BAC Information

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BAC

Clone NameB6Ng01-067D19
Chromosome10 (Build37)3 (Build37)
Map Location 104,054,497 - 104,054,86545,620,633 - 45,621,620
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067D19.bB6Ng01-067D19.g
ACCDH886190DH886191
length1,117984
definitionDH886190|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D19, 5' end.DH886191|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,497 - 104,054,865)(45,620,633 - 45,621,620)
sequence
gaattcagaaaaaaatttctgaatatttacttatattctttccatgcata
tccgttcataaggtcttaataacagttgtagttatatttaataaatagta
taagatatttaccatcagaattcacttgtactagtaaaggctgtggtata
ttggtaataatcaaataggctgtaagtattcgtgtaggtactttttaaat
gacatatttctttttttcttttttttaactgttattgggtatttatttca
tttacatttccaatgctatcccaaaagtctcccacacccactcccccaca
cactcacacacacctcttggcactggcgttcccctgtattgaggtatata
aagtctgcacgaccaatgggcctctctttccactgatggccgaccaggcc
atcttctgatacatatgcagctagagacacgagctccagggagtaatagt
tcatactgttgttccacctatagggttgcagatccccacagctccctggg
tacttcctccagctcttccattgggggccctatgatccatccaatagctg
actgtgagcatcaacttctctttttgctaggccccgcattctcacatgag
acagctatatcagggtcctttcagcaaaatcttgctagtgtatgcaacgg
tgtcagcatttggaggatgattataggatgtatctctgggtaaggcagcc
tctagatgatccattctttcgactcagctccaaactctgtctctgaaggt
ccttccatgggtgccttgcttatggtcacttgatctttgacaagggagct
aaaactatccagtggagaaaagacagcacttcaacaaatggtgctggcac
aactggcggttatcatgtagaagaatgtgaattgatccattcctatctcc
ttgtactaaggtcaaatctaagtggattaaggaactccacgtaaaccaga
gacactgaaacttacagaggagaaagtggggaaagcctcgagatatgggc
acaggggaaaattcctgacaaacacatggctgtctatagatcgaaatcga
taatggacctcataaaattgcaaagcttctgcaagcaaagaacctgtcat
agacaaagaccaccaac
gaattcagtatgttgtatttgtatggttgtatacatgtcacaataataaa
ggaaaacaatagaaataatacttcaatatattaaaatactctaaagtaaa
aaggtaattttctttattatttctgatctaacaattgtattcttctacaa
tttaatgctataaggtattgtgatgagcataattaatatcttttagtgta
acttttagtatataatagcatgaattacgcattatattgtatatcatata
ttatattatacattttatattatgtattattatcttataccatataatat
gtatcatattttacatattatatactttgtcatatgtttatgatatatta
tacatcatattatattatatataatatattgtatttcatatattatatat
tttatactatatatggtaaaacgttcacatatatgtatatatatacatag
atttctagtttttttttaataccagtcattccatgtaatcctctatgtaa
ggtctctgaaagcaccaggacctgcagagtaataattcatatggcacaag
atgaaaccctgcccaataagacttattagccagtgttaatttaaatgtca
agagtctgacacaagaaaatttatttttggtctacttacaaacagtacaa
atttggaaaaaagtttcatggttacaattaccttaatcctgtgtacatga
taaagcttaaggaattgactattttgaaattacttgcaaattacatgtgg
cctcttccataaagattgattctatagattgtatgagcccaggcaaacta
ggtattatttaaccctacagatagcacaggtgtcaaaattctataagctc
ccctcatttccagtctctaggtgaaagacagattatatatttcttgttaa
agagacaaccctatttgtgtacattcctggtttccctagtgctttctgtg
aggtagagactttgtactctcacattctcaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054497_104054865
seq2: B6Ng01-067D19.b_817_1163 (reverse)

seq1  GTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCT  50
      ||||||||||  |||||||   |||| |  |||||   ||||||||||||
seq2  GTTGGTGGTC--TTTGTCT--ATGACAGGTTCTTT--GCTTGCAGAAGCT  44

seq1  TTGCAATTTTATGAGGTCCCATTTATCAACTCTCTATCTTACAGCACAAG  100
      |||||||||||||||||||   ||||| | | || ||| || || || ||
seq2  TTGCAATTTTATGAGGTCC--ATTATCGA-TTTCGATC-TATAG-AC-AG  88

seq1  CCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGG  150
      |||    |||  |  ||||||| ||||||||||| |||||||| ||||||
seq2  CCA----TGTGTTTGTCAGGAA-TTTTCCCCTGTGCCCATATC-TCGAGG  132

seq1  CTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTG  200
      | |||||| ||||| |||||| ||||||||||||||||||| |||| |||
seq2  C-TTTCCCCACTTTCTCCTCTGTAAGTTTCAGTGTCTCTGG-TTTACGTG  180

seq1  GAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAAGGAGATAGTAATT  250
      |||||||||||||||||||||||| |||||||||||||||||||| ||| 
seq2  GAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATG  230

seq1  GATCAATTCACAATCTTCTACATGATAACAGCCAGTTGTGCCAGCATGAT  300
      |||||||||||| |||||||||||||||| ||||||||||||||||  ||
seq2  GATCAATTCACATTCTTCTACATGATAACCGCCAGTTGTGCCAGCACCAT  280

seq1  TTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTTTTAGCTCCCTTGT  350
      |||||| || ||||||| |||| |||||||||||||||||||||||||||
seq2  TTGTTG-AAGTGCTGTC-TTTTCTCCACTGGATAGTTTTAGCTCCCTTGT  328

seq1  CAAAGATCAAGTGACCATA  369
      |||||||||||||||||||
seq2  CAAAGATCAAGTGACCATA  347

seq1: chr3_45620633_45621620
seq2: B6Ng01-067D19.g_70_1051

seq1  GAATTCAGTATGTTGTATTTGTATGGTTGTATACATGTCACAATAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATGTTGTATTTGTATGGTTGTATACATGTCACAATAATAAA  50

seq1  GGAAAACAATAGAAATAATACTTCAATATATTAAAATACTCTAAAGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAATAGAAATAATACTTCAATATATTAAAATACTCTAAAGTAAA  100

seq1  AAGGTAATTTTCTTTATTATTTCTGATCTAACAATTGTATTCTTCTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATTTTCTTTATTATTTCTGATCTAACAATTGTATTCTTCTACAA  150

seq1  TTTAATGCTATAAGGTATTGTGATGAGCATAATTAATATCTTTTAGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTATAAGGTATTGTGATGAGCATAATTAATATCTTTTAGTGTA  200

seq1  ACTTTTAGTATATAATAGCATGAATTACGCATTATATTGTATATCATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAGTATATAATAGCATGAATTACGCATTATATTGTATATCATATA  250

seq1  TTATATTATACATTTTATATTATGTATTATTATCTTATACCATATAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATACATTTTATATTATGTATTATTATCTTATACCATATAATAT  300

seq1  GTATCATATTTTACATATTATATACTTTGTCATATGTTTATGATATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATATTTTACATATTATATACTTTGTCATATGTTTATGATATATTA  350

seq1  TACATCATATTATATTATATATAATATATTGTATTTCATATATTATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATATTATATTATATATAATATATTGTATTTCATATATTATATAT  400

seq1  TTTATACTATATATGGTAAAACGTTCACATATATGTATATATATACATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTATATATGGTAAAACGTTCACATATATGTATATATATACATAG  450

seq1  ATTTCTAGTTTTTTTTTAATACCAGTCATTCCATGTAATCCTCTATGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGTTTTTTTTTAATACCAGTCATTCCATGTAATCCTCTATGTAA  500

seq1  GGTCTCTGAAAGCACCAGGACCTGCAGAGTAATAATTCATATGGCACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGAAAGCACCAGGACCTGCAGAGTAATAATTCATATGGCACAAG  550

seq1  ATGAAACCCTGCCCAATAAGACTTATTAGCCAGTGTTAATTTAAATGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCCTGCCCAATAAGACTTATTAGCCAGTGTTAATTTAAATGTCA  600

seq1  AGAGTCTGACACAAGAAAATTTATTTTTGGTCTACTTACAAACAGTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGACACAAGAAAATTTATTTTTGGTCTACTTACAAACAGTACAA  650

seq1  ATTTGGAAAAAAGTTTCATGGTTACAATTACCTTAATCCTGTGTACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAAAAAGTTTCATGGTTACAATTACCTTAATCCTGTGTACATGA  700

seq1  TAAAGCTTAAGGAATTGACTATTTTGAAATTACTTGCAAATTACATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTAAGGAATTGACTATTTTGAAATTACTTGCAAATTACATGTGG  750

seq1  CCTCTTCCATAAAGATTGATTCTATAGATTGTATGAGCCCAGGCAAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCATAAAGATTGATTCTATAGATTGTATGAGCCCAGGCAAACTA  800

seq1  GGTATTATTTAACCCTACAGATAGCACAGGTGTCAAAATTCTATAAGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATTTAACCCTACAGATAGCACAGGTGTCAAAATTCTATAAGCTC  850

seq1  CCCTCATTTCCAGTCTTCTAGGTGAAAGACAGATTATATATTTCTTGTTA  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCTCATTTCCAGTC-TCTAGGTGAAAGACAGATTATATATTTCTTGTTA  899

seq1  AAGAGACAACCCTATTTGTGTAACATTCCTGGTTTCCCTAGTGCTTTCTG  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGAGACAACCCTATTTGTGT-ACATTCCTGGTTTCCCTAGTGCTTTCTG  948

seq1  TGAGGGTAGAGACCTTTGTACTCTCAACAATTCTCAGG  988
      ||| |||||||| |||||||||||||   |||||||||
seq2  TGA-GGTAGAGA-CTTTGTACTCTCA--CATTCTCAGG  982