BAC Information

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BAC

Clone NameB6Ng01-064A09
Chromosome10 (Build37)
Map Location 108,711,978 - 108,713,133
singlet/doubletsinglet
Overlap genenone
Upstream genePpp1r12a, Pawr, EG667814, Syt1, EG368203
Downstream geneNav3, LOC100042497, LOC100042502, LOC100042506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064A09.bB6Ng01-064A09.g
ACCDH883937DH883938
length1,1531,020
definitionDH883937|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A09, 5' end.DH883938|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactgtcttggtaagacaatttcacattaaagtcataattttt
gtttacggtgtgtcactgccttgttcagtagagagactagagacattagg
aaaggaagtgactttaatactaggccattctctagtacttgagggggttc
actccagaaataaacaatgtttgtcacagttcatttccctgttgtttctt
tagggaaatagatgtgacacttcagtgccaacacggaaaaaaaaaaaccc
acatgaataaagagaaattgctttatcttcagatgcacttatgacctaaa
aagggatgtcagctggagcccatctctctgcccccacctcttctctgagt
tccgacctcctgatgttcttgttgatgtctgaaccagaagagcttttgtg
cactttcaagagaatattctgaactgaaaattcactaaattcatttctag
tctgctcacacctcgagttataaaatagatacttccggagttagatagag
ggcaacagagaataatgacataagtctggtattcacgataattacttact
atctgtttgcaaacttagatattaatataagcattcgatatttgttaaag
ttatttccacaatattaaataatagtattttatgtgtatagtgcttgtct
gcatatgtgtctgtgtagtacattcattccagttacccactggggctcaa
aggatgttgtattttcctgggactggagttttagatgggtgtcagcagcc
acgtgggtgctgggaatcaaaatccagtgctctggaagagcagtacatgc
tcttaaccatttgagccatctttcctataacatttgataaccagatttta
taactcctgtattattcattgtgacattggaattgtcaattgctagatgt
atatccatattatttcatatacaccagcttaaaatatatatacatatata
tcacataaattaagactttagcacatagcaaggtctcagagttagaaggt
tattttttgtaaatcaaggtttgaagcatgttagataattggcaaaagtc
aagcagttgttagaaacaaacaaaaccttccttgggctgaatagcacaga
aatgtaaacaatatagtttgtttgcctaaaattttcatattatattaagt
tgc
gaattcctttaagtacggtaacttttggcactctggaccactggtgtttc
cacacttcagatctctgtacctcatactcagcaagcagtattttgtcccc
agaggagctatgactgaagttagtttattaataataagcttgaaagatac
agtataaagacagagaagaatcattcatcctgcatagacagtccctagga
gaatgtggtcctagaataactggtagcttacaaagccatggaaatggata
tcttctactgaatcagaaactctaaaaaaaaaaaaaaaaaaactctagtt
tgtgcgacatagtgtggaagcagagaagtcagataggatttgtgtgaaga
tacagtttgcattgcttcatataacagctcttacttggatgctccatcct
taactggcttgaagggatttcatatactaccaaagaaaagtaagcaccga
tctcactaacctttgaactctgcaagcaataacaatgctttgcctaacaa
tgttattcccattggtagaatactggcatgaatattacgggagtaaccaa
ccactttttaaatggctctaaggcctagtaataacgtcaagaacctatga
ctagatcggtcctagaggagaactaaatactagtattcttttaaatggac
atagtattaaaatgatacctaatgactcatttattgctcagtgcatctct
caatccttattaaggaagcttttaattgaagtatgtggcactttgcatag
aagctctcaatcaatcagtaggcagtacatatgagattttggagttctca
gctttaaagggaacacatatatcatacagcttatcttaggcttaggatca
tggtagggctaaatatagaaagatataaagaccaaagagatatatacata
tattgtgtatgtgtgtgtgtgtatgtatgtatatacatatatggacccta
tatatattatgtatatgtatagtattgatgactatatgtgtatggtaata
tatctatcaagagaagacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108711978_108713133
seq2: B6Ng01-064A09.b_44_1196

seq1  GAATTCAAACTGTCTTGGTAAGACAATTTCACATTAAAGTCATAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGTCTTGGTAAGACAATTTCACATTAAAGTCATAATTTTT  50

seq1  GTTTACGGTGTGTCACTGCCTTGTTCAGTAGAGAGACTAGAGACATTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACGGTGTGTCACTGCCTTGTTCAGTAGAGAGACTAGAGACATTAGG  100

seq1  AAAGGAAGTGACTTTAATACTAGGCCATTCTCTAGTACTTGAGGGGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGTGACTTTAATACTAGGCCATTCTCTAGTACTTGAGGGGGTTC  150

seq1  ACTCCAGAAATAAACAATGTTTGTCACAGTTCATTTCCCTGTTGTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAATAAACAATGTTTGTCACAGTTCATTTCCCTGTTGTTTCTT  200

seq1  TAGGGAAATAGATGTGACACTTCAGTGCCAACACGGAAAAAAAAAAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAATAGATGTGACACTTCAGTGCCAACACGGAAAAAAAAAAACCC  250

seq1  ACATGAATAAAGAGAAATTGCTTTATCTTCAGATGCACTTATGACCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATAAAGAGAAATTGCTTTATCTTCAGATGCACTTATGACCTAAA  300

seq1  AAGGGATGTCAGCTGGAGCCCATCTCTCTGCCCCCACCTCTTCTCTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGTCAGCTGGAGCCCATCTCTCTGCCCCCACCTCTTCTCTGAGT  350

seq1  TCCGACCTCCTGATGTTCTTGTTGATGTCTGAACCAGAAGAGCTTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACCTCCTGATGTTCTTGTTGATGTCTGAACCAGAAGAGCTTTTGTG  400

seq1  CACTTTCAAGAGAATATTCTGAACTGAAAATTCACTAAATTCATTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCAAGAGAATATTCTGAACTGAAAATTCACTAAATTCATTTCTAG  450

seq1  TCTGCTCACACCTCGAGTTATAAAATAGATACTTCCGGAGTTAGATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCACACCTCGAGTTATAAAATAGATACTTCCGGAGTTAGATAGAG  500

seq1  GGCAACAGAGAATAATGACATAAGTCTGGTATTCACGATAATTACTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGAGAATAATGACATAAGTCTGGTATTCACGATAATTACTTACT  550

seq1  ATCTGTTTGCAAACTTAGATATTAATATAAGCATTCGATATTTGTTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTGCAAACTTAGATATTAATATAAGCATTCGATATTTGTTAAAG  600

seq1  TTATTTCCACAATATTAAATAATAGTATTTTATGTGTATAGTGCTTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCACAATATTAAATAATAGTATTTTATGTGTATAGTGCTTGTCT  650

seq1  GCATATGTGTCTGTGTAGTACATTCATTCCAGTTACCCACTGGGGCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTGTCTGTGTAGTACATTCATTCCAGTTACCCACTGGGGCTCAA  700

seq1  AGGATGTTGTATTTTCCTGGGACTGGAGTTTTAGATGGGTGTCAGCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTGTATTTTCCTGGGACTGGAGTTTTAGATGGGTGTCAGCAGCC  750

seq1  ACGTGGGTGCTGGGAATCAAAATCCAGTGCTCTGGAAGAGCAGTACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGGTGCTGGGAATCAAAATCCAGTGCTCTGGAAGAGCAGTACATGC  800

seq1  TCTTAACCATTTGAGCCATCTTTCCTATAACATTTGATAACCAGATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCATTTGAGCCATCTTTCCTATAACATTTGATAACCAGATTTTA  850

seq1  TAACTCCTGTATTATTCATTGTGACATTGGAATTGTCAATTGCTAGATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCTGTATTATTCATTGTGACATTGGAATTGTCAATTGCTAGATGT  900

seq1  ATATCCATATTATTTCATATACACCAGCTTAAAATATATATACATATATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATATTATTTCATATACACCAGCTTAAAATATATATACATATATA  950

seq1  TCAACATAAA-TAAGACTTTAGCAACATAGCAAGGTCTCAAGAGGTTAG-  998
      || ||||||| |||||||||||| ||||||||||||||| ||| ||||| 
seq2  TC-ACATAAATTAAGACTTTAGC-ACATAGCAAGGTCTC-AGA-GTTAGA  996

seq1  AGGTTA-TTTTTGTAGATCAAGGGTCTGAAGCATG-TAGATAATTGGCAA  1046
      |||||| |||||||| ||||| ||| ||||||||| ||||||||||||||
seq2  AGGTTATTTTTTGTAAATCAA-GGTTTGAAGCATGTTAGATAATTGGCAA  1045

seq1  AAGTCAAGCAGTTGGTTAGGAAACAAACAAAACCTTCCTTGGGCTG-ATA  1095
      ||||||||||||| |||| ||||||||||||||||||||||||||| |||
seq2  AAGTCAAGCAGTT-GTTA-GAAACAAACAAAACCTTCCTTGGGCTGAATA  1093

seq1  GCCACAGATATGTAAAC-ATATATGTTGTTTGCTTAAAATATTTCATATT  1144
      | |||||| |||||||| |||||  |||||||| |||||| |||||||||
seq2  G-CACAGAAATGTAAACAATATAGTTTGTTTGCCTAAAAT-TTTCATATT  1141

seq1  ATATATAGTTGC  1156
      ||||  ||||||
seq2  ATATTAAGTTGC  1153