCGGCTTTAA  1119

seq1  TCCATGGAATTC  1162
      ||||||||||||
seq2  TCCATGGAATTC  1131