BAC Information

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BAC

Clone NameB6Ng01-066P06
Chromosome10 (Build37)
Map Location 13,229,099 - 13,229,746
singlet/doubletsinglet
Overlap geneFuca2
Upstream geneUtrn, LOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475
Downstream genePex3, Deadc1, Aig1, EG666859, Hivep2, Gpr126
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P06.bB6Ng01-066P06.g
ACCDH885987DH885988
length1,0291,130
definitionDH885987|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P06, 5' end.DH885988|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatctctagaattcacttggttcaggtttccatgccacccgc
ctgtacctgatctttccagcctctcatttttcagtgtccagcttaattct
ccacctgaaatttggcgattttttaacctgcctttcttctatattcacaa
ctgtcttagatagggtttatattgttgtgaagagacactaggaacatggc
aattcttataaaggaaaaacatttaactggggctggcttacagttcagag
gtttagtccattatcatcaaggcgggaagcatagtggcatgcagtcagac
atggtgctggagaggtactgagagttctacatccggcttggcaggcagca
ggaggaaagagactctgggcctggcttgagcttttgaaacccagtgacac
actttcttcaacaaggccacacctcctaagagtaccaccacattccactc
cctggccaccactggcttgttgccatctaagcatgtaaaattgcagtcag
tctaacttcagaagtccccatacacactctatcaaagtctcaactcggtt
tcaaagtctcttctgagactcatggcaatcaaactataatcccctataat
aagtttgaaataaaaaagatcacatagttacaacaatagatggtgcagta
tttacattaccattccagatggaaggaaagggaccatagtgagaaaatac
ttggccaaagcaagaccaaaagccagcagggcaaactccgaactgcatct
ccatgtctgatacccaggcactcttccaatctccgattcttttcagcttt
gatgactgcatcacacttctttctcttggctgtccctaacctgtgttggc
agcttttctccacaactctagcgtttccaacatcgcggggtctctaaggc
ttcaccttcacagctacacacgatggcttctctgggcctccatgcaggga
cccccgcccacatgcctggccccagcagcttgccttaaccacaaagggag
attccataacctccttttgcatcttgact
gaattcaatataatctaatttaaaaagataaatggttaaaaaaaaaccta
aatactaacaaaatgaaataaaattaagccacaaagaaataaagacattt
ttttcgatattacagctaaagaatataatgactgaaatgacaaacgtttt
aaatgaacttcaaaagaaagaaaactcaaccaataacagtatacctagac
aaactgtgtttcataaatggagaagagattaagagtctgccctcatagag
aaagcaaagaaagactgaaaagtccattgctaggaatggacttttattgc
taggaatcaagctttacaaagaataaaaattgtcaccaatttgaaacaaa
ccatggtcagtaacatgacagaaagcaaatatcactaaagtcaaagagta
aatgtgttgagaagatgacacagaatccattactggatactcatagagaa
ggcaagagtctggtgtcagtgacttaaaggatggttgaagtgggaatttc
tggtttcgttggttggaggctcagttctcatgtgatgtttttctggaaac
tgccttataagaggatgttttgctgggaacagatacatggtgttcttctg
gaaactatgtggtgaaagggcatgtgatgttttgcttgagagggtacatg
atgtttggaaagagtgtaagtgtaattcaacagacagtggacaactctct
gacattggttcaccttgctggtctttgttgggcttcgctgacgatgctct
tcactaaaaaatctcttgcattggttcgccttgctttcttctctgatctt
cacttggagtgacttcatagagagaatgcaccaaagaacatctggtagtg
ttccagctgctttcttgccactttggtggacttgtgctgatcagcagagc
cctgtggtttcttttagctgctgctgctgattcattttggtgttagctag
aagactggatggcagacagcaagatggaatcacctcagaacacttcttaa
caggcccattccccttgttcttcagcgtttctcccctatctttggtggtg
ggctatatggaggttgagcattagaccctattaaggatgtttctaaattc
atgccacaatgggagagtcctatttctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_13229099_13229746
seq2: B6Ng01-066P06.b_44_691

seq1  GAATTCTTTATCTCTAGAATTCACTTGGTTCAGGTTTCCATGCCACCCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCTCTAGAATTCACTTGGTTCAGGTTTCCATGCCACCCGC  50

seq1  CTGTACCTGATCTTTCCAGCCTCTCATTTTTCAGTGTCCAGCTTAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCTGATCTTTCCAGCCTCTCATTTTTCAGTGTCCAGCTTAATTCT  100

seq1  CCACCTGAAATTTGGCGATTTTTTAACCTGCCTTTCTTCTATATTCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGAAATTTGGCGATTTTTTAACCTGCCTTTCTTCTATATTCACAA  150

seq1  CTGTCTTAGATAGGGTTTATATTGTTGTGAAGAGACACTAGGAACATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGATAGGGTTTATATTGTTGTGAAGAGACACTAGGAACATGGC  200

seq1  AATTCTTATAAAGGAAAAACATTTAACTGGGGCTGGCTTACAGTTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTATAAAGGAAAAACATTTAACTGGGGCTGGCTTACAGTTCAGAG  250

seq1  GTTTAGTCCATTATCATCAAGGCGGGAAGCATAGTGGCATGCAGTCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTCCATTATCATCAAGGCGGGAAGCATAGTGGCATGCAGTCAGAC  300

seq1  ATGGTGCTGGAGAGGTACTGAGAGTTCTACATCCGGCTTGGCAGGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGGAGAGGTACTGAGAGTTCTACATCCGGCTTGGCAGGCAGCA  350

seq1  GGAGGAAAGAGACTCTGGGCCTGGCTTGAGCTTTTGAAACCCAGTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAGAGACTCTGGGCCTGGCTTGAGCTTTTGAAACCCAGTGACAC  400

seq1  ACTTTCTTCAACAAGGCCACACCTCCTAAGAGTACCACCACATTCCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTCAACAAGGCCACACCTCCTAAGAGTACCACCACATTCCACTC  450

seq1  CCTGGCCACCACTGGCTTGTTGCCATCTAAGCATGTAAAATTGCAGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCACCACTGGCTTGTTGCCATCTAAGCATGTAAAATTGCAGTCAG  500

seq1  TCTAACTTCAGAAGTCCCCATACACACTCTATCAAAGTCTCAACTCGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTTCAGAAGTCCCCATACACACTCTATCAAAGTCTCAACTCGGTT  550

seq1  TCAAAGTCTCTTCTGAGACTCATGGCAATCAAACTATAATCCCCTATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCTCTTCTGAGACTCATGGCAATCAAACTATAATCCCCTATAAT  600

seq1  AAGTTTGAAATAAAAAAGATCACATAGTTACAACAATAGATGGTGCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGAAATAAAAAAGATCACATAGTTACAACAATAGATGGTGCAG  648