BAC Information

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BAC

Clone NameB6Ng01-059M13
Chromosome10 (Build37)3 (Build37)
Map Location 104,054,131 - 104,054,333150,038,671 - 150,038,788
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059M13.bB6Ng01-059M13.g
ACCDH880957DH880958
length1,031806
definitionDH880957|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M13, 5' end.DH880958|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,131 - 104,054,333)(150,038,671 - 150,038,788)
sequence
gaattctcaaatgagaaataccaaatgactgagaagcacctaaaaaaaaa
atgttcaacatccttaatcattagggaaatgcaaataaaaaccaccatga
gatttcacctcacaccagtcagaatggctaagatcaaaaactcaggtgac
agcagatgctggtgaggatgtggagagagatccactgctggtgggattgc
aagctagtacaaccactctagaaatcagtttggcagttcctcagaaaact
ttatttcttctttctttcttccttccttccttccttccttccttccttcc
ttcctcctttctttctttctttctttctttctttctttctttctttcttt
ctttctttctttctttctttctttcttttctttccttccttccttcctcc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctttctttctttctctctttcctttccttctgctctttttttccc
tttatttacttattttttattagatattttctttattgacatttcaaatg
ctatcacaaaagttccctataccctccccaccccctaccctgatctccta
cctacccactgccacttcttgaccctagagttcccctatactggggcata
taaagtttgcaataccaaggggcctctatttccaatgatggccgaactag
gccatcttctgctacatatgcagctagaaacacaagctctgggagtactg
gttagttcatgttgttgtccacctacagggttgcagattccttcagctaa
ttgggtgctttctctagcttctccattgggggccctgtgttccatcctat
atatgactgtgacatccacttctgtatttgccaggcactgacatagcttc
atacaagacagctatatcagttgcttcagcaaaatcttgctagcatatgc
atagtgtctggtttggtggctgataatgggatgtgtccctgggtaggata
gtctctgatagtcatcctttggtctacctcc
gaattctcattacagtcatgtattgcagaatacattacataatagaagaa
agttggctgattttatctcagttgtaaccactgcctggtttctgtcagtt
tttatgtatgcatttctctgttttgtgtaaagagtcattatgcatcagat
gacctcaatgtatcttggctgatggatcacctaacttccctgttttcttc
tgtaatgactatatgtctgatgcttgctttgagaaattgcactcagattc
agcactcttttgtttgtgtttgtcactttctgactccttgcccacctgag
tatcataaccctgattctccccaagttgagggaccctgactgggtctgcc
cacagcattagtgtattcagggtttactattgtggaagaacagggttctg
atgatgccaacatatattggcttatgtcgcttaaggtcttgtgcttgcct
cttgccatctagatattcctggtggttgttggtctgggtgactctgtctt
gagtctgcctcttttgtctctgggttgcttcagatctcctggtagtcctg
aggctgcagctgtagggctgaagcagaccacctgtgggacgttccaactg
ggggcttttctgagtggcagagaagctccggatctgttgccatagctgca
gtagatctcctgggaggccttcagaatgttgggtcttttgatacatatgc
agtggcctagtcagccattactggaaagagaggcccattggacacacaaa
ctgtatatgccccagtacaggggaatgccagggccaaaaaaatgggaatg
agtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054131_104054333
seq2: B6Ng01-059M13.b_79_274 (reverse)

seq1  GATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAG  50
      |||||| ||||||||||||| ||| ||||||||||||| || ||||    
seq2  GATTTCTAGAGTGGTTGTACTAGCTTGCAATCCCACCAGCAGTGGA----  46

seq1  TGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTT  100
            ||| ||||||||||||| ||||||||||||||||||||| ||||
seq2  ------TCTCTCTCCACATCCTCACCAGCATCTGCTGTCACCTGAGTTTT  90

seq1  TGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTG  150
      ||||||||||||||||||||||||||||||| ||||||| ||| ||||| 
seq2  TGATCTTAGCCATTCTGACTGGTGTGAGGTGAAATCTCATGGTGGTTTTT  140

seq1  ATTTGCATTTCCCTGATGATTAAGGATGTTGAACA---TTTTTTCAGGTG  197
      |||||||||||||| ||||||||||||||||||||   |||||| |||||
seq2  ATTTGCATTTCCCTAATGATTAAGGATGTTGAACATTTTTTTTTTAGGTG  190

seq1  CTTCTC  203
      ||||||
seq2  CTTCTC  196

seq1: chr3_150038671_150038788
seq2: B6Ng01-059M13.g_769_872 (reverse)

seq1  CCCACTCATTCCCATTTTTTTTTTTTTTTTTTTTTGGCCCTGGCGTTCCC  50
      ||||||||||||||              |||||||||||||||| |||||
seq2  CCCACTCATTCCCA--------------TTTTTTTGGCCCTGGCATTCCC  36

seq1  CTGTACTGGGGCATATACAGTTTGCATGTCCAATGGGCCTCTCTTTCTAG  100
      ||||||||||||||||||||||||  ||||||||||||||||||||| ||
seq2  CTGTACTGGGGCATATACAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAG  86

seq1  TGATGGCCGACTAGGCCA  118
      | ||||| ||||||||||
seq2  TAATGGCTGACTAGGCCA  104