BAC Information

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BAC

Clone NameB6Ng01-067I10
Chromosome10 (Build37)
Map Location 47,816,438 - 47,930,649
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668252, LOC100042387, LOC100041663, LOC100042398
Downstream geneLOC546562, LOC100041689, Grik2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067I10.bB6Ng01-067I10.g
ACCDH886387DH886388
length7701,094
definitionDH886387|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I10, 5' end.DH886388|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,929,880 - 47,930,649)(47,816,438 - 47,817,538)
sequence
gaattctttcattggtagtttagtccctgggagcgctggaggtactagtt
ggttcatgttgttgttcctcttatggggctgcaaactccatcagctcctt
gggtcctttctctagttcctccattggagaccttgtgctcagaccaatta
attgctgagagcatccacctctgtatttgtcaggcactggcagagactct
caggagacaggtatatcaggttcctgccagcaagcacttgtgtctggttg
gtcaatgttgttcttcctatggggttgcaaacccctttataaaagtatgt
tagtccccaaataaaatgctataatacaactttggatacatgaaatcata
tctgcattctagctaggtatatttattaaagtatgtttgctgttaatttt
tgtgaagaaaggacttcaaaacatgtatagaaaacatctgaataaaatga
agatgatactgagacattctacacgtacaacttttgtagaaagagtttgt
tggccaagaagccatgaaagtgaaaagatcaaacttttaatgggtaacta
aaatattttactctagattttaaaaatctatgtactggcatgcatatcca
gaaatgaaactgaccagaattcagtaatatggcaatcaaataagaatcca
gtgactaacaaaaataataaaacataataaaaggagtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtttgtataccagcgcaaatgtgtt
ggtgctgatagtatgggaga
gaattccagatatttttcagtttgttcaatatcttatttgactcctaaag
agcatagccatttcctatgttggcattccaaaaattcaacactgatttac
ccaaaatgtcatgcatttttatataattagcttaattatatgaacaactt
ttaaaccaagtgattaatctaagacctgagttctcaagatgcacatattt
ttttaataagtaaataagactaaacttgaaaaacacatgtttaactaaaa
actagtatgtaataatgtagatttattattgtatattctaaatgttgact
tttagagaaataggtccaaagacaatataaaatatatattttcttggatg
gtattataaaaatgtttcactaaaatatgttttaatttattaattttaaa
ataaagaaccatacccaacttatagtcttccaccgtaccttgcttgcatt
atatctgatattcagaaaatcagtacaggtcaaataaaataaaattactt
cccgatatatactgtaaaatatgttaatgaaacattttctctctaaaata
tttgtgcatcttgcagtttttatttttacagtattttaagaatgttgtct
tatcttctatgtgtacatatatgcctgtataaatattcatacatgtatgc
acacatatttataaaagttgtatattatgtgacagttccactttcaattt
ctcttggtaaataaatattgaatatttgaagaaggaggttctttaaaggt
ctgtaagtttataatggtatgcttgtttgaatctttttcccagcctggat
aatctaaatgtcatttgcaaagttatattcttgtagaagcatccaggtat
attttcaagcaggctcaaacactaaatgaaaatgaagatgcaaattatga
atttgaaataaactctaagcaaaaaagactatatgtttatacctagaaca
gagagagattaaattagaaagatcatactacttagttgtttactaatacc
aatccctttctgctctctgctctttttcttccctacatccttctcgttct
catctttttttttctttttgtccgttctaaaacacagtcttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47929880_47930649
seq2: B6Ng01-067I10.b_45_814 (reverse)

seq1  TCTCCCATACTCTCAGCACCAACACATATGCACAGGTATACAAAGACACA  50
      ||||||||||| ||||||||||||||| ||| | |||||||||| |||||
seq2  TCTCCCATACTATCAGCACCAACACATTTGCGCTGGTATACAAACACACA  50

seq1  CACACACACACACACACACACACACACACACACACTCCTTTTATTATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACTCCTTTTATTATGTT  100

seq1  TTATTATTTTTGTTAGTCACTGGATTCTTATTTGATTGCCATATTACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTTGTTAGTCACTGGATTCTTATTTGATTGCCATATTACTGA  150

seq1  ATTCTGGTCAGTTTCATTTCTGGATATGCATGCCAGTACATAGATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTCAGTTTCATTTCTGGATATGCATGCCAGTACATAGATTTTTA  200

seq1  AAATCTAGAGTAAAATATTTTAGTTACCCATTAAAAGTTTGATCTTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGAGTAAAATATTTTAGTTACCCATTAAAAGTTTGATCTTTTCA  250

seq1  CTTTCATGGCTTCTTGGCCAACAAACTCTTTCTACAAAAGTTGTACGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGGCTTCTTGGCCAACAAACTCTTTCTACAAAAGTTGTACGTGT  300

seq1  AGAATGTCTCAGTATCATCTTCATTTTATTCAGATGTTTTCTATACATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTCAGTATCATCTTCATTTTATTCAGATGTTTTCTATACATGT  350

seq1  TTTGAAGTCCTTTCTTCACAAAAATTAACAGCAAACATACTTTAATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTCCTTTCTTCACAAAAATTAACAGCAAACATACTTTAATAAAT  400

seq1  ATACCTAGCTAGAATGCAGATATGATTTCATGTATCCAAAGTTGTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGCTAGAATGCAGATATGATTTCATGTATCCAAAGTTGTATTAT  450

seq1  AGCATTTTATTTGGGGACTAACATACTTTTATAAAGGGGTTTGCAACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTATTTGGGGACTAACATACTTTTATAAAGGGGTTTGCAACCCC  500

seq1  ATAGGAAGAACAACATTGACCAACCAGACACAAGTGCTTGCTGGCAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGAACAACATTGACCAACCAGACACAAGTGCTTGCTGGCAGGAA  550

seq1  CCTGATATACCTGTCTCCTGAGAGTCTCTGCCAGTGCCTGACAAATACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATACCTGTCTCCTGAGAGTCTCTGCCAGTGCCTGACAAATACAG  600

seq1  AGGTGGATGCTCTCAGCAATTAATTGGTCTGAGCACAAGGTCTCCAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATGCTCTCAGCAATTAATTGGTCTGAGCACAAGGTCTCCAATGG  650

seq1  AGGAACTAGAGAAAGGACCCAAGGAGCTGATGGAGTTTGCAGCCCCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTAGAGAAAGGACCCAAGGAGCTGATGGAGTTTGCAGCCCCATAA  700

seq1  GAGGAACAACAACATGAACCAACTAGTACCTCCAGCGCTCCCAGGGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACAACAACATGAACCAACTAGTACCTCCAGCGCTCCCAGGGACTA  750

seq1  AACTACCAATGAAAGAATTC  770
      ||||||||||||||||||||
seq2  AACTACCAATGAAAGAATTC  770

seq1: chr10_47816438_47817538
seq2: B6Ng01-067I10.g_65_1158

seq1  GAATTCCAGATATTTTTCAGTTTGTTCAATATCTTATTTGACTCCTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATATTTTTCAGTTTGTTCAATATCTTATTTGACTCCTAAAG  50

seq1  AGCATAGCCATTTCCTATGTTGGCATTCCAAAAATTCAACACTGATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGCCATTTCCTATGTTGGCATTCCAAAAATTCAACACTGATTTAC  100

seq1  CCAAAATGTCATGCATTTTTATATAATTAGCTTAATTATATGAACAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGTCATGCATTTTTATATAATTAGCTTAATTATATGAACAACTT  150

seq1  TTAAACCAAGTGATTAATCTAAGACCTGAGTTCTCAAGATGCACATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAAGTGATTAATCTAAGACCTGAGTTCTCAAGATGCACATATTT  200

seq1  TTTTAATAAGTAAATAAGACTAAACTTGAAAAACACATGTTTAACTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAAGTAAATAAGACTAAACTTGAAAAACACATGTTTAACTAAAA  250

seq1  ACTAGTATGTAATAATGTAGATTTATTATTGTATATTCTAAATGTTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTATGTAATAATGTAGATTTATTATTGTATATTCTAAATGTTGACT  300

seq1  TTTAGAGAAATAGGTCCAAAGACAATATAAAATATATATTTTCTTGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAAATAGGTCCAAAGACAATATAAAATATATATTTTCTTGGATG  350

seq1  GTATTATAAAAATGTTTCACTAAAATATGTTTTAATTTATTAATTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATAAAAATGTTTCACTAAAATATGTTTTAATTTATTAATTTTAAA  400

seq1  ATAAAGAACCATACCCAACTTATAGTCTTCCACCGTACCTTGCTTGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAACCATACCCAACTTATAGTCTTCCACCGTACCTTGCTTGCATT  450

seq1  ATATCTGATATTCAGAAAATCAGTACAGGTCAAATAAAATAAAATTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGATATTCAGAAAATCAGTACAGGTCAAATAAAATAAAATTACTT  500

seq1  CCCGATATATACTGTAAAATATGTTAATGAAACATTTTCTCTCTAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGATATATACTGTAAAATATGTTAATGAAACATTTTCTCTCTAAAATA  550

seq1  TTTGTGCATCTTGCAGTTTTTATTTTTACAGTATTTTAAGAATGTTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCATCTTGCAGTTTTTATTTTTACAGTATTTTAAGAATGTTGTCT  600

seq1  TATCTTCTATGTGTACATATATGCCTGTATAAATATTCATACATGTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTATGTGTACATATATGCCTGTATAAATATTCATACATGTATGC  650

seq1  ACACATATTTATAAAAGTTGTATATTATGTGACAGTTCCACTTTCAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATTTATAAAAGTTGTATATTATGTGACAGTTCCACTTTCAATTT  700

seq1  CTCTTGGTAAATAAATATTGAATATTTGAAGAAGGAGGTTCTTTAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGTAAATAAATATTGAATATTTGAAGAAGGAGGTTCTTTAAAGGT  750

seq1  CTGTAAGTTTATAATGGTATGCTTGTTTGAATCTTTTTCCCAGCCTGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGTTTATAATGGTATGCTTGTTTGAATCTTTTTCCCAGCCTGGAT  800

seq1  AATCTAAATGTCATTTGCAAAGTTATATTCTTGTAGAAGCATCCAGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATGTCATTTGCAAAGTTATATTCTTGTAGAAGCATCCAGGTAT  850

seq1  ATTTTCAAGCAGGCTCAAACACTAAATGAAAATGAAGATGCAAATTATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAGCAGGCTCAAACACTAAATGAAAATGAAGATGCAAATTATGA  900

seq1  ATTTGAAATAAACTCTAAGCAAAAAAAGACTATATGTTTATACCTAGAAC  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTTGAAATAAACTCTAAGC-AAAAAAGACTATATGTTTATACCTAGAAC  949

seq1  AGAGAGAGATTAAATTAGAAAGATCATACTAACTTAGTTGTGTACTAATA  1000
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  AGAGAGAGATTAAATTAGAAAGATCATACT-ACTTAGTTGTTTACTAATA  998

seq1  CCAATCCCTTTCTGCTCTCTGCTCTTTTTCTTTCCCTACATCCCTTCCTC  1050
      |||||||||||||||||||||||||||||| ||||||||||||  | |||
seq2  CCAATCCCTTTCTGCTCTCTGCTCTTTTTC-TTCCCTACATCC--TTCTC  1045

seq1  GTTCTCATTCTTTTTTTTTCTTTTTGTCCCTTTCTAAAACACAGTCTTCT  1100
      ||||||| ||||||||||||||||||| || |||||||||||||||||||
seq2  GTTCTCA-TCTTTTTTTTTCTTTTTGT-CCGTTCTAAAACACAGTCTTCT  1093

seq1  A  1101
      |
seq2  A  1094