BAC Information

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BAC

Clone NameB6Ng01-060P23
Chromosome10 (Build37)
Map Location 128,124,201 - 128,265,034
singlet/doubletdoublet
Overlap geneRab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik
Upstream geneBC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589
Downstream geneGdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060P23.bB6Ng01-060P23.g
ACCDH881807DH881808
length979894
definitionDH881807|Mus musculus domesticus DNA, BAC clone: B6Ng01-060P23, 5' end.DH881808|Mus musculus domesticus DNA, BAC clone: B6Ng01-060P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,124,201 - 128,125,164)(128,264,143 - 128,265,034)
sequence
gaattcactttgtagaccaggctagccttgaactcagaaatccgccttac
tctgcctcctgagtgctggaattaaaggcgtgcaccaccactgcccggct
aaacttcattttttaaaaaaacattttttgttttgttttatgagatggtc
taaaaattttggtatatagtccaggttggctttaaacctgtgacaatttt
cctgcctcagcttcccaagtgctaggatcagaggcaaggaccaccaaact
caataaggtttctttaacagggtctagatagctcagagtgacttgaactc
ctgattcttctgccttcacccactcccactgaagtgctagaccggcaagc
ccacatggattttatgccaagtttattctggttttctgagacaacgtctc
attgaatagtagtggctggcctggaacttaccatgtagaccaggctagcc
ttgaaattacagtgatctccctgcctcgtcctctgagtgctatggttaca
ggtgtgcacaatcactttttagaacaagaacagaatctcatttccttgtt
tctaaaacttggctctggtaattaactataccacattgaaaggttactca
cacttctgataaggtcctacacagctgaccttcagtgagagtggtaaaga
gcaaaacaagaactgcttctgggcaagtgtggtgctatgtacctgcaatc
ccagcattcaggaggctaggcaggaggatccatcactagcttaaggccca
ccctgtctagtcctcccaatcatctatacacacaaagaactgcatctgca
ataaagattgctcttccagagtatgactagcaagggagctgaaatggaga
ctgaaaaggagtcttaaatccctgacacatcttcaaagttttcccctgaa
tcacggcaaactttagctggcctgtccaaccacaggtacactagtatgca
actggtgtgtgtgtgtgtgtgtgtgtgtg
gaattcctatatgcaaatcagaacacaaatatgtctggtctgaaacatga
tctttctggttttaaagtaaagatcttaaaaccaaagtgtcaaagctaga
aagcagttatttacagaagggagaactttacaactaggaggcatgctctg
tgtttctgcagttcttcagacagagtagcatttggaaatagggatagcag
tttgttagattttgtttgtttgttttgttttccttgccagtatacaatga
ttggatgattggaggagtatttagtaggtaggataggcagacaagcaggg
aagctttttaaccaaatgagtcagtatttctttactgagaaacactgaaa
agaaataagtaaggctcctacctacacagaatgattgcagtgacttcaga
atgtagcacttaagaatatggcctctagctgggcagtggtgtcacacgcc
ttttatcccagcacttgggaggcagaggcagacggatttctgagttcggg
gccagactgatctacagagtgagttccaggacagccagggctacacagag
aaaccctatctcgaaaaaacaaaaaataaaaaaaatttaaaaagtgaggg
ctcaagtgatgattcagtggttaggagcattagtggctcttccagagacc
aaagcttgattcccagcactcacacagaagctcacaatagtttataaccc
tggttccaggggatctaacaccttcttctaggtcagccggtaaaaaagta
ccatgctggcttgacaacctgagttatatccactgatcccactgtgaaag
aacagaaccaccagtttccaaaagctgtccatacgtatggcatgggcaca
taaactcacatatacacacagtaaattacatttgaaatttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128124201_128125164
seq2: B6Ng01-060P23.b_64_1027

seq1  ACCAGGCTAGCCTTGAACTCAGAAATCCGCCTTACTCTGCCTCCTGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTAGCCTTGAACTCAGAAATCCGCCTTACTCTGCCTCCTGAGTG  50

seq1  CTGGAATTAAAGGCGTGCACCACCACTGCCCGGCTAAACTTCATTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTAAAGGCGTGCACCACCACTGCCCGGCTAAACTTCATTTTTTA  100

seq1  AAAAAACATTTTTTGTTTTGTTTTATGAGATGGTCTAAAAATTTTGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACATTTTTTGTTTTGTTTTATGAGATGGTCTAAAAATTTTGGTAT  150

seq1  ATAGTCCAGGTTGGCTTTAAACCTGTGACAATTTTCCTGCCTCAGCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAGGTTGGCTTTAAACCTGTGACAATTTTCCTGCCTCAGCTTCC  200

seq1  CAAGTGCTAGGATCAGAGGCAAGGACCACCAAACTCAATAAGGTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTAGGATCAGAGGCAAGGACCACCAAACTCAATAAGGTTTCTTT  250

seq1  AACAGGGTCTAGATAGCTCAGAGTGACTTGAACTCCTGATTCTTCTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGTCTAGATAGCTCAGAGTGACTTGAACTCCTGATTCTTCTGCCT  300

seq1  TCACCCACTCCCACTGAAGTGCTAGACCGGCAAGCCCACATGGATTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCACTCCCACTGAAGTGCTAGACCGGCAAGCCCACATGGATTTTAT  350

seq1  GCCAAGTTTATTCTGGTTTTCTGAGACAACGTCTCATTGAATAGTAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTTTATTCTGGTTTTCTGAGACAACGTCTCATTGAATAGTAGTGG  400

seq1  CTGGCCTGGAACTTACCATGTAGACCAGGCTAGCCTTGAAATTACAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGGAACTTACCATGTAGACCAGGCTAGCCTTGAAATTACAGTGA  450

seq1  TCTCCCTGCCTCGTCCTCTGAGTGCTATGGTTACAGGTGTGCACAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGCCTCGTCCTCTGAGTGCTATGGTTACAGGTGTGCACAATCAC  500

seq1  TTTTTAGAACAAGAACAGAATCTCATTTCCTTGTTTCTAAAACTTGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAACAAGAACAGAATCTCATTTCCTTGTTTCTAAAACTTGGCTC  550

seq1  TGGTAATTAACTATACCACATTGAAAGGTTACTCACACTTCTGATAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTAACTATACCACATTGAAAGGTTACTCACACTTCTGATAAGGT  600

seq1  CCTACACAGCTGACCTTCAGTGAGAGTGGTAAAGAGCAAAACAAGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACAGCTGACCTTCAGTGAGAGTGGTAAAGAGCAAAACAAGAACTG  650

seq1  CTTCTGGGCAAGTGTGGTGCTATGTACCTGCAATCCCAGCATTCAGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCAAGTGTGGTGCTATGTACCTGCAATCCCAGCATTCAGGAGG  700

seq1  CTAGGCAGGAGGATCCATCACTAGCTTAAGGCCCACCCTGTCTAGTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGGAGGATCCATCACTAGCTTAAGGCCCACCCTGTCTAGTCCTC  750

seq1  CCAATCATCTATACACACAAAGAACTGCATCTGCAATAAAGATTGCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCATCTATACACACAAAGAACTGCATCTGCAATAAAGATTGCTCTT  800

seq1  CCAGAGTATGACTAGCAAGGGAGCTGAAATGGAGACTGAAAAGGAGTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTATGACTAGCAAGGGAGCTGAAATGGAGACTGAAAAGGAGTCTT  850

seq1  AAATCCCTGACACATCTTCAAAGTTTTCCCCTGAATCACGGCAAACTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTGACACATCTTCAAAGTTTTCCCCTGAATCACGGCAAACTTTA  900

seq1  GCTGGCCTGTCCAACCACAGGTACACTAGTATGCAACTGGTGTGTGTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTGTCCAACCACAGGTACACTAGTATGCAACTGGTGTGTGTGTG  950

seq1  TGTGTGTGTGTGTG  964
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  964

seq1: chr10_128264143_128265034
seq2: B6Ng01-060P23.g_67_960 (reverse)

seq1  TTAAAATTTTC-AATGTAAATTTACTGTGTGTATATGTGAGTTTATGTG-  48
      |||||| |||| ||||| ||||||||||||||||||||||||||||||| 
seq2  TTAAAAATTTCAAATGT-AATTTACTGTGTGTATATGTGAGTTTATGTGC  49

seq1  CCATGGCATACGTATGGACAGCTTTTGGGAACTGGTGGTTCTGTTCTTTC  98
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  CCATGCCATACGTATGGACAGCTTTTGGAAACTGGTGGTTCTGTTCTTTC  99

seq1  ACAGTGGGATCAGTGGATATAACTCAGGTTGTCAGGCCAGCATGGTAC-T  147
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  ACAGTGGGATCAGTGGATATAACTCAGGTTGTCAAGCCAGCATGGTACTT  149

seq1  TTTTACCGGCTGACCTAGAAGAAGGTGTTAGATCCCCTGGAACCAGGGTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCGGCTGACCTAGAAGAAGGTGTTAGATCCCCTGGAACCAGGGTT  199

seq1  ATAAACTATTGTGAGCTTCTGTGTGAGTGCTGGGAATCAAGCTTTGGTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTATTGTGAGCTTCTGTGTGAGTGCTGGGAATCAAGCTTTGGTCT  249

seq1  CTGGAAGAGCCACTAATGCTCCTAACCACTGAATCATCACTTGAGCCCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGCCACTAATGCTCCTAACCACTGAATCATCACTTGAGCCCTC  299

seq1  ACTTTTTAAATTTTTTTTATTTTTTGTTTTTTCGAGATAGGGTTTCTCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAAATTTTTTTTATTTTTTGTTTTTTCGAGATAGGGTTTCTCTG  349

seq1  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGATCAGTCTGGCCCCGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGATCAGTCTGGCCCCGA  399

seq1  ACTCAGAAATCCGTCTGCCTCTGCCTCCCAAGTGCTGGGATAAAAGGCGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATCCGTCTGCCTCTGCCTCCCAAGTGCTGGGATAAAAGGCGT  449

seq1  GTGACACCACTGCCCAGCTAGAGGCCATATTCTTAAGTGCTACATTCTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACCACTGCCCAGCTAGAGGCCATATTCTTAAGTGCTACATTCTGA  499

seq1  AGTCACTGCAATCATTCTGTGTAGGTAGGAGCCTTACTTATTTCTTTTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGCAATCATTCTGTGTAGGTAGGAGCCTTACTTATTTCTTTTCA  549

seq1  GTGTTTCTCAGTAAAGAAATACTGACTCATTTGGTTAAAAAGCTTCCCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTCAGTAAAGAAATACTGACTCATTTGGTTAAAAAGCTTCCCTG  599

seq1  CTTGTCTGCCTATCCTACCTACTAAATACTCCTCCAATCATCCAATCATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGCCTATCCTACCTACTAAATACTCCTCCAATCATCCAATCATT  649

seq1  GTATACTGGCAAGGAAAACAAAACAAACAAACAAAATCTAACAAACTGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTGGCAAGGAAAACAAAACAAACAAACAAAATCTAACAAACTGCT  699

seq1  ATCCCTATTTCCAAATGCTACTCTGTCTGAAGAACTGCAGAAACACAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTATTTCCAAATGCTACTCTGTCTGAAGAACTGCAGAAACACAGAG  749

seq1  CATGCCTCCTAGTTGTAAAGTTCTCCCTTCTGTAAATAACTGCTTTCTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTCCTAGTTGTAAAGTTCTCCCTTCTGTAAATAACTGCTTTCTAG  799

seq1  CTTTGACACTTTGGTTTTAAGATCTTTACTTTAAAACCAGAAAGATCATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACACTTTGGTTTTAAGATCTTTACTTTAAAACCAGAAAGATCATG  849

seq1  TTTCAGACCAGACATATTTGTGTTCTGATTTGCATATAGGAATTC  892
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACCAGACATATTTGTGTTCTGATTTGCATATAGGAATTC  894