BAC Information

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BAC

Clone NameB6Ng01-060I15
Chromosome10 (Build37)
Map Location 40,251,248 - 40,252,332
singlet/doubletsinglet
Overlap genenone
Upstream geneFyn, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374
Downstream geneSlc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060I15.bB6Ng01-060I15.g
ACCDH881487DH881488
length1,1431,070
definitionDH881487|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I15, 5' end.DH881488|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccagatggctgagaagcacgtaaagaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgatat
tctaccttacaccagtcaaaatggctaagatcaataactcaggttacagc
agatgctggcgagcatgtggagaaagagaaacattcctccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtttggcggttcctca
gaaatttggacatagtactacctgaggagctagctgtatcacccctgggc
atatacccagaagatggtccagcttgtagtaaggacacatgctccaccat
gttcatagcagccttatttataataaccaggagctgaaaaacccagatgt
cctttaacagaggaatggatacagaaaatgtggtgcacttacacaatgga
gtactactcagctattaaaaagatgaattcatgaaattgttaggcaaatg
gattgaactagaaaatatcatcctgactgagataacccaattgcaaaaga
acacacaaggtatgcactcactgataagtggatattagtctaaaaactcc
aaataaccaaggtacaattcaagaccacatgaagctcaagaagaaggagg
atgaaagtgtgggtactttggtccttcttaggaaaacaaaaatactcaca
tgagcaaatttttagataaagtgtagcacagagactgtcccacctgggca
ttcatcccatatacaattaccaaacccagacgctattgtagatgccaaaa
agtgcatgctgaaaggagcctgatatgacagtctcctgagaggccctgcc
agagtcttacaatacagaggcagatgctcacagccaactattggactgat
acgggtccccaacagaggagttagagaaaggactgaaggagctgagtggt
tgcaccctacaggaagacaacatatcaactaacagatgcccccagagctc
ccagggactagccatcacaaagagtaacatagctccggtgcatatgtaga
agaagaatggcctgtcatgcatcatggagggaggtccttggtcctatgaa
gctcagagatgtcccatgtaagggatcaagtggaaagatagaa
gaattcaaccacgaggcttggaagctaggggtttttatagaaaaggggct
ggggctgggggaggaattggcgaaggttcacatgattggttcatttaaac
atcagcagggaggaattggtgtggtttcacatgattggtccatttgaaca
tcagcagactgtacatgcagataacatttaacttaggtcagaagggcagg
agatagggagtctggcatgtcattctctttatctttatggccaagcagcc
tcaggaatgtcttaccgatgggcctgcccgggcatgtcctggtctgttct
gctatgttctcagccccaggtttcaaagctcacaaacaactctttgggct
atttgacataaattacatgaatcacaggtctcaagttttattttctttca
tagctatctgtgcccatcaaacctagttcatcttcccacatcgcctcttg
tgcttctgtgcctactggaggagatcaccatgtgaaaacacaaatatttt
gaattttgaacacttaaataaattcatgaccctaggacttcctcgtatta
aaactttcagggcgagacaaatggctcagtgagcaaaagcaaaagcctca
aaagtcataggacctgagtctgacccttagagcccactgtggaaggaacg
tgccaattcctgaagggtgttctctgacctgcgctcacgagtgcacacac
acacacacacacacacacacacacacacaccacaaaaataaaaatcaatc
taagttgggtggtagtggtacacatctttaatcccagcactcaggaggca
gaagcaggtggatctctgtgaggtcaagggtagactggtctatcgagaga
gttcaggatagccacacagggatactccgagaaaccctgttttgaaaaat
gaaatgaaacccaacaactaaacaaacaaaaagaaaacagaacaaactct
aaacaaaccaagacaaaacaacaaaatcaatcttaaaaattctcagctat
tatgatttaaaatacattttgatgattagtgccacacccactcaagtgaa
actgtttgacaggctccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40251248_40252332
seq2: B6Ng01-060I15.g_67_1136

seq1  GAATTCAACCACGAGGCTTGGAAGCTAGGGGTTTTTATAGAAAAGGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCACGAGGCTTGGAAGCTAGGGGTTTTTATAGAAAAGGGGCT  50

seq1  GGGGCTGGGGGAGGAATTGGCGAAGGTTCACATGATTGGTTCATTTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGGGGAGGAATTGGCGAAGGTTCACATGATTGGTTCATTTAAAC  100

seq1  ATCAGCAGGGAGGAATTGGTGTGGTTTCACATGATTGGTCCATTTGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGGGAGGAATTGGTGTGGTTTCACATGATTGGTCCATTTGAACA  150

seq1  TCAGCAGACTGTACATGCAGATAACATTTAACTTAGGTCAGAAGGGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGACTGTACATGCAGATAACATTTAACTTAGGTCAGAAGGGCAGG  200

seq1  AGATAGGGAGTCTGGCATGTCATTCTCTTTATCTTTATGGCCAAGCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGGAGTCTGGCATGTCATTCTCTTTATCTTTATGGCCAAGCAGCC  250

seq1  TCAGGAATGTCTTACCGATGGGCCTGCCCGGGCATGTCCTGGTCTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATGTCTTACCGATGGGCCTGCCCGGGCATGTCCTGGTCTGTTCT  300

seq1  GCTATGTTCTCAGCCCCAGGTTTCAAAGCTCACAAACAACTCTTTGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTTCTCAGCCCCAGGTTTCAAAGCTCACAAACAACTCTTTGGGCT  350

seq1  ATTTGACATAAATTACATGAATCACAGGTCTCAAGTTTTATTTTCTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACATAAATTACATGAATCACAGGTCTCAAGTTTTATTTTCTTTCA  400

seq1  TAGCTATCTGTGCCCATCAAACCTAGTTCATCTTCCCACATCGCCTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCTGTGCCCATCAAACCTAGTTCATCTTCCCACATCGCCTCTTG  450

seq1  TGCTTCTGTGCCTACTGGAGGAGATCACCATGTGAAAACACAAATATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTGCCTACTGGAGGAGATCACCATGTGAAAACACAAATATTTT  500

seq1  GAATTTTGAACACTTAAATAAATTCATGACCCTAGGACTTCCTCGTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGAACACTTAAATAAATTCATGACCCTAGGACTTCCTCGTATTA  550

seq1  AAACTTTCAGGGCGAGACAAATGGCTCAGTGAGCAAAAGCAAAAGCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCAGGGCGAGACAAATGGCTCAGTGAGCAAAAGCAAAAGCCTCA  600

seq1  AAAGTCATAGGACCTGAGTCTGACCCTTAGAGCCCACTGTGGAAGGAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATAGGACCTGAGTCTGACCCTTAGAGCCCACTGTGGAAGGAACG  650

seq1  TGCCAATTCCTGAAGGGTGTTCTCTGACCTGCGCTCACGAGTGCACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTCCTGAAGGGTGTTCTCTGACCTGCGCTCACGAGTGCACACAC  700

seq1  ACACACACACACACACACACACACACACACCACAAAAATAAAAATCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACCACAAAAATAAAAATCAATC  750

seq1  TAAGTTGGGTGGTAGTGGTACACATCTTTAATCCCAGCACTCAGGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGGGTGGTAGTGGTACACATCTTTAATCCCAGCACTCAGGAGGCA  800

seq1  GAAGCAGGTGGATCTCTGTGAGGTCAAGGGTAGACTGGTCTACCGAGAGA  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAGCAGGTGGATCTCTGTGAGGTCAAGGGTAGACTGGTCTATCGAGAGA  850

seq1  GTTCCAGGATAGCCACACAGGGATACTCCGAGAAACCCTGTCTTGAAAAA  900
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTT-CAGGATAGCCACACAGGGATACTCCGAGAAACCCTGTTTTGAAAAA  899

seq1  TGAAATGAAACCAAACCAACTAAACAAACAAAAAAGAAAAACAGAACAAA  950
      |||||||||||| || ||||||||||||||||||   |||||||||| ||
seq2  TGAAATGAAACCCAA-CAACTAAACAAACAAAAA--GAAAACAGAAC-AA  945

seq1  ACCCCAAACAAAACCAAGAACAAAACAAACAAAAATCAATCTTAAAAAAT  1000
      || | |||| |||||||| |||||||||   |||||||||||| ||||||
seq2  ACTCTAAAC-AAACCAAG-ACAAAACAA--CAAAATCAATCTT-AAAAAT  990

seq1  TCTCAGCTTATTATGAATTTAATATACATTTTTGTATGTATTAGTGCCAC  1050
      ||||||| ||||||| |||||| |||||||||   ||| |||||||||||
seq2  TCTCAGC-TATTATG-ATTTAAAATACATTTT--GATG-ATTAGTGCCAC  1035

seq1  ACCCACTCAAGTGGAAACTGTGTGACAGGC-CCAAA  1085
      |||||||||||| |||||||| |||||||| |||||
seq2  ACCCACTCAAGT-GAAACTGTTTGACAGGCTCCAAA  1070