BAC Information

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BAC

Clone NameB6Ng01-061P22
Chromosome10 (Build37)
Map Location 45,970,722 - 46,110,366
singlet/doubletdoublet
Overlap genenone
Upstream genePopdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1, LOC664781
Downstream geneLOC100041632, LOC668252
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061P22.bB6Ng01-061P22.g
ACCDH882520DH882521
length7411,122
definitionDH882520|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P22, 5' end.DH882521|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,970,722 - 45,971,404)(46,109,237 - 46,110,366)
sequence
gaattctaacaaagcaacaaaatttcaaagcaaattctaaatactagtga
aaatagattaacctacccataaaaattacagaaaatacagatgaattata
aatgaaacggttttgtgaagtagatttcaaataaaatgaaataaaataaa
aaacaaaataaaatgagcatatagacagggcaagcccccatggggaaact
gcagtggggtggctggcctcagacttctccttttcaaggttccagtttta
aacacagtacagccattgctacagactgctgaaaaaggaatggttttaag
aagccaaatgctggttccagtataaaagctggcagcacactttgaaattg
aaagtggctgggaaatattatttcaattagatgtaaagtccaggggacac
aaggacatattcctctctgcggcctcagtcaccctatggatggggaccta
tgttgttccccacacagatattttgatggctttctgctaattgtgctact
gtctccctcaaatcctgttgtctaccaatacagatccactgtacctgttt
gctgtcccattaaaaatctttctgaattgcttcttttcttttctttctct
ctttctctctctctttctttctttctttctttctttctttctttctttct
ttctttcttccttccttccttccttccttccttacatacacatcttacgt
tgtccgtgactcgctggtacagcgtaagcaggactggagcc
gaattcttctcattaggtattttaatcaccctcagtttgattaattgaag
atccaagtttaattccaaagtaagaaaaagcattgtttttaaaacatact
agaaaaaattgttataactgaaaaattatcttgggactcactatgagttc
tgcgatacacgcaagcttcctttgaaataatatagaaagaaattcagaga
taattattagtattcagagataatttttccattaattatctatttataca
tttgcagcaacatattgaaactatgtcacactatgaatctgtggaagttt
taaagaaaaaaatactcatgattaatttatattcctcttcttaaaggaac
aaatacaattcgtctcagaacaccacactgtgtttttaatggggtgtatt
gattacactcttcactcctttcagagacatatgaatgcagtagcgaactc
tagggaaagacagtggagaaaatggaaattcagtaaggcagtgttatttt
ctcctaaaagtacctgactgtaggagatgagtaacacgtccaactaaccc
tgggatttcagcaggaaggtgaaatactagagctgaatctatgtgttcca
gtgtgttccataaacacgaagacatacaaaaattgcaaataggtaggtga
tgaattataaatagttagaagatacacagtcattatatacacatgagacc
catatttagctattctctggtaaaatgaagaagaaaactaaaggtacttt
taaagacactcacaaaaaaatacatattacctatggtggagtgtaaatca
gatttatagctgacatctcaacaaaaacagtgggggcaagaaactaatga
aatgggaacttcagtaaaataaatacacctttaattctacaccaagaaga
atgtctttcaaaacaaagatcataattagagacattgagacaaagtagtc
ctgacagaatacattatcagtagctacactgaaagaaatgtcagaggcta
tttatcagaagaataaaaactaatgttagttgaattagaagatataaaag
ggatgatgaacagagaatggtgaaataaatttgtattaatctaataacat
tatagatgacatactaaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45970722_45971404
seq2: B6Ng01-061P22.b_46_728

seq1  GAATTCTAACAAAGCAACAAAATTTCAAAGCAAATTCTAAATACTAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACAAAGCAACAAAATTTCAAAGCAAATTCTAAATACTAGTGA  50

seq1  AAATAGATTAACCTACCCATAAAAATTACAGAAAATACAGATGAATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATTAACCTACCCATAAAAATTACAGAAAATACAGATGAATTATA  100

seq1  AATGAAACGGTTTTGTGAAGTAGATTTCAAATAAAATGAAATAAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACGGTTTTGTGAAGTAGATTTCAAATAAAATGAAATAAAATAAA  150

seq1  AAACAAAATAAAATGAGCATATAGACAGGGCAAGCCCCCATGGGGAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATAAAATGAGCATATAGACAGGGCAAGCCCCCATGGGGAAACT  200

seq1  GCAGTGGGGTGGCTGGCCTCAGACTTCTCCTTTTCAAGGTTCCAGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGGGTGGCTGGCCTCAGACTTCTCCTTTTCAAGGTTCCAGTTTTA  250

seq1  AACACAGTACAGCCATTGCTACAGACTGCTGAAAAAGGAATGGTTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTACAGCCATTGCTACAGACTGCTGAAAAAGGAATGGTTTTAAG  300

seq1  AAGCCAAATGCTGGTTCCAGTATAAAAGCTGGCAGCACACTTTGAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAATGCTGGTTCCAGTATAAAAGCTGGCAGCACACTTTGAAATTG  350

seq1  AAAGTGGCTGGGAAATATTATTTCAATTAGATGTAAAGTCCAGGGGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGCTGGGAAATATTATTTCAATTAGATGTAAAGTCCAGGGGACAC  400

seq1  AAGGACATATTCCTCTCTGCGGCCTCAGTCACCCTATGGATGGGGACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATATTCCTCTCTGCGGCCTCAGTCACCCTATGGATGGGGACCTA  450

seq1  TGTTGTTCCCCACACAGATATTTTGATGGCTTTCTGCTAATTGTGCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCCCCACACAGATATTTTGATGGCTTTCTGCTAATTGTGCTACT  500

seq1  GTCTCCCTCAAATCCTGTTGTCTACCAATACAGATCCACTGTACCTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTCAAATCCTGTTGTCTACCAATACAGATCCACTGTACCTGTTT  550

seq1  GCTGTCCCATTAAAAATCTTTCTGAATTGCTTCTTTTCTTTTCTTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCCATTAAAAATCTTTCTGAATTGCTTCTTTTCTTTTCTTTCTCT  600

seq1  CTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  650

seq1  TTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  683
      |||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  683

seq1: chr10_46109237_46110366
seq2: B6Ng01-061P22.g_69_1190 (reverse)

seq1  TAATATTAGTATGTCATCCTATAAATGTTATTAGTATTAAATAACATATT  50
      |||| |||||||||||| |||| ||||||||||| |||||   ||| |||
seq2  TAATTTTAGTATGTCAT-CTAT-AATGTTATTAG-ATTAA--TACAAATT  45

seq1  TTATTCACCCAATTCT-TGTTCATCATTCTATTTATATC-TCTAATTTCA  98
      |  ||||||  ||||| |||||||||| |  |||||||| ||||| ||||
seq2  TATTTCACC--ATTCTCTGTTCATCATCCCTTTTATATCTTCTAA-TTCA  92

seq1  ACTAACATTAGTTTTTATTCTTCCTGATAAATAGCCTCTGGCATTTCTTT  148
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  ACTAACATTAGTTTTTATTCTT-CTGATAAATAGCCTCTGACATTTCTTT  141

seq1  CAGTGTAGCCTACTGATAATGTATTCTGTCAGGACTACTTTGTCTCAATG  198
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAG-CTACTGATAATGTATTCTGTCAGGACTACTTTGTCTCAATG  190

seq1  TCTCTAATTATGATCTTTGTTTTGAAAGACATTCTTCTTGGTGTAGAATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATTATGATCTTTGTTTTGAAAGACATTCTTCTTGGTGTAGAATT  240

seq1  AAAGGTGTATTTATTTTACTGAAGTTCCCATTTCATTAGTTTCTTGCCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGTATTTATTTTACTGAAGTTCCCATTTCATTAGTTTCTTGCCCC  290

seq1  CACTGTTTTTGTTGAGATGTCAGCTATAAATCTGATTTACACTCCACCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTTTGTTGAGATGTCAGCTATAAATCTGATTTACACTCCACCAT  340

seq1  AGGTAATATGTATTTTTTTGTGAGTGTCTTTAAAAGTACCTTTAGTTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATATGTATTTTTTTGTGAGTGTCTTTAAAAGTACCTTTAGTTTTC  390

seq1  TTCTTCATTTTACCAGAGAATAGCTAAATATGGGTCTCATGTGTATATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTTTACCAGAGAATAGCTAAATATGGGTCTCATGTGTATATAA  440

seq1  TGACTGTGTATCTTCTAACTATTTATAATTCATCACCTACCTATTTGCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGTATCTTCTAACTATTTATAATTCATCACCTACCTATTTGCAA  490

seq1  TTTTTGTATGTCTTCGTGTTTATGGAACACACTGGAACACATAGATTCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATGTCTTCGTGTTTATGGAACACACTGGAACACATAGATTCAG  540

seq1  CTCTAGTATTTCACCTTCCTGCTGAAATCCCAGGGTTAGTTGGACGTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTATTTCACCTTCCTGCTGAAATCCCAGGGTTAGTTGGACGTGTT  590

seq1  ACTCATCTCCTACAGTCAGGTACTTTTAGGAGAAAATAACACTGCCTTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTCCTACAGTCAGGTACTTTTAGGAGAAAATAACACTGCCTTAC  640

seq1  TGAATTTCCATTTTCTCCACTGTCTTTCCCTAGAGTTCGCTACTGCATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCCATTTTCTCCACTGTCTTTCCCTAGAGTTCGCTACTGCATTC  690

seq1  ATATGTCTCTGAAAGGAGTGAAGAGTGTAATCAATACACCCCATTAAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTCTGAAAGGAGTGAAGAGTGTAATCAATACACCCCATTAAAAA  740

seq1  CACAGTGTGGTGTTCTGAGACGAATTGTATTTGTTCCTTTAAGAAGAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTGGTGTTCTGAGACGAATTGTATTTGTTCCTTTAAGAAGAGGA  790

seq1  ATATAAATTAATCATGAGTATTTTTTTCTTTAAAACTTCCACAGATTCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTAATCATGAGTATTTTTTTCTTTAAAACTTCCACAGATTCAT  840

seq1  AGTGTGACATAGTTTCAATATGTTGCTGCAAATGTATAAATAGATAATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACATAGTTTCAATATGTTGCTGCAAATGTATAAATAGATAATTA  890

seq1  ATGGAAAAATTATCTCTGAATACTAATAATTATCTCTGAATTTCTTTCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAATTATCTCTGAATACTAATAATTATCTCTGAATTTCTTTCTA  940

seq1  TATTATTTCAAAGGAAGCTTGCGTGTATCGCAGAACTCATAGTGAGTCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTCAAAGGAAGCTTGCGTGTATCGCAGAACTCATAGTGAGTCCC  990

seq1  AAGATAATTTTTCAGTTATAACAATTTTTTCTAGTATGTTTTAAAAACAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATTTTTCAGTTATAACAATTTTTTCTAGTATGTTTTAAAAACAA  1040

seq1  TGCTTTTTCTTACTTTGGAATTAAACTTGGATCTTCAATTAATCAAACTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTCTTACTTTGGAATTAAACTTGGATCTTCAATTAATCAAACTG  1090

seq1  AGGGTGATTAAAATACCTAATGAGAAGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  AGGGTGATTAAAATACCTAATGAGAAGAATTC  1122