BAC Information

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BAC

Clone NameB6Ng01-066G07
Chromosome10 (Build37)
Map Location 101,482,856 - 101,519,838
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066G07.bB6Ng01-066G07.g
ACCDH885585DH885586
length1,0801,111
definitionDH885585|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G07, 5' end.DH885586|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,482,856 - 101,483,952)(101,518,711 - 101,519,838)
sequence
gaattcttgtttcaaatgatcattttattcagatatgtgtgctgataaca
ttttacctattgtacatccatctccctactccatacaactcactgtatag
gtgataagtcccagcctttgacagtgacaggaaagattagcaagaatttt
gactttgataaatcagatatattaaaactttgctgcagggatgcactcct
caaaagctggtttagcactgtaaacacggtcctccttgttgtttgctttc
tataaacctgtaacacagtaggtattccaattaaatgaagtgcatgttca
tgtacacttcagactattttacattatcctgctggattatgatgccttaa
agaaaagactatccaaatgattgtggtagaaggaaatatgagtctttttt
ttttctttcttggaacagattttattatcaacacagtcctttcgcgattt
catagacctgttatgtattcccacccctctctgccacactctcctctact
ggtcctccccttccattctcctgtgctccataaaaatctattttccttca
ttacaagttttggatagtttagtcttccagacccacttatgatacttttc
aagctataagctatcaaggtcataaaagtaaatttttaaaggtttaattt
tggttcaatccaaagctgtttgtcagtcagttgagtgaggtaactcagca
ctttgacaaacagggttattggtcttttacgatttttctgctacaccaat
ttactgattgtcaaggtcaaaagagacatgttttcaaaatatattattat
tgatattctttttgaaactctatgagcatattgggaaataaactgatgct
ctctttcgatctttagcggccaagacagctatctagaacttctcagtgta
ctaatgtgtttgacataagcattgtctgacaactgaaaaatataaaatct
gtaattcaccctatattcatgttactaaagggtaggataagacatttgaa
taagaatgtggatgcccagaaaattttcctaggtatgagtgtctatacat
caaagtcattctatgtatctacttcttatt
gaattcaaaaacatcaaggctgtcacagcacacagctccccaggcaacac
tgacctgcctactttgttctctttctgctttctccttcttcctgaaaaga
tttttttctactaaagtgtctttgtttgcaaagcctctgtctaccccata
ggctaaattgatgagtcccctggtcatagtcattttttttttcttgaata
aaatctcttacttgcagttttcccatttgagtgcaaatatttaaaaccaa
acattgtgttttatttcccttttaattccttaatatttggttcaactact
ggctaatgtctgaccatgttgacagtatatttctaagtgaaatagataat
gaatttatggataaatgaaaacagacacagaaaagaaatgaaggcaaacc
atagaatacacatttgaaatgagaatttttaaataatatgtctgtttttg
aatatcggatgtttgcatttggtctcttaaaagttaattaaaagggtttt
ttttttaaatcaggtccattagatttttagtacacatgtatctcaaaata
taccatttagaaataaaatgttacatacagtaactttattatcaaagtta
tacaaaacatcaataggattttaatcagagtattgtgtgtttacatagct
aactcttgtgccttttgaattctgaatatatgtgtatgtgttttattagt
tttaataagacatcaaaacactccagggtccatttgactattgcatttat
tcatgcctagggtgcactatgcgcttacaaaccaaaggctaagtgcttta
actacccaaattatgtattagtggatcaataaaacatacccgggagtaac
gtaatcctataatatgtctcctacttcttattaaaaggggaaaagtatta
atcttgaaagaaagcttatatttcagataatgtcaggtttctcctccata
tctcatgcaggcataaaagaaagggtgttcctttcttgtaggagtggtgt
gcagaattgatgaattatgctgttcaccaatttcataattcttcttacaa
ttttcgaaggaagatagcttaggccataaatgttgatgaaataggtagta
tcttctgccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101482856_101483952
seq2: B6Ng01-066G07.b_46_1125

seq1  GAATTCTTGTTTCAAATGATCATTTTATTCAGATATGTGTGCTGATAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTCAAATGATCATTTTATTCAGATATGTGTGCTGATAACA  50

seq1  TTTTACCTATTGTACATCCATCTCCCTACTCCATACAACTCACTGTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTATTGTACATCCATCTCCCTACTCCATACAACTCACTGTATAG  100

seq1  GTGATAAGTCCCAGCCTTTGACAGTGACAGGAAAGATTAGCAAGAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGTCCCAGCCTTTGACAGTGACAGGAAAGATTAGCAAGAATTTT  150

seq1  GACTTTGATAAATCAGATATATTAAAACTTTGCTGCAGGGATGCACTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGATAAATCAGATATATTAAAACTTTGCTGCAGGGATGCACTCCT  200

seq1  CAAAAGCTGGTTTAGCACTGTAAACACGGTCCTCCTTGTTGTTTGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTGGTTTAGCACTGTAAACACGGTCCTCCTTGTTGTTTGCTTTC  250

seq1  TATAAACCTGTAACACAGTAGGTATTCCAATTAAATGAAGTGCATGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCTGTAACACAGTAGGTATTCCAATTAAATGAAGTGCATGTTCA  300

seq1  TGTACACTTCAGACTATTTTACATTATCCTGCTGGATTATGATGCCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACTTCAGACTATTTTACATTATCCTGCTGGATTATGATGCCTTAA  350

seq1  AGAAAAGACTATCCAAATGATTGTGGTAGAAGGAAATATGAGTCTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACTATCCAAATGATTGTGGTAGAAGGAAATATGAGTCTTTTTT  400

seq1  TTTTCTTTCTTGGAACAGATTTTATTATCAACACAGTCCTTTCGCGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTGGAACAGATTTTATTATCAACACAGTCCTTTCGCGATTT  450

seq1  CATAGACCTGTTATGTATTCCCACCCCTCTCTGCCACACTCTCCTCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACCTGTTATGTATTCCCACCCCTCTCTGCCACACTCTCCTCTACT  500

seq1  GGTCCTCCCCTTCCATTCTCCTGTGCTCCATAAAAATCTATTTTCCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCCCCTTCCATTCTCCTGTGCTCCATAAAAATCTATTTTCCTTCA  550

seq1  TTACAAGTTTTGGATAGTTTAGTCTTCCAGACCCACTTATGATACTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTTTTGGATAGTTTAGTCTTCCAGACCCACTTATGATACTTTTC  600

seq1  AAGCTATAAGCTATCAAGGTCATAAAAGTAAATTTTTAAAGGTTTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAAGCTATCAAGGTCATAAAAGTAAATTTTTAAAGGTTTAATTT  650

seq1  TGGTTCAATCCAAAGCTGTTTGTCAGTCAGTTGAGTGAGGTAACTCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAATCCAAAGCTGTTTGTCAGTCAGTTGAGTGAGGTAACTCAGCA  700

seq1  CTTTGACAAACAGGGTTATTGGTCTTTTACGATTTTTCTGCTACACCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACAAACAGGGTTATTGGTCTTTTACGATTTTTCTGCTACACCAAT  750

seq1  TTACTGATTGTCAAGGTCAAAAGAGACATGTTTTCAAAATATATTATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATTGTCAAGGTCAAAAGAGACATGTTTTCAAAATATATTATTAT  800

seq1  TGATATTCTTTTTGAAACTCTATGAGCATATTGGGAAATAAACTGATGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCTTTTTGAAACTCTATGAGCATATTGGGAAATAAACTGATGCT  850

seq1  CTCTTTCGATCTTTAGCGGCCAAGACAGCTATCTAGAACTTCTCAGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCGATCTTTAGCGGCCAAGACAGCTATCTAGAACTTCTCAGTGTA  900

seq1  CTAAGGTGTTTGACATAAGCATTGTCTGACAACTGAAAAATAATAAAATC  950
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTAATGTGTTTGACATAAGCATTGTCTGACAACTGAAAAAT-ATAAAATC  949

seq1  TGTAATTCACCCTATATTCATGTTAACTAAAGGGTAGGATAAGACATTTG  1000
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTAATTCACCCTATATTCATGTT-ACTAAAGGGTAGGATAAGACATTTG  998

seq1  AATAAGAAATGGTGGAATGCCCAAGAAAATTTTTCCTAGGGTAATGAGTG  1050
      ||||||||   |||| |||||| |||||| ||||||||||   |||||||
seq2  AATAAGAA--TGTGG-ATGCCC-AGAAAA-TTTTCCTAGG--TATGAGTG  1041

seq1  TCCTTAATTACATTCAAAAGTCATTCTATGTTATTCTACTTCTTATT  1097
      ||  ||  |||||   |||||||||||||||   |||||||||||||
seq2  TC--TA--TACAT--CAAAGTCATTCTATGT--ATCTACTTCTTATT  1080

seq1: chr10_101518711_101519838
seq2: B6Ng01-066G07.g_66_1176 (reverse)

seq1  ATGGCATAAAGATACCATACCTATTTCTATCAACATTTTATGGGCCTAAG  50
      ||||||  |||||||  |||||||||| ||||||| ||||| ||||||||
seq2  ATGGCA-GAAGATAC--TACCTATTTC-ATCAACA-TTTAT-GGCCTAAG  44

seq1  CTATCTTTCTGTCGAATATTTGTAAAGAAGAATTAATTGAAATTGGTGTA  100
      ||||||| || ||||| | |||| |||||||||||  ||||||||||| |
seq2  CTATCTTCCT-TCGAA-AATTGT-AAGAAGAATTA--TGAAATTGGTGAA  89

seq1  CAGCATAATTCATCAATTCTGCACACCATCTCCTACAAGAAAGGAACACC  150
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CAGCATAATTCATCAATTCTGCACACCA-CTCCTACAAGAAAGGAACA-C  137

seq1  CCTTTCTTTTATGCCCTGCATGAGATATGGAGGAGAAACCTGACATTATT  200
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  CCTTTCTTTTATG-CCTGCATGAGATATGGAGGAGAAACCTGACATTA-T  185

seq1  CTGAAATATTAGCTTTCTTTCAAGATTAATTACTTTTTCCCCTTTTAATA  250
      ||||||||| ||||||||||||||||||| ||| ||||||||||||||||
seq2  CTGAAATATAAGCTTTCTTTCAAGATTAA-TAC-TTTTCCCCTTTTAATA  233

seq1  AGAAGTAGGAGACATATTATAGGATTACGTTACTCCCGGGTATGTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGGAGACATATTATAGGATTACGTTACTCCCGGGTATGTTTTAT  283

seq1  TGATCCACTAATACATAATTTGGGTAGTTAAAGCACTTAGCCTTTGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACTAATACATAATTTGGGTAGTTAAAGCACTTAGCCTTTGGTTT  333

seq1  GTAAGCGCATAGTGCACCCTAGGCATGAATAAATGCAATAGTCAAATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCGCATAGTGCACCCTAGGCATGAATAAATGCAATAGTCAAATGGA  383

seq1  CCCTGGAGTGTTTTGATGTCTTATTAAAACTAATAAAACACATACACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGTGTTTTGATGTCTTATTAAAACTAATAAAACACATACACATA  433

seq1  TATTCAGAATTCAAAAGGCACAAGAGTTAGCTATGTAAACACACAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAATTCAAAAGGCACAAGAGTTAGCTATGTAAACACACAATACT  483

seq1  CTGATTAAAATCCTATTGATGTTTTGTATAACTTTGATAATAAAGTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTAAAATCCTATTGATGTTTTGTATAACTTTGATAATAAAGTTACT  533

seq1  GTATGTAACATTTTATTTCTAAATGGTATATTTTGAGATACATGTGTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAACATTTTATTTCTAAATGGTATATTTTGAGATACATGTGTACT  583

seq1  AAAAATCTAATGGACCTGATTTAAAAAAAAAACCCTTTTAATTAACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTAATGGACCTGATTTAAAAAAAAAACCCTTTTAATTAACTTTT  633

seq1  AAGAGACCAAATGCAAACATCCGATATTCAAAAACAGACATATTATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACCAAATGCAAACATCCGATATTCAAAAACAGACATATTATTTAA  683

seq1  AAATTCTCATTTCAAATGTGTATTCTATGGTTTGCCTTCATTTCTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCATTTCAAATGTGTATTCTATGGTTTGCCTTCATTTCTTTTCT  733

seq1  GTGTCTGTTTTCATTTATCCATAAATTCATTATCTATTTCACTTAGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTTTTCATTTATCCATAAATTCATTATCTATTTCACTTAGAAAT  783

seq1  ATACTGTCAACATGGTCAGACATTAGCCAGTAGTTGAACCAAATATTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCAACATGGTCAGACATTAGCCAGTAGTTGAACCAAATATTAAG  833

seq1  GAATTAAAAGGGAAATAAAACACAATGTTTGGTTTTAAATATTTGCACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAAGGGAAATAAAACACAATGTTTGGTTTTAAATATTTGCACTC  883

seq1  AAATGGGAAAACTGCAAGTAAGAGATTTTATTCAAGAAAAAAAAAATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAAAACTGCAAGTAAGAGATTTTATTCAAGAAAAAAAAAATGAC  933

seq1  TATGACCAGGGGACTCATCAATTTAGCCTATGGGGTAGACAGAGGCTTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCAGGGGACTCATCAATTTAGCCTATGGGGTAGACAGAGGCTTTG  983

seq1  CAAACAAAGACACTTTAGTAGAAAAAAATCTTTTCAGGAAGAAGGAGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGACACTTTAGTAGAAAAAAATCTTTTCAGGAAGAAGGAGAAA  1033

seq1  GCAGAAAGAGAACAAAGTAGGCAGGTCAGTGTTGCCTGGGGAGCTGTGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGAGAACAAAGTAGGCAGGTCAGTGTTGCCTGGGGAGCTGTGTG  1083

seq1  CTGTGACAGCCTTGATGTTTTTGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  CTGTGACAGCCTTGATGTTTTTGAATTC  1111