BAC Information

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BAC

Clone NameB6Ng01-062G23
Chromosome10 (Build37)
Map Location 32,476,643 - 32,477,817
singlet/doubletsinglet
Overlap geneTcba1
Upstream genenone
Downstream geneEG667761, Trdn, A330019N05Rik, LOC100040686
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062G23.bB6Ng01-062G23.g
ACCDH882832DH882833
length2781,149
definitionDH882832|Mus musculus domesticus DNA, BAC clone: B6Ng01-062G23, 5' end.DH882833|Mus musculus domesticus DNA, BAC clone: B6Ng01-062G23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcaactgaggaataacaaatggctgagaagcacctagaaaaatgttcaac
acccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcagatcagtcagaatggctaagatatgtatatgtagctgtatatgtagt
gaaggatggcctagttggttatcaatgggaggagaggccctaggttctgt
gaaggatctatgccccagtatatgggaatgccaggactgggaatggtact
gggtggattggggagcagggggagggga

gaattcactatgtagatcaggctgtcctcagactcacagacattctcctg
tctctacatcctaagcactgggattaaagatgtttgccaccataccaggc
atgagacatttttaaatggcttggtttctgtcaactttttgcataatcca
gtatttcattcagacatgactcaccttgaaggatatgcttgttttttgtt
tgttttttccattttttaaagatacggtgacatatcatgccatatgaatc
aattggaaaatatgttttaaattaagtttaaactattgatttcctacgta
ctttgaagggtggaattgagagatactaagattttcaagaagactggagg
aaactagtctttaatctttgccctgttacctcatgttcttaaagaaatag
agttacaattaaggagattagggctttattgattctttctagataccact
catgccaggaatgcttacttaatactgaataactctgcaaattcaccatg
ccttccattgttccttctcgtctgaatctgatcacaacaaaacttagtct
ggaaggtgttttaagttgaatgctatttgtccaaggacttcccatggtga
aacaacatcaagtttatccagttttagagaaaaaaatatttagaaaaaat
ttaaagattaaatgacatctgaagatagactgtgagaccttaataatagt
atcctttcaggaaaaggtacctcaaagctcacagttgctcggccagtgcc
tatgagttcaccctgaggaagggaacacctgcaaactggaagcggttcct
gagcaggagctctaatgtgctgacaacctaatcttgaactttcagcctcc
ccaaaattgtgatctaagctgtcagtcagttgcttgagccctttagtacg
tggccctcttatatggccacccgaccatattcagaatgtcattataagat
aggtatatgtaaatatcatgatagcccagcatagaatcaatgctgtatgt
gactatagtattagtcttgtagaagcctccatttaaccatgcaggactta
ttacattactatattcttggacaccaatcaatatccataatacatatagg
ggagaataaactctttcctttcttaccaattctgacccctcgaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32476643_32477817
seq2: B6Ng01-062G23.g_66_1214

seq1  GAATTCACTATGTAGATCAGGCTGTCCTCAGACTCACAGACATTCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGATCAGGCTGTCCTCAGACTCACAGACATTCTCCTG  50

seq1  TCTCTACATCCTAAGCACTGGGATTAAAGATGTTTGCCACCATACCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACATCCTAAGCACTGGGATTAAAGATGTTTGCCACCATACCAGGC  100

seq1  ATGAGACATTTTTAAATGGCTTGGTTTCTGTCAACTTTTTGCATAATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACATTTTTAAATGGCTTGGTTTCTGTCAACTTTTTGCATAATCCA  150

seq1  GTATTTCATTCAGACATGACTCACCTTGAAGGATATGCTTGTTTTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCATTCAGACATGACTCACCTTGAAGGATATGCTTGTTTTTTGTT  200

seq1  TGTTTTTTCCATTTTTTAAAGATACGGTGACATATCATGCCATATGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTCCATTTTTTAAAGATACGGTGACATATCATGCCATATGAATC  250

seq1  AATTGGAAAATATGTTTTAAATTAAGTTTAAACTATTGATTTCCTACGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAAAATATGTTTTAAATTAAGTTTAAACTATTGATTTCCTACGTA  300

seq1  CTTTGAAGGGTGGAATTGAGAGATACTAAGATTTTCAAGAAGACTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGGGTGGAATTGAGAGATACTAAGATTTTCAAGAAGACTGGAGG  350

seq1  AAACTAGTCTTTAATCTTTGCCCTGTTACCTCATGTTCTTAAAGAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGTCTTTAATCTTTGCCCTGTTACCTCATGTTCTTAAAGAAATAG  400

seq1  AGTTACAATTAAGGAGATTAGGGCTTTATTGATTCTTTCTAGATACCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAATTAAGGAGATTAGGGCTTTATTGATTCTTTCTAGATACCACT  450

seq1  CATGCCAGGAATGCTTACTTAATACTGAATAACTCTGCAAATTCACCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGGAATGCTTACTTAATACTGAATAACTCTGCAAATTCACCATG  500

seq1  CCTTCCATTGTTCCTTCTCGTCTGAATCTGATCACAACAAAACTTAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATTGTTCCTTCTCGTCTGAATCTGATCACAACAAAACTTAGTCT  550

seq1  GGAAGGTGTTTTAAGTTGAATGCTATTTGTCCAAGGACTTCCCATGGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTGTTTTAAGTTGAATGCTATTTGTCCAAGGACTTCCCATGGTGA  600

seq1  AACAACATCAAGTTTATCCAGTTTTAGAGAAAAAAATATTTAGAAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATCAAGTTTATCCAGTTTTAGAGAAAAAAATATTTAGAAAAAAT  650

seq1  TTAAAGATTAAATGACATCTGAAGATAGACTGTGAGACCTTAATAATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTAAATGACATCTGAAGATAGACTGTGAGACCTTAATAATAGT  700

seq1  ATCCTTTCAGGAAAAGGTACCTCAAAGCTCACAGTTGCTCAGGCCAGTGC  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCCTTTCAGGAAAAGGTACCTCAAAGCTCACAGTTGCTC-GGCCAGTGC  749

seq1  CTATGAGTTCACCCTGAGGAAGGGAACACCTGCAAACTGGAAGCGGTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTCACCCTGAGGAAGGGAACACCTGCAAACTGGAAGCGGTTCC  799

seq1  TGAGCAGGAGCTCTAATGTGCTGACAACCTAATCTTGAACTTTCAGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGGAGCTCTAATGTGCTGACAACCTAATCTTGAACTTTCAGCCTC  849

seq1  CCCAAAATTGTGATCTAAGCTGTCAGTCAGTTGCTTGAGCCCTTTAGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATTGTGATCTAAGCTGTCAGTCAGTTGCTTGAGCCCTTTAGTAC  899

seq1  GTGGCCCTCTTATTATGGCAACCCGACCCATATTCAGAATGTCATTATAA  950
      |||||||||||| |||||| |||||| ||||||||||||||||||||| |
seq2  GTGGCCCTCTTA-TATGGCCACCCGA-CCATATTCAGAATGTCATTAT-A  946

seq1  AGATAAGGTAATATGTAAATATCATGATAGCCCAAGCATCAGAATCAATG  1000
      |||| |||| ||||||||||||||||||||||| ||||| ||||||||||
seq2  AGAT-AGGT-ATATGTAAATATCATGATAGCCC-AGCAT-AGAATCAATG  992

seq1  CTGTATGTTGACTAATAGTATTAGTCTTGTAG-AGCCTTCATTTTAACCA  1049
      ||||||| ||||| |||||||||||||||||| ||||| || ||||||||
seq2  CTGTATG-TGACT-ATAGTATTAGTCTTGTAGAAGCCTCCA-TTTAACCA  1039

seq1  TGCAAAGACTTATTACATTAACTTATTTCCTGGACACCAATCAATAATCC  1099
      ||| | ||||||||||||| |||   ||| ||||||||||||||| ||||
seq2  TGC-AGGACTTATTACATT-ACTATATTCTTGGACACCAATCAAT-ATCC  1086

seq1  CATAAAATACAATTATAGGAGAGAAATAAAACTACTTTCTCTTTTCTTTC  1149
         | ||||||  |||||| ||| ||||||        |||||| |||||
seq2  ---ATAATACA--TATAGGGGAG-AATAAA--------CTCTTTCCTTTC  1122

seq1  --ACTAATTCTGACCCTCTGTAAAAAAA  1175
        || ||||||||||| ||  |||||||
seq2  TTACCAATTCTGACCC-CTCGAAAAAAA  1149


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