BAC Information

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BAC

Clone NameB6Ng01-065O01
Chromosome10 (Build37)
Map Location 98,591,121 - 98,722,449
singlet/doubletdoublet
Overlap geneWdr51b
Upstream geneEG667438, EG432494, Atp2b1, Galnt4
Downstream geneDusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065O01.bB6Ng01-065O01.g
ACCDH885224DH885225
length1,0621,021
definitionDH885224|Mus musculus domesticus DNA, BAC clone: B6Ng01-065O01, 5' end.DH885225|Mus musculus domesticus DNA, BAC clone: B6Ng01-065O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,591,121 - 98,592,179)(98,721,427 - 98,722,449)
sequence
gaattcttcttctttgaagtgaagaggagctggggtgttcacagagattt
taacttacttagcacagggtaacaggagagctgtccgaagaagagagtgc
actcacagtgggctaggtgagggcttctccagaggtaccagcccacatct
acattttaaaagactttgctcagcacgcctttaatcccagcacttgggag
gcagaggcaggaggatttctgagttcgaggccagcctggtctacagagtg
agttccaggacagccagagctatacagagaaaccctgcctcgaaaaaaaa
aaaaaagaaagaaaagaaaagaaaagaaaagaaaagatttttgctcacgt
acaatgctcacattgtcttctccattgctctgttatcttttcttccccag
tcaacaaaataacatggacatgtaacttgaaagcacctttgttttgttca
tgagtgtaagattacagccatggggttagcaaggccacaggtgtacactg
ggcctcagtaattggtgctggtcggtagaggctcaaggagtagggaaagg
gagattctcaggagacgttctgtataaaaaagcgtagcacagaaaatacc
ttctcccagcccagactggtagctcacacaactccaagtggctctggttc
aaaactttgccttggggttctcagttttaatcaaccttgctcctctgaat
ggaaacttctttaaactacagattgctgcttctaaagcaacacaaagtac
agtgttagctgccggttcaaaatccacttttcccagcgtctatgcagctg
tgcatgggtagggcagggcaagcaaccccgtgcaggcaagggtcagctgt
gatttccatgaaccatagccagcacatcccatggccttcacaaaacttct
taagggttttgaatgcagtaagctgtttaagtttctactactgcgtggtg
gactgaatataaattaactaatttatcactgttaaactgtgtttccagga
tagggaaagtcttcataatttaaagcacacacagccccagttcgagtgtg
gactttttccgc
gaattcaaaccttacctgtatgactcaccaatatggaggcagccctgggc
ctcacttcacttcttcactcacttcatttcttctctcactccacgtttta
gggaagtagtaggaatgaaatccgtatgacaagccggtaaagtactggct
tttcttgtaagtatgaggactcaagtttgatccccagaacccatgttgtt
ttgtttgtttgtttgtttgttgtttttaaataatataattgaagccgggc
agtagtggcgcatgcctttaatcccagcacttgggcggcagaggcaggca
gatttctgagttcgaagccagcctggtctacagagtgagttccaggacag
ccagggctacacagagaaaccctgtctcaaaaaaaaacccaacccattat
ctatctatctatctatctatctatctatctatctatctatctatacatta
ataataataataataataaattgaaaataaaccaatgcttgcaacactag
cactaaggaagtagtgataggaagatcacaggcgctcactagccagccaa
ccccgtctagttggtaagagaccctgtctcaaaaatcaaggtgcgcatga
gtcctgaggagcaacatctgagattgtctttctggctccaaagcacactg
gtgacctcacactcatatatgaaaatacatacaaaaataggttttttcat
tcttgttttttgtttttttttaaactaaagattgcttcccttccttgagc
gcaccttcccatcagtccagaaatacatcagtgatgtatggtgcgagata
gtagaagtgctgtgtggaaagcttagcaagatggggaattcattaacgtg
taaagttgggaaatatatgtattttgcttaaggacatttagggattatga
atagtttctcaaatgaatatggagatagagacacttagaaatgtaggata
caaagaaagttgacttctcccctctgctcacccacccatcccacccaacc
tcacccgtgttactgtagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98591121_98592179
seq2: B6Ng01-065O01.b_45_1106

seq1  GAATTCTTCTTCTTTGAAGTGAAGAGGAGCTGGGGTGTTCACAGAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCTTTGAAGTGAAGAGGAGCTGGGGTGTTCACAGAGATTT  50

seq1  TAACTTACTTAGCACAGGGTAACAGGAGAGCTGTCCGAAGAAGAGAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTACTTAGCACAGGGTAACAGGAGAGCTGTCCGAAGAAGAGAGTGC  100

seq1  ACTCACAGTGGGCTAGGTGAGGGCTTCTCCAGAGGTACCAGCCCACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGTGGGCTAGGTGAGGGCTTCTCCAGAGGTACCAGCCCACATCT  150

seq1  ACATTTTAAAAGACTTTGCTCAGCACGCCTTTAATCCCAGCACTTGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAAAGACTTTGCTCAGCACGCCTTTAATCCCAGCACTTGGGAG  200

seq1  GCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTG  250

seq1  AGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGCCTCGAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGCCTCGAAAAAAAA  300

seq1  AAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGATTTTTGCTCACGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGATTTTTGCTCACGT  350

seq1  ACAATGCTCACATTGTCTTCTCCATTGCTCTGTTATCTTTTCTTCCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCACATTGTCTTCTCCATTGCTCTGTTATCTTTTCTTCCCCAG  400

seq1  TCAACAAAATAACATGGACATGTAACTTGAAAGCACCTTTGTTTTGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAAATAACATGGACATGTAACTTGAAAGCACCTTTGTTTTGTTCA  450

seq1  TGAGTGTAAGATTACAGCCATGGGGTTAGCAAGGCCACAGGTGTACACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTAAGATTACAGCCATGGGGTTAGCAAGGCCACAGGTGTACACTG  500

seq1  GGCCTCAGTAATTGGTGCTGGTCGGTAGAGGCTCAAGGAGTAGGGAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGTAATTGGTGCTGGTCGGTAGAGGCTCAAGGAGTAGGGAAAGG  550

seq1  GAGATTCTCAGGAGACGTTCTGTATAAAAAAGCGTAGCACAGAAAATACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTCAGGAGACGTTCTGTATAAAAAAGCGTAGCACAGAAAATACC  600

seq1  TTCTCCCAGCCCAGACTGGTAGCTCACACAACTCCAAGTGGCTCTGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAGCCCAGACTGGTAGCTCACACAACTCCAAGTGGCTCTGGTTC  650

seq1  AAAACTTTGCCTTGGGGTTCTCAGTTTTAATCAACCTTGCTCCTCTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTGCCTTGGGGTTCTCAGTTTTAATCAACCTTGCTCCTCTGAAT  700

seq1  GGAAACTTCTTTAAACTACAGATTGCTGCTTCTAAAGCAACACAAAGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTCTTTAAACTACAGATTGCTGCTTCTAAAGCAACACAAAGTAC  750

seq1  AGTG-TAGCTGCCGGTTCAAAATCCACTTTTCCCAGCGTCTATGCAGCTG  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGCTGCCGGTTCAAAATCCACTTTTCCCAGCGTCTATGCAGCTG  800

seq1  TGCATGGTAGGGGCAGGGCAAGCAACCCCGTGCAGGCAAGGGTCAGCTGT  849
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGTAGGGCAGGGCAAGCAACCCCGTGCAGGCAAGGGTCAGCTGT  850

seq1  GATTTCCATGAACCA-AGCCAGCACACCACATGGCCTTCACATACTTTCT  898
      ||||||||||||||| |||||||||| | ||||||||||||| |  ||||
seq2  GATTTCCATGAACCATAGCCAGCACATCCCATGGCCTTCACAAAACTTCT  900

seq1  TAAGGTTTTTGTATGCAGTAAGCTGTTTAAGTTTCTACTACTGCGTGGT-  947
      ||||| ||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TAAGGGTTTTGAATGCAGTAAGCTGTTTAAGTTTCTACTACTGCGTGGTG  950

seq1  GACTGAATATTAAATTAACTAATTTATCACTGTTAAACTGTGTTTCCAGG  997
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATA-TAAATTAACTAATTTATCACTGTTAAACTGTGTTTCCAGG  999

seq1  AAAGGG-AAGTCTTCAGAATTTAAAGCACACACAGCCCCAGTTCGGAGTG  1046
      | |||| ||||||||| ||||||||||||||||||||||||||| |||||
seq2  ATAGGGAAAGTCTTCATAATTTAAAGCACACACAGCCCCAGTTC-GAGTG  1048

seq1  TGGAC-TTTTCCGC  1059
      ||||| ||||||||
seq2  TGGACTTTTTCCGC  1062

seq1: chr10_98721427_98722449
seq2: B6Ng01-065O01.g_71_1091 (reverse)

seq1  GATCTCCAGTAACACGGGTGGGGGTGGGGTGGGGTGGGGTGGGGTGGAGC  50
      ||||| ||||||||||||| | ||| ||||||| | |||||||   ||||
seq2  GATCTACAGTAACACGGGT-GAGGTTGGGTGGGAT-GGGTGGG--TGAGC  46

seq1  AGAGGGGGAGAAGTC-ACTTTCTTTGTATCCTACATTTCTAAGTTGTCTC  99
      ||| ||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  AGA-GGGGAGAAGTCAACTTTCTTTGTATCCTACATTTCTAAG-TGTCTC  94

seq1  TTATCTCCATATTCATTTGAGAAACTATTCAT-ATTCCTAAATGTCCTTT  148
       ||||||||||||||||||||||||||||||| || ||||||||||| ||
seq2  -TATCTCCATATTCATTTGAGAAACTATTCATAATCCCTAAATGTCC-TT  142

seq1  AAGC-AAATACATATA-TTCCCAACTTTACACGTTTATGGATTCCCCTTC  196
      |||| ||||||||||| |||||||||||||||||| ||| ||||||| ||
seq2  AAGCAAAATACATATATTTCCCAACTTTACACGTTAATGAATTCCCCATC  192

seq1  TTGCTTAGCTTTCCACACAGCACTTCTACTTTCTCGCACCATACATCACT  246
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGCTAAGCTTTCCACACAGCACTTCTACTATCTCGCACCATACATCACT  242

seq1  GTTGTATTTCTGGACTGATGGGAAGGTGCGCTCAAGGAAGGGAAGCAATC  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATTTCTGGACTGATGGGAAGGTGCGCTCAAGGAAGGGAAGCAATC  292

seq1  TTTAGTTTAAAAAAAAACAAAAAACAAGAATG-AAAAACCTATTTTTGTA  345
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTAGTTTAAAAAAAAACAAAAAACAAGAATGAAAAAACCTATTTTTGTA  342

seq1  TGTATTTTCATATATGAGTGTGAGGTCACCAGTGTGCTTTGGAGCCAG-A  394
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTATTTTCATATATGAGTGTGAGGTCACCAGTGTGCTTTGGAGCCAGAA  392

seq1  AGACAATCTCAGATGTTGCTCCTCAGGACTCATGCGCACCTTGATTTTTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCTCAGATGTTGCTCCTCAGGACTCATGCGCACCTTGATTTTTG  442

seq1  AGACAGGGTCTCTTACCAACTAGACGGGGTTGGCTGGCTAGTGAGCGCCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTCTCTTACCAACTAGACGGGGTTGGCTGGCTAGTGAGCGCCT  492

seq1  GTGATCTTCCTATCACTACTTCCTTAGTGCTAGTGTTGCAAGCATTGGTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTTCCTATCACTACTTCCTTAGTGCTAGTGTTGCAAGCATTGGTT  542

seq1  TATTTTCAATTTATTATTATTATTATTATTAATGTATAGATAGATAGATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAATTTATTATTATTATTATTATTAATGTATAGATAGATAGATA  592

seq1  GATAGATAGATAGATAGATAGATAGATAGATAATGGGTTGGGTTTTTTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATAGATAGATAGATAATGGGTTGGGTTTTTTTT  642

seq1  TGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGT  692

seq1  AGACCAGGCTGGCTTCGAACTCAGAAATCTGCCTGCCTCTGCCGCCCAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCTTCGAACTCAGAAATCTGCCTGCCTCTGCCGCCCAAG  742

seq1  TGCTGGGATTAAAGGCATGCGCCACTACTGCCCGGCTTCAATTATATTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCATGCGCCACTACTGCCCGGCTTCAATTATATTAT  792

seq1  TTAAAAACAACAAACAAACAAACAAACAAAACAACATGGGTTCTGGGGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACAACAAACAAACAAACAAACAAAACAACATGGGTTCTGGGGAT  842

seq1  CAAACTTGAGTCCTCATACTTACAAGAAAAGCCAGTACTTTACCGGCTTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGAGTCCTCATACTTACAAGAAAAGCCAGTACTTTACCGGCTTG  892

seq1  TCATACGGATTTCATTCCTACTACTTCCCTAAAACGTGGAGTGAGAGAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACGGATTTCATTCCTACTACTTCCCTAAAACGTGGAGTGAGAGAAG  942

seq1  AAATGAAGTGAGTGAAGAAGTGAAGTGAGGCCCAGGGCTGCCTCCATATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTGAGTGAAGAAGTGAAGTGAGGCCCAGGGCTGCCTCCATATT  992

seq1  GGTGAGTCATACAGGTAAGGTTTGAATTC  1023
      |||||||||||||||||||||||||||||
seq2  GGTGAGTCATACAGGTAAGGTTTGAATTC  1021