BAC Information

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BAC

Clone NameB6Ng01-069M14
Chromosome10 (Build37)
Map Location 112,130,880 - 112,132,100
singlet/doubletsinglet
Overlap genenone
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
Downstream geneLOC100042639, 4921506J03Rik, LOC100042655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069M14.bB6Ng01-069M14.g
ACCDH887985DH887986
length1,2091,188
definitionDH887985|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M14, 5' end.DH887986|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagagaacccagcccagggatggcacctc
ccacaatgacccttgatcactaattgagaaaataccttacagctggatct
catgaaggcatttcctcaagggaggctcctttctctgtgataactccagc
ttatgtcaagttgacacacaaaatcagccagtacatctgagcactttctt
tttaggtttaataaaagtatatcaaccttgcagactgggatgagtctatg
tgagaaattattagttttgttatgttgtagtgtcataacccttctcagca
tcaacatcagctctcagaactctttcactaaacttacttactaagtactc
ttttctttccactcaacagcattatttcatactcaggctacaactttagt
aacagaaaaataaggagtaacagaaaaataagaatcacattttgttgttg
ttgtagttaaacaatgattacttgtgttcttttctcatatacaactaggg
ttattgtatccatactcatgtattcagagtagttaattattttaattctc
catggtagaatatattaactcatcttcaaaatatgcataattatttctag
gccaaactcaatagactgttccagaatggtgcattatgttgtactaatgt
taaaaaatactcaactaggccatggcaatcatactacatggaacaatagt
agtaataagaatacaatatacattttaattattgtttgcatgattctatg
atgtagattttatatatcttaaaatatatgatgaaactaaaacatcaaag
atcgttgtaccaatatttggaaagcaattcttaactactgagctgctgga
cattgatcatgtcttatggttgagcacaggaatcctttggagaactatca
aaaagactggatatggtaagaaccggtttgcctggatacagcatcctccc
ttttgagatttcaagagttgaagatcagaagacctccagggcctggtgga
tgttgggctcaggactgaaggctaccagtaaagcatggaataaactccgt
ttgtttataaatacggaatcttatgaggtttaaagtatattcccatcaca
tgactgcct
gaattctttgtttagctatgtgtctcagttttttagctgggctttgtggg
ttatgaacagcctcttgagttattcataaattttggatactaacccctct
gtcagaagtagcatgggtaaagatcctttcccaatacataaactgtcatt
ctgtcctattgatagtgtcttttgccttacatgaagcttttcagtttcat
gaggttccattttttaacttaatcttttattctcatttgtttatttattt
ctttacacgccagattttattcccttcttgatccaccctccgattgttcc
acatctcatacctcctccctgccccctgtctccacgatgatgtccccact
ctcccctccccccaaacccaaccccaccagacctctaaactcccttgggt
cttcagtctcttgaggagtagatgcatcagacctggcagtcctctgctgt
atgtgtgttgggggcctcatatcagctggtgtatgctgcctgcttggtgg
tccagtgttttgagagatctccggggtccaggttaattgagacttcggat
cctcttacaggatcaccctcctcctcagcttcttccagcttttctcaaat
tcaatcacaggggtcagcagcttctgtccattggttggatgcaagtatct
gcatctgacactttcagtttcttgttgggcctttcagaggacaatcatga
taggtccctttttgtgagcactccatagccttagtaatcgtgtcaagcct
tgagacctccccttgacctggatcccactttgggcctgtcgctgaacctt
tctttcctcaggctcctctccatttccatccctgcacttctttcagacag
gaataatttgtggatctgaattttgactgtgggatggaaacccatccctc
acttgattccttgtttttctgctggagtgggctcatagttcctctcccct
ctgtagacatttcatctaagaggttcctccttttgagtcctagagtccct
acctccaggtctctggtacttcaggagggtcccaactcctccctccggag
tttctgtttcactttttttgaggcctcaggctcagtcttccacccatacg
aatatgttactcttgctgccacgtccataccacctatctcccccatgatt
ggtataatccactccactctacctgagggcgcggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112130880_112132100
seq2: B6Ng01-069M14.b_46_1254

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGAGAACCCAGCCCAGGGATGGCACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGAGAACCCAGCCCAGGGATGGCACCTC  150

seq1  CCACAATGACCCTTGATCACTAATTGAGAAAATACCTTACAGCTGGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGACCCTTGATCACTAATTGAGAAAATACCTTACAGCTGGATCT  200

seq1  CATGAAGGCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGC  250

seq1  TTATGTCAAGTTGACACACAAAATCAGCCAGTACATCTGAGCACTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAAGTTGACACACAAAATCAGCCAGTACATCTGAGCACTTTCTT  300

seq1  TTTAGGTTTAATAAAAGTATATCAACCTTGCAGACTGGGATGAGTCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTTAATAAAAGTATATCAACCTTGCAGACTGGGATGAGTCTATG  350

seq1  TGAGAAATTATTAGTTTTGTTATGTTGTAGTGTCATAACCCTTCTCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTATTAGTTTTGTTATGTTGTAGTGTCATAACCCTTCTCAGCA  400

seq1  TCAACATCAGCTCTCAGAACTCTTTCACTAAACTTACTTACTAAGTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCAGCTCTCAGAACTCTTTCACTAAACTTACTTACTAAGTACTC  450

seq1  TTTTCTTTCCACTCAACAGCATTATTTCATACTCAGGCTACAACTTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCACTCAACAGCATTATTTCATACTCAGGCTACAACTTTAGT  500

seq1  AACAGAAAAATAAGGAGTAACAGAAAAATAAGAATCACATTTTGTTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAAATAAGGAGTAACAGAAAAATAAGAATCACATTTTGTTGTTG  550

seq1  TTGTAGTTAAACAATGATTACTTGTGTTCTTTTCTCATATACAACTAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTAAACAATGATTACTTGTGTTCTTTTCTCATATACAACTAGGG  600

seq1  TTATTGTATCCATACTCATGTATTCAGAGTAGTTAATTATTTTAATTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTATCCATACTCATGTATTCAGAGTAGTTAATTATTTTAATTCTC  650

seq1  CATGGTAGAATATATTAACTCATCTTCAAAATATGCATAATTATTTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGAATATATTAACTCATCTTCAAAATATGCATAATTATTTCTAG  700

seq1  GCCAAACTCAATAGACTGTTCCAGAATGGTGCATTATGTTGTACTAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACTCAATAGACTGTTCCAGAATGGTGCATTATGTTGTACTAATGT  750

seq1  TAAAAAATACTCAACTAGGCCATGGCAATCATACTACATGGAACAATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATACTCAACTAGGCCATGGCAATCATACTACATGGAACAATAGT  800

seq1  AGTAATAAGAATACAATATACATTTTAATTATTGTTTGCATGATTCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAGAATACAATATACATTTTAATTATTGTTTGCATGATTCTATG  850

seq1  ATGTAGATTTTATATATCTTAAAATATATGATGAAACTAAAACATCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATTTTATATATCTTAAAATATATGATGAAACTAAAACATCAAAG  900

seq1  ATCGTTGTACCAATATTTGGAAAGCAATTCTTAACTACTGAGCTGCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTGTACCAATATTTGGAAAGCAATTCTTAACTACTGAGCTGCTGGA  950

seq1  CATTGATCATGTCTTATGGTTGAAGCACAGGAATCC-TTGGAGATACTTA  999
      |||||||||||||||||||||| ||||||||||||| ||||||| || ||
seq2  CATTGATCATGTCTTATGGTTG-AGCACAGGAATCCTTTGGAGA-AC-TA  997

seq1  TCAAAAAGACTGGATAT-GTAAGAA-CGGTTTGCCTGGATACAGCATCCT  1047
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  TCAAAAAGACTGGATATGGTAAGAACCGGTTTGCCTGGATACAGCATCCT  1047

seq1  CACTTTTGAGATTTCAAAGAGGTTGAAGATCAGAGGA-CTTCAGGGCCTG  1096
      | ||||||||||||| |||| ||||||||||||| || || |||||||||
seq2  CCCTTTTGAGATTTC-AAGA-GTTGAAGATCAGAAGACCTCCAGGGCCTG  1095

seq1  GTGGATGTTGGGCTCAGGGACTGAAAGGCTACCAGTAAAAGCAATGGATA  1146
      |||||||||||||||| |||||| |||||||||||| ||||| |||||  
seq2  GTGGATGTTGGGCTCA-GGACTG-AAGGCTACCAGT-AAAGC-ATGGAAT  1141

seq1  AAACCTCGTGTTGTTAATAAGATTCAGTATAACTTATGAAAGTTTTAATG  1196
      ||||  ||| ||||| |||| || | | ||  ||||||  || ||||| |
seq2  AAACTCCGT-TTGTTTATAA-ATACGGAAT--CTTATG--AGGTTTAAAG  1185

seq1  ATTATCCCAATCACAATGACTGCCT  1221
        ||| || ||||| ||||||||||
seq2  TATATTCCCATCAC-ATGACTGCCT  1209