BAC Information

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BAC

Clone NameB6Ng01-069M12
Chromosome10 (Build37)
Map Location 119,749,863 - 119,886,231
singlet/doubletdoublet
Overlap geneHmga2
Upstream geneGrip1, Helb, Irak3, Tmbim4, 1190005P17Rik
Downstream geneLOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069M12.bB6Ng01-069M12.g
ACCDH887981DH887982
length7291,067
definitionDH887981|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M12, 5' end.DH887982|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,749,863 - 119,750,591)(119,885,146 - 119,886,231)
sequence
gaattcactttgccatggttaaggagaggacctggctttctgatggctcc
attcaagtcaaggacagtgtcaagttctgataggggcctctgtaggtagt
atatataggcccatgtgtaaaggtttggttcattgccatagtgaagtcac
tttaggctgaatttaaatggctaccctccctaatgggactcttctaaggt
tcctagatgacaggaaccttatatatatatatatatatatatatatattc
atgtataaatctctgggggagctgtgatctgtgaagacagtcactatctg
tgtcccttgaatggatctgggtttgacccaaagatgtgattcacaatctt
ttggaatgcattgagtctttctcttccattttcttgaccattctcataca
tcccagccccacctccagtggcctctttgttttctttctttttattattt
attttatttatttacatttcaaatgttattcctcccatcccttccccctc
cccctgcttctataagggtgctcccccacccacccatttctgccttacca
ccctagcattcccttatgatggggcatcaagcctcctcagaaccaaggcc
ctctcctcccattgatgccagataaggccatcctctgttacatatgcaac
tggagccatggtttctccatgtgtactctttggttggtggtttggtcctt
ggaagctctggggtaggggtggggtgggg
gaattcaaagaccctgttcccaagtaaggcttcactcctgtagatgcaac
atgagttagaacttcaagaaatcttcttagggatgcaatgtcacctgtgc
caggcctcctcagcttcaagctcacttagaataaggcaggtatttgtaac
ccaccaggagaacgtacaaggggtttcattaaatctaaagcattgtggcc
aacatttgcagtttgttataagaacacgttggaaagatttataggctgtt
tggggtgtgagttttagattacctccttcctttgaactggtggttgggcc
cagtgttttaaaagtggggaatgaatagatttgaaagcgtctaatttttg
tctttaatgaagcttgtaagcttgggaatttctaaaaagctatctaaatt
cggtagtgcggaacactaagagtgtgtctgtgatttccaaatttcagggc
acttgtttgcatatgctaagcctctatttaagacaaaaagtagaacttca
ggtcagtgaggttctggtttgcttctctaggcagaaagtctagggtgaaa
tgtttgcatgaatatttaatggtgaatgcctatgaattttcccaaacata
tcccccaattctcaaaggtactcattcccttaaacttcaccggttgtata
caattctctccttattataaccattctctttaatatgacattattggatt
aggaagaagtgtatatagaaccttaatttgtatcttttaaaaatatttta
agactatgtaataggagtaaactgccttgtctttttttttttttttaaac
tgattttatataggcgattttattctgcctttaaattaatgtggtttagc
ttccaaccctacccctcccataggctagtcccattccctaatatcttaca
gacctgggagaacaatatttcccttctgtcaatttgataatacgtgtgtg
ctgtgctcatggtggcctataactccatgaagtcgtgggctgcaagagcc
tcgatttccgtacctggaactggagaagtctgtaatgtgcttacaataat
gatgagggtcaggcgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119749863_119750591
seq2: B6Ng01-069M12.b_50_778

seq1  GAATTCACTTTGCCATGGTTAAGGAGAGGACCTGGCTTTCTGATGGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGCCATGGTTAAGGAGAGGACCTGGCTTTCTGATGGCTCC  50

seq1  ATTCAAGTCAAGGACAGTGTCAAGTTCTGATAGGGGCCTCTGTAGGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTCAAGGACAGTGTCAAGTTCTGATAGGGGCCTCTGTAGGTAGT  100

seq1  ATATATAGGCCCATGTGTAAAGGTTTGGTTCATTGCCATAGTGAAGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGGCCCATGTGTAAAGGTTTGGTTCATTGCCATAGTGAAGTCAC  150

seq1  TTTAGGCTGAATTTAAATGGCTACCCTCCCTAATGGGACTCTTCTAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTGAATTTAAATGGCTACCCTCCCTAATGGGACTCTTCTAAGGT  200

seq1  TCCTAGATGACAGGAACCTTATATATATATATATATATATATATATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATGACAGGAACCTTATATATATATATATATATATATATATATTC  250

seq1  ATGTATAAATCTCTGGGGGAGCTGTGATCTGTGAAGACAGTCACTATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAAATCTCTGGGGGAGCTGTGATCTGTGAAGACAGTCACTATCTG  300

seq1  TGTCCCTTGAATGGATCTGGGTTTGACCCAAAGATGTGATTCACAATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTGAATGGATCTGGGTTTGACCCAAAGATGTGATTCACAATCTT  350

seq1  TTGGAATGCATTGAGTCTTTCTCTTCCATTTTCTTGACCATTCTCATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGCATTGAGTCTTTCTCTTCCATTTTCTTGACCATTCTCATACA  400

seq1  TCCCAGCCCCACCTCCAGTGGCCTCTTTGTTTTCTTTCTTTTTATTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCCCACCTCCAGTGGCCTCTTTGTTTTCTTTCTTTTTATTATTT  450

seq1  ATTTTATTTATTTACATTTCAAATGTTATTCCTCCCATCCCTTCCCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTATTTACATTTCAAATGTTATTCCTCCCATCCCTTCCCCCTC  500

seq1  CCCCTGCTTCTATAAGGGTGCTCCCCCACCCACCCATTTCTGCCTTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCTTCTATAAGGGTGCTCCCCCACCCACCCATTTCTGCCTTACCA  550

seq1  CCCTAGCATTCCCTTATGATGGGGCATCAAGCCTCCTCAGAACCAAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCATTCCCTTATGATGGGGCATCAAGCCTCCTCAGAACCAAGGCC  600

seq1  CTCTCCTCCCATTGATGCCAGATAAGGCCATCCTCTGTTACATATGCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCCCATTGATGCCAGATAAGGCCATCCTCTGTTACATATGCAAC  650

seq1  TGGAGCCATGGTTTCTCCATGTGTACTCTTTGGTTGGTGGTTTGGTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCATGGTTTCTCCATGTGTACTCTTTGGTTGGTGGTTTGGTCCTT  700

seq1  GGAAGCTCTGGGGTAGGGGTGGGGTGGGG  729
      |||||||||||||||||||||||||||||
seq2  GGAAGCTCTGGGGTAGGGGTGGGGTGGGG  729

seq1: chr10_119885146_119886231
seq2: B6Ng01-069M12.g_67_1133 (reverse)

seq1  AACGCCTGCACCTCCATCATTATTGCTAAAGCACCATTACAGAAATTTCT  50
      |||||||| |||  |||||||||||   ||||| ||||||||  | ||||
seq2  AACGCCTG-ACCCTCATCATTATTG--TAAGCA-CATTACAG--ACTTCT  44

seq1  CACAGTTCCAGGGTACGGAAATCTGAGGCTACTTTGCAAGCCCACGGACT  100
      | |||||||| |||||||||||| ||||||   |||| ||||||| ||||
seq2  C-CAGTTCCA-GGTACGGAAATC-GAGGCT--CTTGC-AGCCCAC-GACT  87

seq1  TCATGGGAGTTAATAGGCCACCACTGAGCACAGCACACACGTAATTATCA  150
      |||| |||||| ||||||||||| |||||||||||||||||| |||||||
seq2  TCAT-GGAGTT-ATAGGCCACCA-TGAGCACAGCACACACGT-ATTATCA  133

seq1  AAATGACAGAAGGGAAAATATTGTTCTCCCAGGTCTGTAAGATTATAGGG  200
      || ||||||||||| ||||||||||||||||||||||||||||  |||||
seq2  AATTGACAGAAGGG-AAATATTGTTCTCCCAGGTCTGTAAGATATTAGGG  182

seq1  AATGGGGACTAGCCTTATGGGAGGGGTAGGGTT-GAAGCTAAACCACATT  249
      ||| |||||||||| |||||||||||||||||| ||||||||||||||||
seq2  AAT-GGGACTAGCC-TATGGGAGGGGTAGGGTTGGAAGCTAAACCACATT  230

seq1  AATTTAAAGGCAGAATAAAATCGCCTATATAAAAATCAGTTT-AAAAAAA  298
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  AATTTAAAGGCAGAATAAAATCGCCTATAT-AAAATCAGTTTAAAAAAAA  279

seq1  AAAAAAAGACAAGGCAGTTTACTCCTATTACATAGTCTTAAAATATTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGACAAGGCAGTTTACTCCTATTACATAGTCTTAAAATATTTTT  329

seq1  AAAAGATACAAATTAAGGTTCTATATACACTTCTTCCTAATCCAATAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATACAAATTAAGGTTCTATATACACTTCTTCCTAATCCAATAATG  379

seq1  TCATATTAAAGAGAATGGTTATAATAAGGAGAGAATTGTATACAACCGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTAAAGAGAATGGTTATAATAAGGAGAGAATTGTATACAACCGGT  429

seq1  GAAGTTTAAGGGAATGAGTACCTTTGAGAATTGGGGGATATGTTTGGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTAAGGGAATGAGTACCTTTGAGAATTGGGGGATATGTTTGGGAA  479

seq1  AATTCATAGGCATTCACCATTAAATATTCATGCAAACATTTCACCCTAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATAGGCATTCACCATTAAATATTCATGCAAACATTTCACCCTAGA  529

seq1  CTTTCTGCCTAGAGAAGCAAACCAGAACCTCACTGACCTGAAGTTCTACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCCTAGAGAAGCAAACCAGAACCTCACTGACCTGAAGTTCTACT  579

seq1  TTTTGTCTTAAATAGAGGCTTAGCATATGCAAACAAGTGCCCTGAAATTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTAAATAGAGGCTTAGCATATGCAAACAAGTGCCCTGAAATTT  629

seq1  GGAAATCACAGACACACTCTTAGTGTTCCGCACTACCGAATTTAGATAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCACAGACACACTCTTAGTGTTCCGCACTACCGAATTTAGATAGC  679

seq1  TTTTTAGAAATTCCCAAGCTTACAAGCTTCATTAAAGACAAAAATTAGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAAATTCCCAAGCTTACAAGCTTCATTAAAGACAAAAATTAGAC  729

seq1  GCTTTCAAATCTATTCATTCCCCACTTTTAAAACACTGGGCCCAACCACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAAATCTATTCATTCCCCACTTTTAAAACACTGGGCCCAACCACC  779

seq1  AGTTCAAAGGAAGGAGGTAATCTAAAACTCACACCCCAAACAGCCTATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAGGAAGGAGGTAATCTAAAACTCACACCCCAAACAGCCTATAA  829

seq1  ATCTTTCCAACGTGTTCTTATAACAAACTGCAAATGTTGGCCACAATGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCAACGTGTTCTTATAACAAACTGCAAATGTTGGCCACAATGCT  879

seq1  TTAGATTTAATGAAACCCCTTGTACGTTCTCCTGGTGGGTTACAAATACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTAATGAAACCCCTTGTACGTTCTCCTGGTGGGTTACAAATACC  929

seq1  TGCCTTATTCTAAGTGAGCTTGAAGCTGAGGAGGCCTGGCACAGGTGACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATTCTAAGTGAGCTTGAAGCTGAGGAGGCCTGGCACAGGTGACA  979

seq1  TTGCATCCCTAAGAAGATTTCTTGAAGTTCTAACTCATGTTGCATCTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCCCTAAGAAGATTTCTTGAAGTTCTAACTCATGTTGCATCTACA  1029

seq1  GGAGTGAAGCCTTACTTGGGAACAGGGTCTTTGAATTC  1086
      ||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAAGCCTTACTTGGGAACAGGGTCTTTGAATTC  1067