BAC Information

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BAC

Clone NameB6Ng01-067D24
Chromosome10 (Build37)
Map Location 21,218,603 - 21,343,751
singlet/doubletdoublet
Overlap gene1700020N01Rik
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906
Downstream geneEG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067D24.bB6Ng01-067D24.g
ACCDH886200DH886201
length679582
definitionDH886200|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D24, 5' end.DH886201|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,343,073 - 21,343,751)(21,218,603 - 21,219,184)
sequence
gaattcttgtcatgactctcttcaatgatggactgcaatgtggaagtgta
agcagaataaatcatttcctcaatttgctttgacttatagactggtacca
taaataaaatgacacagggatgatgttaatgagaaattaatcaaccagag
aggcaaccagaataggcatgagaaatgaattttaagattctatgtatata
aactcagtgggtgtctagagttggccctggtctaagagagttccagctct
agtctccactgtgcccagcaccatggtggttcctgcttcatgtctcctcc
aagattcactgccatgtggttccccagtgttagccctcttgacttgagct
gactctgcatctcatcaccaagacccagatggtcccacttatctgaatcc
acagcccacagggttccacagtcttcaactcagaccaaggagagggtggt
gtgtccaggctggcactgtgtccaggtgcatttgaaagcacaaaggacac
acactgggtgggatgttcagcccctttaacagaagctaggtggagacttc
acagtttcttcatcaggagaaatcctcagagggaagagtctactggaaga
catctggatcttttagacctggcagggtgaagcctgattaagtagtctct
gcagggtaccacaagacctggaaaaggtg
gaattcaacaggtaagactgctgaaattttctggaaaatatttaaaatat
aagacctacatatctgcaaattgggcagatattgctaatttttctcattg
tttttctgatatatttatgtttcagattgttataaagaagaactcttggc
tgtaaataatagaaactactacctttaaaatagagtgagaaataaatgtt
ttgaatacaaggacttgaggggtttttccgggtctgcctttctccatctt
gactctgcatactccaggtttatacaatggcctcatctgaatctgtgatg
tatggctatttattgtggctaagcatgatggtgacaggcaacttcagaat
catttatcttaccatctactgcattggagggaaggaggcagcaaggaagg
gagggagggagggatggacagacagactgtagagagggccttccacatag
gagggcttagcaaacagccagtcctggtatactctggcctctctcacagg
ttgcagacagagcctcatttaaacaacataacctgcattctctgttggaa
agaagtgcacctgtcacctgtagaagaggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21343073_21343751
seq2: B6Ng01-067D24.b_44_722 (reverse)

seq1  CACCTTTTCCAGGTCTTGTGGTACCCTGCAGAGACTACTTAATCAGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTCCAGGTCTTGTGGTACCCTGCAGAGACTACTTAATCAGGCTT  50

seq1  CACCCTGCCAGGTCTAAAAGATCCAGATGTCTTCCAGTAGACTCTTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCCAGGTCTAAAAGATCCAGATGTCTTCCAGTAGACTCTTCCCT  100

seq1  CTGAGGATTTCTCCTGATGAAGAAACTGTGAAGTCTCCACCTAGCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATTTCTCCTGATGAAGAAACTGTGAAGTCTCCACCTAGCTTCTG  150

seq1  TTAAAGGGGCTGAACATCCCACCCAGTGTGTGTCCTTTGTGCTTTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGGCTGAACATCCCACCCAGTGTGTGTCCTTTGTGCTTTCAAAT  200

seq1  GCACCTGGACACAGTGCCAGCCTGGACACACCACCCTCTCCTTGGTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGGACACAGTGCCAGCCTGGACACACCACCCTCTCCTTGGTCTGA  250

seq1  GTTGAAGACTGTGGAACCCTGTGGGCTGTGGATTCAGATAAGTGGGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGACTGTGGAACCCTGTGGGCTGTGGATTCAGATAAGTGGGACCA  300

seq1  TCTGGGTCTTGGTGATGAGATGCAGAGTCAGCTCAAGTCAAGAGGGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCTTGGTGATGAGATGCAGAGTCAGCTCAAGTCAAGAGGGCTAA  350

seq1  CACTGGGGAACCACATGGCAGTGAATCTTGGAGGAGACATGAAGCAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGAACCACATGGCAGTGAATCTTGGAGGAGACATGAAGCAGGAA  400

seq1  CCACCATGGTGCTGGGCACAGTGGAGACTAGAGCTGGAACTCTCTTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGGTGCTGGGCACAGTGGAGACTAGAGCTGGAACTCTCTTAGAC  450

seq1  CAGGGCCAACTCTAGACACCCACTGAGTTTATATACATAGAATCTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAACTCTAGACACCCACTGAGTTTATATACATAGAATCTTAAAA  500

seq1  TTCATTTCTCATGCCTATTCTGGTTGCCTCTCTGGTTGATTAATTTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCTCATGCCTATTCTGGTTGCCTCTCTGGTTGATTAATTTCTCA  550

seq1  TTAACATCATCCCTGTGTCATTTTATTTATGGTACCAGTCTATAAGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCATCCCTGTGTCATTTTATTTATGGTACCAGTCTATAAGTCAA  600

seq1  AGCAAATTGAGGAAATGATTTATTCTGCTTACACTTCCACATTGCAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTGAGGAAATGATTTATTCTGCTTACACTTCCACATTGCAGTCC  650

seq1  ATCATTGAAGAGAGTCATGACAAGAATTC  679
      |||||||||||||||||||||||||||||
seq2  ATCATTGAAGAGAGTCATGACAAGAATTC  679

seq1: chr10_21218603_21219184
seq2: B6Ng01-067D24.g_67_648

seq1  GAATTCAACAGGTAAGACTGCTGAAATTTTCTGGAAAATATTTAAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGTAAGACTGCTGAAATTTTCTGGAAAATATTTAAAATAT  50

seq1  AAGACCTACATATCTGCAAATTGGGCAGATATTGCTAATTTTTCTCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTACATATCTGCAAATTGGGCAGATATTGCTAATTTTTCTCATTG  100

seq1  TTTTTCTGATATATTTATGTTTCAGATTGTTATAAAGAAGAACTCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGATATATTTATGTTTCAGATTGTTATAAAGAAGAACTCTTGGC  150

seq1  TGTAAATAATAGAAACTACTACCTTTAAAATAGAGTGAGAAATAAATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATAATAGAAACTACTACCTTTAAAATAGAGTGAGAAATAAATGTT  200

seq1  TTGAATACAAGGACTTGAGGGGTTTTTCCGGGTCTGCCTTTCTCCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATACAAGGACTTGAGGGGTTTTTCCGGGTCTGCCTTTCTCCATCTT  250

seq1  GACTCTGCATACTCCAGGTTTATACAATGGCCTCATCTGAATCTGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGCATACTCCAGGTTTATACAATGGCCTCATCTGAATCTGTGATG  300

seq1  TATGGCTATTTATTGTGGCTAAGCATGATGGTGACAGGCAACTTCAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTATTTATTGTGGCTAAGCATGATGGTGACAGGCAACTTCAGAAT  350

seq1  CATTTATCTTACCATCTACTGCATTGGAGGGAAGGAGGCAGCAAGGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCTTACCATCTACTGCATTGGAGGGAAGGAGGCAGCAAGGAAGG  400

seq1  GAGGGAGGGAGGGATGGACAGACAGACTGTAGAGAGGGCCTTCCACATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGAGGGATGGACAGACAGACTGTAGAGAGGGCCTTCCACATAG  450

seq1  GAGGGCTTAGCAAACAGCCAGTCCTGGTATACTCTGGCCTCTCTCACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTAGCAAACAGCCAGTCCTGGTATACTCTGGCCTCTCTCACAGG  500

seq1  TTGCAGACAGAGCCTCATTTAAACAACATAACCTGCATTCTCTGTTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACAGAGCCTCATTTAAACAACATAACCTGCATTCTCTGTTGGAA  550

seq1  AGAAGTGCACCTGTCACCTGTAGAAGAGGTGT  582
      ||||||||||||||||||||||||||||||||
seq2  AGAAGTGCACCTGTCACCTGTAGAAGAGGTGT  582