BAC Information

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BAC

Clone NameB6Ng01-060P21
Chromosome12 (Build37)10 (Build37)
Map Location 10,330,411 - 10,330,5886,975,784 - 6,975,923
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC633030, LOC100042238, Osr1, LOC382567
Downstream geneNt5c1b, Rdh14, LOC238074, LOC100042308, EG668435, Kcns3, LOC628276, Msgn1, 5830483C08Rik, Smc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060P21.bB6Ng01-060P21.g
ACCDH881803DH881804
length991140
definitionDH881803|Mus musculus domesticus DNA, BAC clone: B6Ng01-060P21, 5' end.DH881804|Mus musculus domesticus DNA, BAC clone: B6Ng01-060P21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(10,330,411 - 10,330,588)(6,975,784 - 6,975,923)
sequence
gaattccaagtttgttggcttcaaggatttcctaggatgttggaacactg
gtgaaggcttagctatgtcagaattcaatcttaaaaggcacttataataa
aaataatactaaaagagagcatgtggatccatacaccagactaacgtggg
gatagggtttgagtataagggttatgagaatgccaaggttcctggaggtg
agtttctctgaaactctttgcctcgtgagtgctctcaagcctctcggcct
gccaagcaaacttcactgtagtgtgcggagcagattgccaagttggaaat
attattatgtgcccttttgaataactactacacaatgcttgcttaaatga
tcaccattatctgctactgtgtccccaggagacagactaggcagaccaac
ccaaacagcccacagagctagcagcctgagctaggcagactctctcatcc
cacagtcacctgctagagctctccccctactctccctttggcccccggcc
agagtgagacctagggtctgtcctcacctcttgctaggatctaggatgtt
tgagagcaagaaccttttgtccctgacccaaggcagcccagggactccaa
aaccggttcttccgctgtacccagcacctgctttgtttgactctttgtac
tcttttgtttctatttggttgattccagtcctgaatttgattacatgttg
ccatctacttctcttgggtgtatttgcttcttttatgttctagagctgtg
ctgtcaaactgttagtgtatgcactctccagtttctttttggaggcaatc
agagctatgagttttcctcttagcactgctttcattgtgtcccataagtt
tggttatgctgtggcttcattttcactgaattctaaaagaatttattttt
ctttatttcttccttgaccaagctgtcattgagtagagtattgttcagct
tccatgtatatatgggctttctattgtttgttgttactaaa
cttacatatggatccagatttaacctaacagttctgttacaatcaaattc
ctagctcaaaatttcactatgcaagctttcccacaagattaaatagagag
ggagggggaaagagagagaggaggaaagaagggagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_10330411_10330588
seq2: B6Ng01-060P21.b_821_994 (reverse)

seq1  TGAACAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAGGAAA  50
      ||||||| ||||| |||||||| | |||||||||||||| ||||| ||  
seq2  TGAACAATACTCTACTCAATGACAGCTTGGTCAAGGAAGAAATAAAGA--  48

seq1  GAAATTAAAGACTTTTCAGGGTTTAATGAAAATGAAGCCACAACATACCC  100
       ||| ||||  ||||| ||  || | |||||||||||||||| |||| ||
seq2  -AAAATAAATTCTTTT-AGAATTCAGTGAAAATGAAGCCACAGCATAACC  96

seq1  AAACTTATGGGACACAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTC  150
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  AAACTTATGGGACACAATGAAAGCAGTGCTAAGAGGAAAACTCATAGCTC  146

seq1  TGAGTGCCTCCAAAAAGAAACTAGAGAG  178
      ||| |||||||||||||||||| |||||
seq2  TGATTGCCTCCAAAAAGAAACTGGAGAG  174

seq1: chr10_6975784_6975923
seq2: B6Ng01-060P21.g_73_212

seq1  CTTACATATGGATCCAGATTTAACCTAACAGTTCTGTTACAATCAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATATGGATCCAGATTTAACCTAACAGTTCTGTTACAATCAAATTC  50

seq1  CTAGCTCAAAATTTCACTATGCAAGCTTTCCCACAAGATTAAATAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCAAAATTTCACTATGCAAGCTTTCCCACAAGATTAAATAGAGAG  100

seq1  GGAGGGGGAAAGAGAGAGAGGAGGAAAGAAGGGAGGGAGA  140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGAAAGAGAGAGAGGAGGAAAGAAGGGAGGGAGA  140