BAC Information

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BAC

Clone NameB6Ng01-062D20
Chromosome10 (Build37)2 (Build37)
Map Location 128,764,320 - 128,765,464148,460,841 - 148,461,382
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780
Downstream geneOlfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062D20.bB6Ng01-062D20.g
ACCDH882698DH882699
length1,126949
definitionDH882698|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D20, 5' end.DH882699|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(128,764,320 - 128,765,464)(148,460,841 - 148,461,382)
sequence
gaattcttttctgaaaggggtgcttttccatggggcagatataaaagaag
ggcatgtcaagatggaaaataaaaatccagcctaggtcatatttatctac
catttaacatttttctcctctcacatataaatatagtttctagaaccaca
aataccacaagtgcttagatcccagacttttaaacagatttgatctttca
ttgagtgtcttcctgcctcatcctttattacattcagcttgctctttttc
ctttccatgttcttaaagaaatgaaatagttgatctgaattaagagccat
catatgtttaagatcagtccagaaacaacagaaaagtgcattgtttccag
tgaatctgttttcagtgacagaacaaatgggtattggatgaataaataaa
acaacttgtagttttattgtaaaaagaaaaaaaattctgataaatattgc
taaaaaatatatattctctactcttgctatttctttctatgtggatatac
attccattgaagtataattttttaaaacttaaaatttcatttgtacaaac
agaataggtggttaacacaaatagaacattttgctaaattaaattttttt
agtgacatcatgtgacatcagatggcaaagctgttcaaacaagaatccag
agtatatatgctatatgattatacatctatctacataatttcctaacata
cattaggctacttagtgacctctacagttttgtcgattgtcttttcaatt
ataagctatgtgtaagatcatacattccatacaataagtaaaaaacaaca
ttaagcacacacacatttttttggaaaatttaaatatatttcagatgacc
tgttaaagagtggctttataaagtcttaaagttaaatttctttttatttc
taagatttcaaaactttttctcaatttacttgagcagttatcctgaactc
tttctctatctgttcccttgggttgaaaagcgacatttgacagctgaatt
tttatcaagatatgggaaaacttaggatctcttttatcaattgatgtatt
gttacaatttaaaaagtattacaatgcagctgatactcccatcctcacct
tctcatttctttctgccatccatcaa
gaattctttgtacattttgaagaaatgatctttataatttactgatttgt
gaatattttatccagctttatcacttgcattatattctctgaacagtttt
gtttttttatagatattttaaaatactatttccatcgggtcttcagaatt
atctgaatagagctttatgtcacaagttaataaactgtttttggaaggaa
caacattatcaaaatatactgtataaaaattgtctctatattattactgt
actttaaaatcaaaatttaatcattgctgtatctagagtgggtttacatg
acattttcatacacaaataatgtattttgctcttagccaactttctggca
ccctcttgttcccttgttcacagtttgctgatcccttcctttaaatactc
cttctgctttcatgtcatacacatgcacatatagatatgtatacatgaag
ttatgtgtatattcatgtatacatacactttttaaaaatatttttaatta
ggtattttcctcatttacatttcaaatgccatcccaaaagtcccccatac
acgccccccactcccctacccacccactcccactttttggccctggctaa
ccctgtactggggcatataaagtttgcaagtccaatgggcctctctttcc
agtgatgacggactaggccatcttctgatacatatgcagctagagtcaag
agttccggggtactggttagttaataatgttgttccacctatagggttgc
agattcctttagctccttgggtactttctctagctcctccattgggggcc
ctgtgatccatccaatagctgactgtgagcatccacttatgtgtttgcta
ggccccggcatagtctcacaagagacagctatatcagggtcctttcagca
aaatcttgctagtgtatggaatgatgtcagcgtttggaagctgattatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128764320_128765464
seq2: B6Ng01-062D20.b_38_1163

seq1  GAATTCTTTTCTGAAAGGGGTGCTTTTCCATGGGGCAGATATAAAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTGAAAGGGGTGCTTTTCCATGGGGCAGATATAAAAGAAG  50

seq1  GGCATGTCAAGATGGAAAATAAAAATCCAGCCTAGGTCATATTTATCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCAAGATGGAAAATAAAAATCCAGCCTAGGTCATATTTATCTAC  100

seq1  CATTTAACATTTTTCTCCTCTCACATATAAATATAGTTTCTAGAACCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACATTTTTCTCCTCTCACATATAAATATAGTTTCTAGAACCACA  150

seq1  AATACCACAAGTGCTTAGATCCCAGACTTTTAAACAGATTTGATCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCACAAGTGCTTAGATCCCAGACTTTTAAACAGATTTGATCTTTCA  200

seq1  TTGAGTGTCTTCCTGCCTCATCCTTTATTACATTCAGCTTGCTCTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTCTTCCTGCCTCATCCTTTATTACATTCAGCTTGCTCTTTTTC  250

seq1  CTTTCCATGTTCTTAAAGAAATGAAATAGTTGATCTGAATTAAGAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATGTTCTTAAAGAAATGAAATAGTTGATCTGAATTAAGAGCCAT  300

seq1  CATATGTTTAAGATCAGTCCAGAAACAACAGAAAAGTGCATTGTTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTTAAGATCAGTCCAGAAACAACAGAAAAGTGCATTGTTTCCAG  350

seq1  TGAATCTGTTTTCAGTGACAGAACAAATGGGTATTGGATGAATAAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTGTTTTCAGTGACAGAACAAATGGGTATTGGATGAATAAATAAA  400

seq1  ACAACTTGTAGTTTTATTGTAAAAAGAAAAAAAATTCTGATAAATATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGTAGTTTTATTGTAAAAAGAAAAAAAATTCTGATAAATATTGC  450

seq1  TAAAAAATATATATTCTCTACTCTTGCTATTTCTTTCTATGTGGATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATATATATTCTCTACTCTTGCTATTTCTTTCTATGTGGATATAC  500

seq1  ATTCCATTGAAGTATAATTTTTTAAAACTTAAAATTTCATTTGTACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTGAAGTATAATTTTTTAAAACTTAAAATTTCATTTGTACAAAC  550

seq1  AGAATAGGTGGTTAACACAAATAGAACATTTTGCTAAATTAAATTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGTGGTTAACACAAATAGAACATTTTGCTAAATTAAATTTTTTT  600

seq1  AGTGACATCATGTGACATCAGATGGCAAAGCTGTTCAAACAAGAATCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATCATGTGACATCAGATGGCAAAGCTGTTCAAACAAGAATCCAG  650

seq1  AGTATATATGCTATATGATTATACATCTATCTACATAATTTCCTAACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATATGCTATATGATTATACATCTATCTACATAATTTCCTAACATA  700

seq1  CATTAGGCTACTTAGTGACCTCTACAGTTTTGTCGATTGTCTTTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGCTACTTAGTGACCTCTACAGTTTTGTCGATTGTCTTTTCAATT  750

seq1  ATAAGCTATGTGTAAGATCATACATTCCATACAATAAGTAAAAAACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTATGTGTAAGATCATACATTCCATACAATAAGTAAAAAACAACA  800

seq1  TTAAGCACACACACATTTTTTTGGAAAATTTAAATATATTTCAGATGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACACACACATTTTTTTGGAAAATTTAAATATATTTCAGATGACC  850

seq1  TGTTAAAGAGTGGCTTTATAAAGTCTTAAAGTTAAATTTCTTTTTTATTT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTTAAAGAGTGGCTTTATAAAGTCTTAAAGTTAAATTTC-TTTTTATTT  899

seq1  CTAAGATTTCAAAAACTTTTTCTCAATTTACTTGAGCAGTTATCCTGAAC  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTTC-AAAACTTTTTCTCAATTTACTTGAGCAGTTATCCTGAAC  948

seq1  TCTTTCTCCTATCTGTTCCCTTGGGTTGAAAAAGCGACATTTGACAGCTG  1000
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TCTTTCT-CTATCTGTTCCCTTGGGTTG-AAAAGCGACATTTGACAGCTG  996

seq1  AATTTTTATCAAGAATATGGGATAACTTAGGTATCTCCTTTTATCAATTG  1050
      ||||||||||||| |||||||| |||||||| |||| |||||||||||||
seq2  AATTTTTATCAAG-ATATGGGAAAACTTAGG-ATCT-CTTTTATCAATTG  1043

seq1  AATGTATTGTTTAACAATTTAAAAAGTATATACAATGCAGTCTGATTACT  1100
       ||||||||||  |||||||||||||||| |||||||||| |||| ||||
seq2  -ATGTATTGTT--ACAATTTAAAAAGTAT-TACAATGCAG-CTGA-TACT  1087

seq1  CCCATCCTCCATCTTCTCATATCCCTTTCTGCCCATCCCAATCAA  1145
      |||||||| || |||||||| |  ||||||| ||||||  |||||
seq2  CCCATCCT-CACCTTCTCATTT--CTTTCTG-CCATCC--ATCAA  1126

seq1: chr2_148460841_148461382
seq2: B6Ng01-062D20.g_545_949 (reverse)

seq1  ATATAGCTGTCTCTTGTGAGGCTAAGCCTGGGCCTAGCAAACACAGTCAT  50
      |||||||||||||||||||| ||| ||| ||||||||||||||||     
seq2  ATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACA-----  45

seq1  ATATTAGCCGGGGCCTAGCAAACACAGTCATATATTAGCCGGGGCCTAGC  100
                     ||        |||              ||      
seq2  ---------------TA--------AGT--------------GG------  52

seq1  AAACACAGTCATATATTAGCATATATATATATATATATATATATATATAT  150
                    ||  ||                              
seq2  --------------AT--GC------------------------------  56

seq1  ATATATATATATATATATATATATATATCACAGTCAGCTATTGGATGAAT  200
                                 |||||||||||||||||||| ||
seq2  ---------------------------TCACAGTCAGCTATTGGATGGAT  79

seq1  CACAGGACCCCCAATGGAAGAGCTAGAGAAAGTACCCAAGGAGCTAAAGG  250
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  CACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGG  129

seq1  GGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCC  300
        |||||||||||||||||||||||||| ||| ||||||||||||     
seq2  AATCTGCAACCCTATAGGTGGAACAACATTATTAACTAACCAGTA-----  174

seq1  ACACACACCCCCAGAGCTCATGTCTCTAGCTGCATATGTGTCATAAGATA  350
              |||| || ||| || |||||||||||||||| ||| ||||| 
seq2  --------CCCCGGAACTCTTGACTCTAGCTGCATATGTATCAGAAGATG  216

seq1  GCCTAGTCGGCCATCATTGGAAAGAGAGTCCCATTGGTATTGCAAACTTT  400
      |||||||| | ||||| ||||||||||| ||||||||  |||||||||||
seq2  GCCTAGTCCGTCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTT  266

seq1  ATATGCTTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGGGTAG  450
      ||||||  ||||||||||  | ||||||||||| |||||||||||||| |
seq2  ATATGCCCCAGTACAGGGTTA-GCCAGGGCCAAAAAGTGGGAGTGGGTGG  315

seq1  GTAGGGGAGTTTTTTTTGGGGGGGGGAGGGTATGGGGGACTTTTGGGATA  500
      ||||||||||          |||||| | |||||||||||||||||||| 
seq2  GTAGGGGAGT----------GGGGGGCGTGTATGGGGGACTTTTGGGATG  355

seq1  GCATTGGAAATGTAAATGAAGAAAATACATAAT--------TTTTTAAAA  542
      ||||| ||||||||||||| |||||||| ||||        |||||||||
seq2  GCATTTGAAATGTAAATGAGGAAAATACCTAATTAAAAATATTTTTAAAA  405