BAC Information

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BAC

Clone NameB6Ng01-065D03
Chromosome10 (Build37)
Map Location 103,115,576 - 103,241,492
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D03.bB6Ng01-065D03.g
ACCDH884744DH884745
length7551,069
definitionDH884744|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D03, 5' end.DH884745|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,240,977 - 103,241,492)(103,115,576 - 103,116,503)
sequence
gaattcttttcttttcaattttgtattacgatattttcttcatttacatt
tcaagttctatcccgaaaatcccctataccctcctccccctctgcgccct
gctcccctacctacccactcccaattcttggccctagcgttcccctctac
tggggcatataaagtttgcaggaccaaggggcctctcttcccaatgatgg
ccgactaggcaatcttctgctacatatgcagctagagacatgagctgcac
tcactgagaagtggctattagcccagaaacttaggatacccaagatacaa
tttgcaaaacacaagaaaatcaagaaataagaagaccaacatgtggatac
gtcatccctccttagaatagggaagaaaataaccatggaaggagttacag
agacaaagtttggagctaagatgaaaggatggactatccagagactactc
cacccgggatccatcccataatcacccaccaaacgcacacactattgcac
atgccagcaagattttgctgaaaggaccctgatttagctgtctcttgtga
ggctatgccagtgcctgtcaaatacagaagtggatgctcagagtcatcta
ttggatggaatacagggcccctaatggaggagctagagaaattatccaag
gagctgaaggggtcttcaactctataggtggaacaacaatatgaactaac
caagagctgaattcttcacatgctaagaggagagtgatgatgctgaaata
gaatt
gaattcatttgttcaacttctctggtgtgtccataagatactattttctt
ctggccattcactgcctttgaatcttacagtaattctcctgaaatgattc
ctgaccctttcagtaaagtgctataatacttatgttacctttgaagctgg
gaattctcccatttcttattcttatattaccttctattgttactactgat
taacagggttaatcagtatctgttacaagcagaaggctctctggtaaatt
ttgagaaatgctctgatcaatgggagtaaaataaattattaggagttggt
ttaatactgtatcattttgtcattataatagtaatattatgacctataac
ttattcgaccataggttcttaatctgatcatggtgttaggtattgggttc
attgtttgagggaggagttacatataacccaaaagtgattggttactccc
aagatgtctacactactatgtaccagtggccatgtactggcaggcaagtc
atcatgaaaccctgcagaatccacttttcccttaactgtgaaaatgtgtc
agtaggaatagagctttcaggtgtataccagtttaattttgccatgttat
atgaccagagtatgtgctgtcttcagtaacagggtcttactgccacattc
tgggatgatatccaaccatactgaaatttccttgtgcgactcaagttctg
tgagatattattgtcgaaaaccttcaaactaagtagtaatgcctttttaa
caaaaattgtgcgtgtctgtgcatatatatatatatatatatatgatata
tagatctcttttatcttaaacccatatagttgaatgaaatgtattagaaa
atacatttttgctttacatcatgaatctttaatttgttttcaatgatcaa
tttcagtatttatacagcaagcttctctttataaataaaaagtgaacatg
tatttagagaaactagttaacgtgggagttcgtgttagaaagtagtttag
gacgttatcttgtaagttctattatcctatacctattacttccgctggag
gaaagtaaaatggaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103240977_103241492
seq2: B6Ng01-065D03.b_44_560 (reverse)

seq1  CAAAATCTTGCTGGCATGTGCAATAGTGTGTGCGTTTGGTGGGTGATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTGCTGGCATGTGCAATAGTGTGTGCGTTTGGTGGGTGATTAT  50

seq1  GGGATGGATCCCGGGTGGAGTAGTCTCTGGATAGTCCATCCTTTCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGATCCCGGGTGGAGTAGTCTCTGGATAGTCCATCCTTTCATCTT  100

seq1  AGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGTTATTTTCTTCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGTTATTTTCTTCCCTA  150

seq1  TTCTAAGGAGGGATGACGTATCCACATGTTGGTCTTCTTATTTCTTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGAGGGATGACGTATCCACATGTTGGTCTTCTTATTTCTTGATT  200

seq1  TTCTTGTGTTTTGCAAATTGTATCTTGGGTATCCTAAGTTTCTGGGCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTTTTGCAAATTGTATCTTGGGTATCCTAAGTTTCTGGGCTAA  250

seq1  TAGCCACTTCTCAGTGAGTGCAGCTCATGTCTCTAGCTGCATATGTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTCTCAGTGAGTGCAGCTCATGTCTCTAGCTGCATATGTAGCA  300

seq1  GAAGATTGCCTAGTCGGCCATCATTGGGAAGAGAGGCCCCTTGGTCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTGCCTAGTCGGCCATCATTGGGAAGAGAGGCCCCTTGGTCCTGC  350

seq1  AAACTTTATATGCCCCAGTAGAGGGGAACGCTAGGGCCAAGAATTGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTATATGCCCCAGTAGAGGGGAACGCTAGGGCCAAGAATTGGGAG  400

seq1  TGGGTAGGTAGGGGAGCAGGGCGCAGAGGGGGAGGAGGGTATAGGGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGTAGGGGAGCAGGGCGCAGAGGGGGAGGAGGGTATAGGGGATT  450

seq1  TTCGGGATAGAACTTGAAATGTAAATGAAGAAAATATC-TAATACAAAAT  499
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCGGGATAGAACTTGAAATGTAAATGAAGAAAATATCGTAATACAAAAT  500

seq1  TGAAAAGAAAAGAATTC  516
      |||||||||||||||||
seq2  TGAAAAGAAAAGAATTC  517

seq1: chr10_103115576_103116503
seq2: B6Ng01-065D03.g_223_1135

seq1  TCCCATTTCTTATTCTTATATTACCTTCTATTGTTACTACTGATTAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCTTATTCTTATATTACCTTCTATTGTTACTACTGATTAACAG  50

seq1  GGTTAATCAGTATCTGTTACAAGCAGAAGGCTCTCTGGTAAATTTTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATCAGTATCTGTTACAAGCAGAAGGCTCTCTGGTAAATTTTGAGA  100

seq1  AATGCTCTGATCAATGGGAGTAAAATAAATTATTAGGAGTTGGTTTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTGATCAATGGGAGTAAAATAAATTATTAGGAGTTGGTTTAATA  150

seq1  CTGTATCATTTTGTCATTATAATAGTAATATTATGACCTATAACTTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCATTTTGTCATTATAATAGTAATATTATGACCTATAACTTATTC  200

seq1  GACCATAGGTTCTTAATCTGATCATGGTGTTAGGTATTGGGTTCATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAGGTTCTTAATCTGATCATGGTGTTAGGTATTGGGTTCATTGTT  250

seq1  TGAGGGAGGAGTTACATATAACCCAAAAGTGATTGGTTACTCCCAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAGGAGTTACATATAACCCAAAAGTGATTGGTTACTCCCAAGATG  300

seq1  TCTACACTACTATGTACCAGTGGCCATGTACTGGCAGGCAAGTCATCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTACTATGTACCAGTGGCCATGTACTGGCAGGCAAGTCATCATG  350

seq1  AAACCCTGCAGAATCCACTTTTCCCTTAACTGTGAAAATGTGTCAGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGCAGAATCCACTTTTCCCTTAACTGTGAAAATGTGTCAGTAGG  400

seq1  AATAGAGCTTTCAGGTGTATACCAGTTTAATTTTGCCATGTTATATGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGCTTTCAGGTGTATACCAGTTTAATTTTGCCATGTTATATGACC  450

seq1  AGAGTATGTGCTGTCTTCAGTAACAGGGTCTTACTGCCACATTCTGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGTGCTGTCTTCAGTAACAGGGTCTTACTGCCACATTCTGGGAT  500

seq1  GATATCCAACCATACTGAAATTTCCTTGTGCGACTCAAGTTCTGTGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCAACCATACTGAAATTTCCTTGTGCGACTCAAGTTCTGTGAGAT  550

seq1  ATTATTGTCGAAAACCTTCAAACTAAGTAGTAATGCCTTTTTAAC-AAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTATTGTCGAAAACCTTCAAACTAAGTAGTAATGCCTTTTTAACAAAAA  600

seq1  TTGTGCGTGTCTGTGCATATATATATATATATATATATGATATATAGATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCGTGTCTGTGCATATATATATATATATATATATGATATATAGATC  650

seq1  TCTTTTATCTTTAAACCCATATAGTTGAATGAAATGTATTAGAAAATACA  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATC-TTAAACCCATATAGTTGAATGAAATGTATTAGAAAATACA  699

seq1  TTTTTGCTTTACATCATGAATCTTTAATTTGTTTTCAAATGATCAATTTC  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTTGCTTTACATCATGAATCTTTAATTTGTTTTC-AATGATCAATTTC  748

seq1  AGTATTTTATACAGCAAGCTTCTCTTTATAAATAAAAAGTGAACATGTTA  799
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTA-TTTATACAGCAAGCTTCTCTTTATAAATAAAAAGTGAACATG-TA  796

seq1  TTTAGAGAAAACTAGTTAACGTGGAGTTTCGTGTTAGGAAAGTAGTTTTA  849
      ||||||| ||||||||||||||||   ||||||||| |||||||| ||||
seq2  TTTAGAG-AAACTAGTTAACGTGGGAGTTCGTGTTA-GAAAGTAG-TTTA  843

seq1  GGTACGTTATTCTTGTAAAGTTACTTATTATCCTATACCTATATTACTTC  899
      || |||||| |||||| |||||   ||||||||||||||  |||||||||
seq2  GG-ACGTTA-TCTTGT-AAGTT--CTATTATCCTATACC--TATTACTTC  886

seq1  AGCTGAAGGGAAAGTGAAAATGGAAAATG  928
       |||| | ||||||| |||||||||||||
seq2  CGCTGGA-GGAAAGT-AAAATGGAAAATG  913