BAC Information

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BAC

Clone NameB6Ng01-065H21
Chromosome10 (Build37)
Map Location 79,032,425 - 79,033,092
singlet/doubletsinglet
Overlap genenone
Upstream geneIlvbl, Syde1, Olfr1357, LOC665890, Casp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330, GA_x5J8B7TPDN2-1058-1265, Olfr233-ps1, Olfr8, GA_x5J8B7TNKDU-1250-1574, Olfr1353, Olfr1352, Olfr1351, Olfr57, 2610008E11Rik, EG624765, AJ543404, LOC100041709, EG624845, EG625029, Ppap2c, Mier2
Downstream geneTheg, 4932409I22Rik, Shc2, Gm1157, Madcam1, Gtrgeo22, Cdc34, Gzmm, Bsg, Hcn2, Polrmt, Fgf22, Rnf126, Fstl3, Prssl1, Palm, 9130017N09Rik, Ptbp1, BC005764, Prtn3, Ela2, Cfd, Thrap5, C030046I01Rik, Kiss1r, Arid3a, Wdr18, Grin3b, ORF61, Cnn2, Abca7, Hmha1, Polr2e, Gpx4, Sbno2, Stk11, Dos, Atp5d, Midn, Cirbp, 1600002K03Rik, Efna2, Mum1, Ndufs7, Gamt, Dazap1, Rps15, Apc2, 2310011J03Rik, Pcsk4, Reep6, Adamtsl5, 6330514A18Rik, Rkhd1, Mbd3, Uqcr, Tcfe2a, Onecut3, Atp8b3, Rexo1, Klf16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H21.bB6Ng01-065H21.g
ACCDH884952DH884953
length668614
definitionDH884952|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H21, 5' end.DH884953|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaatgtcacacagtcaaagaaactgtagctggcaaaactctgc
ctctgctagagcatgagggaaatcacagtcagctgctgtggacagtctga
acagccccacatcctataccagggataaaatgaaagcatattctacttct
gtacttttttttttaaagaaacaaaattccagaattgtcacgacagctgg
gggcatggtcagggcggatcctcacctggactctcgcagtgaggggctag
gcatttggctttcaggggtgactattggtgtatgatgtgccaaatcctgg
taatccctgagtgcaggcctacatcatatctgatttaccaacactgttta
aacaacaaactctacagaaataatgaagtcggtgtctacaaaaatcttgt
ccaggttcataggaatggccatggacggccacaagtcatgtaaaacgcag
atgactatagctgacatgttctgtaagtacaaacatacaggactgcagag
acagtactatgtcaagaatgcaaatatctgtctctagctgcatatgtatc
aaaagatggcctagttagccatcactggaaagagaggcccattggacttg
caaactttatatgccccagttcaggggaacgccagggccaaaaaggggga
gtgggtgggtaggggatt
gaattcaacccatacctaaacataataagagtaatattcagcaaaccagt
agccaacatcaaactaaatggagagaaacttgaagcaatcccacaaaaat
cagggactagacaaggctgcccaccctgtccctacctattcaatatagta
ctcaaagtcctagccagagcaattaaacaacaaaaggagatcaaaggtat
acaaattggaagggaagaagtcaaaatatcactatttgcagattaaatga
tagtacaattaagtgatcccaaaaattccaccagagaacacctaaacttg
attagcaacttcagcaaaatgtatggatataaaattaattcaaacaaact
gtgagaactaaaggggtaggggaaagagggggaaaggagggtatctgaag
cccagccagagtttctcctatgctctgggcaggcagacacaggaggactg
ccaggcactttctactcagccacaggtgggcatctaagccacagaatcca
ctccacagggagtggacaagaggcagcccctgaccaggggccctggggca
acaccctgtagccccggggttatgggaaagagggcagaggggtgtggggg
aacaggggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_79032425_79033092
seq2: B6Ng01-065H21.b_48_715 (reverse)

seq1  AATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGAAC  50

seq1  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGG  100

seq1  CTAACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAGATATTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAGATATTTGCA  150

seq1  TTCTTGACATAGTACTGTCTCTGCAGTCCTGTATGTTTGTACTTACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGACATAGTACTGTCTCTGCAGTCCTGTATGTTTGTACTTACAGAA  200

seq1  CATGTCAGCTATAGTCATCTGCGTTTTACATGACTTGTGGCCGTCCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAGCTATAGTCATCTGCGTTTTACATGACTTGTGGCCGTCCATGG  250

seq1  CCATTCCTATGAACCTGGACAAGATTTTTGTAGACACCGACTTCATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTATGAACCTGGACAAGATTTTTGTAGACACCGACTTCATTATT  300

seq1  TCTGTAGAGTTTGTTGTTTAAACAGTGTTGGTAAATCAGATATGATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGAGTTTGTTGTTTAAACAGTGTTGGTAAATCAGATATGATGTAG  350

seq1  GCCTGCACTCAGGGATTACCAGGATTTGGCACATCATACACCAATAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACTCAGGGATTACCAGGATTTGGCACATCATACACCAATAGTCA  400

seq1  CCCCTGAAAGCCAAATGCCTAGCCCCTCACTGCGAGAGTCCAGGTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAAGCCAAATGCCTAGCCCCTCACTGCGAGAGTCCAGGTGAGGA  450

seq1  TCCGCCCTGACCATGCCCCCAGCTGTCGTGACAATTCTGGAATTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCCTGACCATGCCCCCAGCTGTCGTGACAATTCTGGAATTTTGTTT  500

seq1  CTTTAAAAAAAAAAGTACAGAAGTAGAATATGCTTTCATTTTATCCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAAAAAAAGTACAGAAGTAGAATATGCTTTCATTTTATCCCTGG  550

seq1  TATAGGATGTGGGGCTGTTCAGACTGTCCACAGCAGCTGACTGTGATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATGTGGGGCTGTTCAGACTGTCCACAGCAGCTGACTGTGATTTC  600

seq1  CCTCATGCTCTAGCAGAGGCAGAGTTTTGCCAGCTACAGTTTCTTTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGCTCTAGCAGAGGCAGAGTTTTGCCAGCTACAGTTTCTTTGACT  650

seq1  GTGTGACATTAGGAATTC  668
      ||||||||||||||||||
seq2  GTGTGACATTAGGAATTC  668