BAC Information

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BAC

Clone NameB6Ng01-063G01
Chromosome10 (Build37)
Map Location 40,174,551 - 40,175,616
singlet/doubletsinglet
Overlap geneCdc2l6
Upstream geneFyn, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, LOC666374
Downstream geneSlc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063G01.bB6Ng01-063G01.g
ACCDH883495DH883496
length5521,060
definitionDH883495|Mus musculus domesticus DNA, BAC clone: B6Ng01-063G01, 5' end.DH883496|Mus musculus domesticus DNA, BAC clone: B6Ng01-063G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgcccaaggtctgctcagggcaccagaccagaccagaaggagtacctgg
gcatttttaattgtcatagaaatttacatctgggaatgaatatacccaaa
tattattatttacagcttcattcctttacctgcaagtttcatgtttttac
agatggatgaaattccaatgtgtaaattgttaactaactaactaaggata
tagtctaggactcccttgatattcagggcttctctttctctgactttgtc
tggggaattcaaacccccctacacacacacacacacacatctaccagtta
gattactggttcaacttcctttcttctgggctcatttctctctgggctca
ctctctgagaactcctatcttcctgtagagacacctactcatccatgtcc
actgctgctccagtcaccatagctgggattggaaacagcctcgatgctcg
atagatgctgagtgggataagaacccattcagctggcccctgatactcct
gtaaagcttccccatgctaatgaggttatataattcctttttccttcagc
ct
gaattcaccttcattgataactgtcttgtcacgaaggactgacagttaag
tcgctttttcccccttcttggttctttcttattatttgttctatttttat
tttaccactcatatgttttcttttaggcatttattgaagacatacatttg
cttggcaaagctgaaaagggctattccctcccaagagaaacagtcataca
gacatttggctatgcagtggggtagattctttattatagtacctcagcca
cagctgccttctgaaggtagagaaggaaaactggactaaaagctatgcct
tgctcactctttgaagtcatgactaaggctcctgtcctgagacttttctc
tccggatagcctggggatagtcactgatttcctccccgaaagggctgact
gacaggtgcctgctagttgccctttgtagcttctgggaatgaactgcttt
tctttcttttttttttttttttttaaagatttatgtaagtacactgtagc
tgtcttcagacactccagaagagggagtcagatctcattacggatggttt
tgagccaccatgtggttgctgggatttgaactccagacctttggaagagc
agtcaggtgctcttactcactgagccatctcaccagccctgaactgcttt
tcttgagtccctgcattaccatctgccacgtagcccttctcaagctgccc
ctcttctctgaaacactgatggtcttccttcagttttaaatggaatctta
cctctgcacaccagtgcaaacacagctcttacccccaagtgaaaagtgcc
aaacaagagttactgtgacctcccagtgtggattcaggttgcctaataag
cttgtaggagcagttatacaaacttttgtagtcacagaaacaaaagaaag
cctctatcaaggcattcccaaatgcatgggcaaagcatcagaaagacaga
tgcttaaagaggacttagagcaaagctggtggtgggaatgtgatgaggac
gtggcagtggtccctcctgctgtggctcagtaccttagctggggagtctc
tgagccgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40174551_40175616
seq2: B6Ng01-063G01.g_68_1127

seq1  GAATTCACCTTCATTGATAACTGTCTTGTCACGAAGGACTGACAGTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTCATTGATAACTGTCTTGTCACGAAGGACTGACAGTTAAG  50

seq1  TCGCTTTTTCCCCCTTCTTGGTTCTTTCTTATTATTTGTTCTATTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTTTCCCCCTTCTTGGTTCTTTCTTATTATTTGTTCTATTTTTAT  100

seq1  TTTACCACTCATATGTTTTCTTTTAGGCATTTATTGAAGACATACATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACTCATATGTTTTCTTTTAGGCATTTATTGAAGACATACATTTG  150

seq1  CTTGGCAAAGCTGAAAAGGGCTATTCCCTCCCAAGAGAAACAGTCATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAAAGCTGAAAAGGGCTATTCCCTCCCAAGAGAAACAGTCATACA  200

seq1  GACATTTGGCTATGCAGTGGGGTAGATTCTTTATTATAGTACCTCAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGGCTATGCAGTGGGGTAGATTCTTTATTATAGTACCTCAGCCA  250

seq1  CAGCTGCCTTCTGAAGGTAGAGAAGGAAAACTGGACTAAAAGCTATGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCTTCTGAAGGTAGAGAAGGAAAACTGGACTAAAAGCTATGCCT  300

seq1  TGCTCACTCTTTGAAGTCATGACTAAGGCTCCTGTCCTGAGACTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACTCTTTGAAGTCATGACTAAGGCTCCTGTCCTGAGACTTTTCTC  350

seq1  TCCGGATAGCCTGGGGATAGTCACTGATTTCCTCCCCGAAAGGGCTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATAGCCTGGGGATAGTCACTGATTTCCTCCCCGAAAGGGCTGACT  400

seq1  GACAGGTGCCTGCTAGTTGCCCTTTGTAGCTTCTGGGAATGAACTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTGCCTGCTAGTTGCCCTTTGTAGCTTCTGGGAATGAACTGCTTT  450

seq1  TCTTTCTTTTTTTTTTTTTTTTTTAAAGATTTATGTAAGTACACTGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTTTTTTTTTTTTTTTAAAGATTTATGTAAGTACACTGTAGC  500

seq1  TGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTACGGATGGTTT  550

seq1  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGACCTTTGGAAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGACCTTTGGAAGAGC  600

seq1  AGTCAGGTGCTCTTACTCACTGAGCCATCTCACCAGCCCTGAACTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGTGCTCTTACTCACTGAGCCATCTCACCAGCCCTGAACTGCTTT  650

seq1  TCTTGAGTCCCTGCATTACCATCTGCCACGTAGCCCTTCTCAAGCTGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTCCCTGCATTACCATCTGCCACGTAGCCCTTCTCAAGCTGCCC  700

seq1  CTCTTCTCTGAAACACTGATGGTCTTCCTTCAGTTTTAAATGGAATCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTGAAACACTGATGGTCTTCCTTCAGTTTTAAATGGAATCTTA  750

seq1  CCTCTGCACACCAGTGCAAACACAGCTCTTACCCCCAAGTGAAAAGTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCACACCAGTGCAAACACAGCTCTTACCCCCAAGTGAAAAGTGCC  800

seq1  AAACAAGAGTTACTGTGACCTCCCAGTGTGGATTCAGGTTGCCTAAT-AG  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAACAAGAGTTACTGTGACCTCCCAGTGTGGATTCAGGTTGCCTAATAAG  850

seq1  CTTGTAGGAGCAGTTATAACAAACTTTTGTAGTCACAG-AACAAAAGAAA  898
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  CTTGTAGGAGCAGTTAT-ACAAACTTTTGTAGTCACAGAAACAAAAGAAA  899

seq1  GCCTTCTATCAAGGCATTCCCAAATGCATGGGCAGAAGCATCAGATAGAC  948
      ||| |||||||||||||||||||||||||||||| |||||||||| ||||
seq2  GCC-TCTATCAAGGCATTCCCAAATGCATGGGCA-AAGCATCAGAAAGAC  947

seq1  AGATGCTTAGAGAGGATCTTAGAGCAGAGCTGGGTGGTGGGAATGTGATG  998
      ||||||||| |||||| ||||||||| |||| ||||||||||||||||||
seq2  AGATGCTTAAAGAGGA-CTTAGAGCAAAGCT-GGTGGTGGGAATGTGATG  995

seq1  AGGACGGGGGCAGGTGGGCCGCTCTGCTGTGGGCTCAGTACCCTAGCTGG  1048
      ||||| | |||| |||| ||   ||||||| ||||||||||| |||||||
seq2  AGGAC-GTGGCA-GTGGTCCCTCCTGCTGT-GGCTCAGTACCTTAGCTGG  1042

seq1  TGAAGTTCTGAGCTGTCA  1066
       ||   ||||||| ||||
seq2  GGAGTCTCTGAGCCGTCA  1060