BAC Information

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BAC

Clone NameB6Ng01-069K20
Chromosome10 (Build37)
Map Location 31,728,551 - 31,729,666
singlet/doubletsinglet
Overlap geneTcba1
Upstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638
Downstream geneEG667761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069K20.bB6Ng01-069K20.g
ACCDH887915DH887916
length1,2151,100
definitionDH887915|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K20, 5' end.DH887916|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaataggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctacagataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatctttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaaaaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggatataacagaaaaaaaccaatac
aaggacggacacgccctagaaaaaacagagatatcctcaacaacctaaag
agacagccacagacagaatgcacttaacaacaaataacagagcacatact
tcttaatttccttaatatcatgactcatccataaaagacttgactgagaa
ctggctacaaacgactcacatctgctgcttaggaatcatctcagaaagac
agaactactaagtagctgaaacatttccagcaatgtctggagaacagcgt
ggagggccactctct
gaattctttcagtttatgggtcaggtatgccatcacagagcaggaatgta
accatgagaaattataattaattcctttctgctactctgaggttagactt
tggaaaagtgccgtgtatctattaatgcctttaaacttttaaatcccctt
taagtgaggttaatatgattatctctataataaaggacaaggaccaaaga
acgtaacattaggcagctagtgaaagatgaaagcaatgacgtattctagg
tggcctggtcttagtgcctttgtgattactcactgccacattctgtatct
ttccattgcattttgaagatgagttttgaaatattgaaaaagaaaagttt
gggatgtccctctccccacctgctatgaggactgtgaattcaaaggaact
ctgggattctgaatatacctaagtgaaaaatgaaggcgaggagatacagg
caggtgaaagagatgccccttcccccacccctcacaccttttccatctct
ctgtgcccaaaatctctgcatgactttaaatttcccaggtaccatgattt
ctagaacactacaactgactgagttttagagacattcaattatagtttct
aatttggagaagctatgatttgtcctcctgtcagatccctgcagatgatc
ctctaaagccattctggggtgagtgatgagagaataaaatagagttgact
ttaaccccaaggtttgtaatgattattttggctgacttgctttccttctc
cttttcatttcactctctaaatatggcattaagaggattttttgtttgtt
tgttttggtgttttctaagaactctgagaaagaagtacttatttttcttc
atcaaatcatttaaaatgaggagaaatgttggcctgttatatgagaaatt
gtgttcatcccagacaataacagagttggagtggcattctgtttcctgct
tatcttctccctgaacatcttatgctcattatattgagtttgcagttcta
aaccacaagcaattcttctccccgaattccctagcaaccacaataagata
agacacctgatctcgctattgggtatgcccaaagagattgacaactctga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31728551_31729666
seq2: B6Ng01-069K20.g_69_1168

seq1  GAATTCTTTCAGTTTATGGGTCAGGTATGCCATCACAGAGCAGGAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTTTATGGGTCAGGTATGCCATCACAGAGCAGGAATGTA  50

seq1  ACCATGAGAAATTATAATTAATTCCTTTCTGCTACTCTGAGGTTAGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGAAATTATAATTAATTCCTTTCTGCTACTCTGAGGTTAGACTT  100

seq1  TGGAAAAGTGCCGTGTATCTATTAATGCCTTTAAACTTTTAAATCCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGTGCCGTGTATCTATTAATGCCTTTAAACTTTTAAATCCCCTT  150

seq1  TAAGTGAGGTTAATATGATTATCTCTATAATAAAGGACAAGGACCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAGGTTAATATGATTATCTCTATAATAAAGGACAAGGACCAAAGA  200

seq1  ACGTAACATTAGGCAGCTAGTGAAAGATGAAAGCAATGACGTATTCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACATTAGGCAGCTAGTGAAAGATGAAAGCAATGACGTATTCTAGG  250

seq1  TGGCCTGGTCTTAGTGCCTTTGTGATTACTCACTGCCACATTCTGTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGGTCTTAGTGCCTTTGTGATTACTCACTGCCACATTCTGTATCT  300

seq1  TTCCATTGCATTTTGAAGATGAGTTTTGAAATATTGAAAAAGAAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGCATTTTGAAGATGAGTTTTGAAATATTGAAAAAGAAAAGTTT  350

seq1  GGGATGTCCCTCTCCCCACCTGCTATGAGGACTGTGAATTCAAAGGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTCCCTCTCCCCACCTGCTATGAGGACTGTGAATTCAAAGGAACT  400

seq1  CTGGGATTCTGAATATACCTAAGTGAAAAATGAAGGCGAGGAGATACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTCTGAATATACCTAAGTGAAAAATGAAGGCGAGGAGATACAGG  450

seq1  CAGGTGAAAGAGATGCCCCTTCCCCCACCCCTCACACCTTTTCCATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAAAGAGATGCCCCTTCCCCCACCCCTCACACCTTTTCCATCTCT  500

seq1  CTGTGCCCAAAATCTCTGCATGACTTTAAATTTCCCAGGTACCATGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCCAAAATCTCTGCATGACTTTAAATTTCCCAGGTACCATGATTT  550

seq1  CTAGAACACTACAACTGACTGAGTTTTAGAGACATTCAATTATAGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACACTACAACTGACTGAGTTTTAGAGACATTCAATTATAGTTTCT  600

seq1  AATTTGGAGAAGCTATGATTTGTCCTCCTGTCAGATCCCTGCAGATGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAGAAGCTATGATTTGTCCTCCTGTCAGATCCCTGCAGATGATC  650

seq1  CTCTAAAGCCATTCTGGGGTGAGTGATGAGAGAATAAAATAGAGTTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGCCATTCTGGGGTGAGTGATGAGAGAATAAAATAGAGTTGACT  700

seq1  TTAACCCCAAGGTTTGTAATGATTATTTTGGCTGACTTGCTTTCCTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCCAAGGTTTGTAATGATTATTTTGGCTGACTTGCTTTCCTTCTC  750

seq1  CTTTTCATTTCACTCTCTAAATATGGCATTAAGAGGATTTTTTGTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTCACTCTCTAAATATGGCATTAAGAGGATTTTTTGTTTGTT  800

seq1  TGTTTTGGTGTTTTCTAAGAACTCTGAGAAAGAAGTACTTATTTTTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGTGTTTTCTAAGAACTCTGAGAAAGAAGTACTTATTTTTCTTC  850

seq1  ATCAAATCATTTAAAATGAGGAGAAATGTTGGCCTGTTATATGAGAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCATTTAAAATGAGGAGAAATGTTGGCCTGTTATATGAGAAATT  900

seq1  GTGTTCATCCCAGACAATAACAGAGTTGGAGGTGGCATTCTGTTTTCCTG  950
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  GTGTTCATCCCAGACAATAACAGAGTTGGA-GTGGCATTCTG-TTTCCTG  948

seq1  CTTATCTTCTCCCTGAACAATTCTTATGCTCATTTATATTGAGGTTTGCA  1000
      |||||||||||||||||||  ||||||||||| ||||||||| |||||| 
seq2  CTTATCTTCTCCCTGAACA--TCTTATGCTCA-TTATATTGA-GTTTGC-  993

seq1  AGTTCTTAAACCACAAGCAAATCCTTCTACACCCAGAATTCCCTAAGCAA  1050
      ||||| ||||||||||||||    |||| | ||| ||||||||| ||| |
seq2  AGTTC-TAAACCACAAGCAA----TTCTTCTCCCCGAATTCCCT-AGC-A  1036

seq1  ACCACAAT-AGATAAGACACCTGATCTGCCGCTATTGGGTATGCCCACAA  1099
      |||||||| ||||||||||||||||||  |||||||||||||||||| ||
seq2  ACCACAATAAGATAAGACACCTGATCT--CGCTATTGGGTATGCCCA-AA  1083

seq1  GAGATTGACAACTCTGA  1116
      |||||||||||||||||
seq2  GAGATTGACAACTCTGA  1100