BAC Information

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BAC

Clone NameB6Ng01-069H17
Chromosome10 (Build37)
Map Location 74,310,510 - 74,311,654
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh15, EG630453
Downstream geneEG623346, Gnaz, LOC100040057, Rab36, Bcr, Specc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H17.bB6Ng01-069H17.g
ACCDH887780DH887781
length1,1231,167
definitionDH887780|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H17, 5' end.DH887781|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttctcttctcaagatctaaaatcctcttggtgttaaagaat
cagtggccgatattcacagagacattttcttctgggcaacatcacttagc
taggaacttttaaaacattaggagctagagaaaacaagcatagatttcta
ttcttttggtaaagagcttcgggaaaaccagcctccctatataaaaccaa
gcaatcgtatgatgcactctcaatgggaatgtgtaagatacagaagtttc
tggcaacccaccacgacctggtgttagtgtttttttgtgcttcggtactg
cctattgtgtgggatctgcatttgaatagtagctcaacttccatcaaaca
gcagagggcgctccaacatcagtctgctttctgttctactcggttcagtt
tagtcataaaaattaacccttaaatgtgaaaaaattcccaagtaacatag
cacacacccaaatgggtacaattgatcaaagtttcaaggaagtgtagcgc
tgagtctgaaacttgtctttgggggaaattgttaaaagtctctgtgacac
agaagaacggacgtcacttgaatacagagctggtgtactgttctagctta
gagcaatggaatcaaatagaatcatcggcacagtttgcaatcttgcaggg
tggccacaggaaggtcactccttggtttgtttttgccgaacttattttca
aagttgcttagcctaatttgatacaagatgtatacaaccattacttcaat
agtgatatcaatgttccggaatattagcgtgtgattgtaacgacggaaat
attgaatggaattatttttaagagctgaaaacttaaaaatctcagtatgt
gacagatgaatccatcctcatggatcgtgataaacaccaagagactaaga
catcacttttcatgtcttaaggatgtcttaaggatgaaacgggactggag
agtggctcagcacttgagagcacttgttctctgcagagatctgtgtcagt
tctcagcatcaacgcagctcacaaccacctgtaacttcaattcatgggta
gatcccctgtcttctgcagtgtaatatactctacacttcggcaactctct
tatccatatgtaaatcattaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccggtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcttcca
atggagagctagagaaagaaccaaggaactcatggatcttgcaccctata
tgtgacaactttatgaactaaccagtaccccgaactctgactctagctgc
ttatgttcaaaagaatggctaaatggctatccttgaaaaaagcccattga
cacccaactttgtagtcccattacagggaatgccaggccaataaggggat
gtgtgggtaggtgatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_74310510_74311654
seq2: B6Ng01-069H17.b_49_1171 (reverse)

seq1  TTTTAAATTGTATTTACATTATGGGTATGAGAGTTTTGCCCGAAGTGTAT  50
      ||||||  || ||||||| ||||| || |||||||    |||||||||| 
seq2  TTTTAA--TG-ATTTACA-TATGGATAAGAGAGTT---GCCGAAGTGTA-  42

seq1  GAGTATATTACACCTGCAGAAGACAGGGGTATCTTACCCCATGGAATTGG  100
      |||||||||||| |||||||||||||||| ||||   ||||| |||||| 
seq2  GAGTATATTACA-CTGCAGAAGACAGGGG-ATCT--ACCCAT-GAATTGA  87

seq1  AGTTACAGGTGGTTGTGAGCTGCCGTGTGGATGCTGAGAACTGAACACAG  150
      |||||||||||||||||||||||   || |||||||||||||| ||||||
seq2  AGTTACAGGTGGTTGTGAGCTGC---GTTGATGCTGAGAACTG-ACACAG  133

seq1  ATCCTCTGCAAGAGGAACAAGTGCTCTCAAGTGCTGAGCCACCTCTCCAG  200
      || |||||| ||| ||||||||||||||||||||||||||| ||||||||
seq2  AT-CTCTGC-AGA-GAACAAGTGCTCTCAAGTGCTGAGCCA-CTCTCCAG  179

seq1  TCCCGTTTTCATCCTTAAGACATCCTTAAGACATGAAAAGTGATGTCTTA  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCG-TTTCATCCTTAAGACATCCTTAAGACATGAAAAGTGATGTCTTA  228

seq1  GTCTCTTGGTGTTTATCACGATCCATGAGGATGGATTCATCTGTCACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGGTGTTTATCACGATCCATGAGGATGGATTCATCTGTCACATA  278

seq1  CTGAGATTTTTAAGTTTTCAGCTCTTAAAAATAATTCCATTCAATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTTTAAGTTTTCAGCTCTTAAAAATAATTCCATTCAATATTTC  328

seq1  CGTCGTTACAATCACACGCTAATATTCCGGAACATTGATATCACTATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGTTACAATCACACGCTAATATTCCGGAACATTGATATCACTATTGA  378

seq1  AGTAATGGTTGTATACATCTTGTATCAAATTAGGCTAAGCAACTTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGTTGTATACATCTTGTATCAAATTAGGCTAAGCAACTTTGAAA  428

seq1  ATAAGTTCGGCAAAAACAAACCAAGGAGTGACCTTCCTGTGGCCACCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTCGGCAAAAACAAACCAAGGAGTGACCTTCCTGTGGCCACCCTG  478

seq1  CAAGATTGCAAACTGTGCCGATGATTCTATTTGATTCCATTGCTCTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTGCAAACTGTGCCGATGATTCTATTTGATTCCATTGCTCTAAGC  528

seq1  TAGAACAGTACACCAGCTCTGTATTCAAGTGACGTCCGTTCTTCTGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAGTACACCAGCTCTGTATTCAAGTGACGTCCGTTCTTCTGTGTC  578

seq1  ACAGAGACTTTTAACAATTTCCCCCAAAGACAAGTTTCAGACTCAGCGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACTTTTAACAATTTCCCCCAAAGACAAGTTTCAGACTCAGCGCT  628

seq1  ACACTTCCTTGAAACTTTGATCAATTGTACCCATTTGGGTGTGTGCTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCTTGAAACTTTGATCAATTGTACCCATTTGGGTGTGTGCTATG  678

seq1  TTACTTGGGAATTTTTTCACATTTAAGGGTTAATTTTTATGACTAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGGGAATTTTTTCACATTTAAGGGTTAATTTTTATGACTAAACTG  728

seq1  AACCGAGTAGAACAGAAAGCAGACTGATGTTGGAGCGCCCTCTGCTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAGTAGAACAGAAAGCAGACTGATGTTGGAGCGCCCTCTGCTGTTT  778

seq1  GATGGAAGTTGAGCTACTATTCAAATGCAGATCCCACACAATAGGCAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGTTGAGCTACTATTCAAATGCAGATCCCACACAATAGGCAGTA  828

seq1  CCGAAGCACAAAAAAACACTAACACCAGGTCGTGGTGGGTTGCCAGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGCACAAAAAAACACTAACACCAGGTCGTGGTGGGTTGCCAGAAAC  878

seq1  TTCTGTATCTTACACATTCCCATTGAGAGTGCATCATACGATTGCTTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATCTTACACATTCCCATTGAGAGTGCATCATACGATTGCTTGGT  928

seq1  TTTATATAGGGAGGCTGGTTTTCCCGAAGCTCTTTACCAAAAGAATAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAGGGAGGCTGGTTTTCCCGAAGCTCTTTACCAAAAGAATAGAA  978

seq1  ATCTATGCTTGTTTTCTCTAGCTCCTAATGTTTTAAAAGTTCCTAGCTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGCTTGTTTTCTCTAGCTCCTAATGTTTTAAAAGTTCCTAGCTAA  1028

seq1  GTGATGTTGCCCAGAAGAAAATGTCTCTGTGAATATCGGCCACTGATTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTGCCCAGAAGAAAATGTCTCTGTGAATATCGGCCACTGATTCT  1078

seq1  TTAACACCAAGAGGATTTTAGATCTTGAGAAGAGAAAGAGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACCAAGAGGATTTTAGATCTTGAGAAGAGAAAGAGAATTC  1123