BAC Information

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BAC

Clone NameB6Ng01-070A07
Chromosome10 (Build37)
Map Location 12,413,777 - 12,489,591
singlet/doubletdoublet
Overlap geneUtrn
Upstream genenone
Downstream geneLOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475, Fuca2, Pex3, Deadc1, Aig1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070A07.bB6Ng01-070A07.g
ACCDH888150DH888151
length1,151668
definitionDH888150|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A07, 5' end.DH888151|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,488,454 - 12,489,591)(12,413,777 - 12,414,444)
sequence
gaattctttctgtagaccaggggatatcattgactcagagattcacctgc
ctttgcttcctgagtgctaggattaaggctgcatgccaccactgcttagc
gttaaagaactcttaaattgtctgaacattatgaaagtaagagaatattt
atttgtgaactttctatttcttcttcataagattaaaggatggtgggtac
aacacaatttacaaaagtaaacctcctttagagtcatggaacatattatt
atgttaagtgtttcaaacacagatgtttaaaattaaattcttttcagcca
agctggtatagtgactgtttataggtagatgtacctagtatagccttgca
cgctggctgtattgtcagctctgtccttctgaagtttgatggtaaaggct
gggacattctgtgtatgtaagcaagtctccttgattaatgactttgtagc
atcgatcagataatgtataaagctggaattggggctgatgactttcttcc
ctgtcctttctgagatgcaggtcacctttcagcaccattaacatcaagaa
tcttcttagtgtccttctatactgtcccctttgagccttagggttgctct
ccaatttcctttatggatctgcaaactctctttctagaactgttatattt
atcacagggatggcctttcagttacaaattttccttctgtcttagttact
tttctattggctgtggcaaaacattgtgaccaaagcaacttataaaagaa
gacattaatttggaacttagttctagatggttagaatccatgaccatcat
ggctggtaccatggtggcaaataggcaggcatggtgctggaataccttac
attcccatctactgactggaagcagagagagctacctgagtgttgcagga
ttttccctgtccaattacattagggtaacaggaggcctgtgattggacag
agaaaagggaggcagagctaagagttgcaggacagagagtgtagagagtg
agaagagaaagaaaatggaggcagaaatgaccagtgtacctttaccaacc
acaaatagttatgatatcagaaagtagaacattggaataaagcttttatc
attatcatggttctgaaatgatttattagcatcttgtaatgagaattatt
g
gaattcccatggtgtggcctcacattctaaactgagcctggagttgggca
cagtcacacattcttgtaatatcagcccttggaaggcagaagcaggtgtg
tctctgtaaatccagggctagcctgctctacagaagaagacctgttctca
aaaaaatgttcttaaaaataaggggaaaaaactgaggatgaaaagaacta
ttacaaaagatgtccacaaggcattaccctataaaatgttggttagaaag
tagaaggtaggactggagagatggctcagtggttaagagcactgactgct
cttccgaaggacctgagttcaaatcccaacaaccacatggtggctcacaa
ccatctgtacagttacagtgtactcacatacataaatcttaaaaaaaaaa
aaacagaaagtagaagatagacgttggagagatggctcagtggttaagag
cacttgctgctcttcccgaggatgcaggttcaattcccagtccccacatg
atggctcacaactcctctgtaactgtaactccagttcaagttcaagaaaa
tccaacactctacatacacagacatacagacagacaaaacaccaaggcac
ataagtaaagtgttttgtaaaagaaaaaggagggggaggagaaggagaga
aggagagaagaagaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_12488454_12489591
seq2: B6Ng01-070A07.b_73_1197 (reverse)

seq1  CAATAAATTCTCAATTAACAAGATGCTAATACAATCATTTCAGAACCAAT  50
      |||| ||||||||  | |||||||||||||| ||||||||||||||||  
seq2  CAAT-AATTCTCA--TTACAAGATGCTAATA-AATCATTTCAGAACCA--  44

seq1  TGATAATGATAAAAGCTTTATTCCAATTGTTCTAACTTTCTGATATCATA  100
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TGATAATGATAAAAGCTTTATTCCAA-TGTTCT-ACTTTCTGATATCATA  92

seq1  ACTATTTGTGGTTGGTTAAAGGTACACTGGTTCATGTCTGCCTCCATTTT  150
      ||||||||||||||| |||||||||||||| |||| |||||||||| |||
seq2  ACTATTTGTGGTTGG-TAAAGGTACACTGG-TCATTTCTGCCTCCA-TTT  139

seq1  TCTTTCTCCTTCTCACTCTCTACACTCTCTGTCCCTGCAACTCTTAGCTC  200
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTTCT-CTTCTCACTCTCTACACTCTCTGT-CCTGCAACTCTTAGCTC  187

seq1  TGCCTCCCTTTTCTCTGTCCAATCACAGGCCTCCTGTTACCCTAATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCTTTTCTCTGTCCAATCACAGGCCTCCTGTTACCCTAATGTAA  237

seq1  TTGGACAGGGAAAATCCTGCAACACTCAGGTAGCTCTCTCTGCTTCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACAGGGAAAATCCTGCAACACTCAGGTAGCTCTCTCTGCTTCCAGT  287

seq1  CAGTAGATGGGAATGTAAGGTATTCCAGCACCATGCCTGCCTATTTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATGGGAATGTAAGGTATTCCAGCACCATGCCTGCCTATTTGCCA  337

seq1  CCATGGTACCAGCCATGATGGTCATGGATTCTAACCATCTAGAACTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTACCAGCCATGATGGTCATGGATTCTAACCATCTAGAACTAAGT  387

seq1  TCCAAATTAATGTCTTCTTTTATAAGTTGCTTTGGTCACAATGTTTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTAATGTCTTCTTTTATAAGTTGCTTTGGTCACAATGTTTTGCC  437

seq1  ACAGCCAATAGAAAAGTAACTAAGACAGAAGGAAAATTTGTAACTGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAATAGAAAAGTAACTAAGACAGAAGGAAAATTTGTAACTGAAAG  487

seq1  GCCATCCCTGTGATAAATATAACAGTTCTAGAAAGAGAGTTTGCAGATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCTGTGATAAATATAACAGTTCTAGAAAGAGAGTTTGCAGATCC  537

seq1  ATAAAGGAAATTGGAGAGCAACCCTAAGGCTCAAAGGGGACAGTATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGAAATTGGAGAGCAACCCTAAGGCTCAAAGGGGACAGTATAGAA  587

seq1  GGACACTAAGAAGATTCTTGATGTTAATGGTGCTGAAAGGTGACCTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTAAGAAGATTCTTGATGTTAATGGTGCTGAAAGGTGACCTGCAT  637

seq1  CTCAGAAAGGACAGGGAAGAAAGTCATCAGCCCCAATTCCAGCTTTATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAGGACAGGGAAGAAAGTCATCAGCCCCAATTCCAGCTTTATAC  687

seq1  ATTATCTGATCGATGCTACAAAGTCATTAATCAAGGAGACTTGCTTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTGATCGATGCTACAAAGTCATTAATCAAGGAGACTTGCTTACAT  737

seq1  ACACAGAATGTCCCAGCCTTTACCATCAAACTTCAGAAGGACAGAGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAATGTCCCAGCCTTTACCATCAAACTTCAGAAGGACAGAGCTGA  787

seq1  CAATACAGCCAGCGTGCAAGGCTATACTAGGTACATCTACCTATAAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGCCAGCGTGCAAGGCTATACTAGGTACATCTACCTATAAACAG  837

seq1  TCACTATACCAGCTTGGCTGAAAAGAATTTAATTTTAAACATCTGTGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATACCAGCTTGGCTGAAAAGAATTTAATTTTAAACATCTGTGTTT  887

seq1  GAAACACTTAACATAATAATATGTTCCATGACTCTAAAGGAGGTTTACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTTAACATAATAATATGTTCCATGACTCTAAAGGAGGTTTACTT  937

seq1  TTGTAAATTGTGTTGTACCCACCATCCTTTAATCTTATGAAGAAGAAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATTGTGTTGTACCCACCATCCTTTAATCTTATGAAGAAGAAATA  987

seq1  GAAAGTTCACAAATAAATATTCTCTTACTTTCATAATGTTCAGACAATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCACAAATAAATATTCTCTTACTTTCATAATGTTCAGACAATTT  1037

seq1  AAGAGTTCTTTAACGCTAAGCAGTGGTGGCATGCAGCCTTAATCCTAGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTCTTTAACGCTAAGCAGTGGTGGCATGCAGCCTTAATCCTAGCA  1087

seq1  CTCAGGAAGCAAAGGCAGGTGAATCTCTGAGTCAATGA  1138
      ||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAGCAAAGGCAGGTGAATCTCTGAGTCAATGA  1125

seq1: chr10_12413777_12414444
seq2: B6Ng01-070A07.g_69_736

seq1  GAATTCCCATGGTGTGGCCTCACATTCTAAACTGAGCCTGGAGTTGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGTGTGGCCTCACATTCTAAACTGAGCCTGGAGTTGGGCA  50

seq1  CAGTCACACATTCTTGTAATATCAGCCCTTGGAAGGCAGAAGCAGGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACACATTCTTGTAATATCAGCCCTTGGAAGGCAGAAGCAGGTGTG  100

seq1  TCTCTGTAAATCCAGGGCTAGCCTGCTCTACAGAAGAAGACCTGTTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAAATCCAGGGCTAGCCTGCTCTACAGAAGAAGACCTGTTCTCA  150

seq1  AAAAAATGTTCTTAAAAATAAGGGGAAAAAACTGAGGATGAAAAGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTCTTAAAAATAAGGGGAAAAAACTGAGGATGAAAAGAACTA  200

seq1  TTACAAAAGATGTCCACAAGGCATTACCCTATAAAATGTTGGTTAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAAGATGTCCACAAGGCATTACCCTATAAAATGTTGGTTAGAAAG  250

seq1  TAGAAGGTAGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTAGGACTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT  300

seq1  CTTCCGAAGGACCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGAAGGACCTGAGTTCAAATCCCAACAACCACATGGTGGCTCACAA  350

seq1  CCATCTGTACAGTTACAGTGTACTCACATACATAAATCTTAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTACAGTTACAGTGTACTCACATACATAAATCTTAAAAAAAAAA  400

seq1  AAACAGAAAGTAGAAGATAGACGTTGGAGAGATGGCTCAGTGGTTAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAGTAGAAGATAGACGTTGGAGAGATGGCTCAGTGGTTAAGAG  450

seq1  CACTTGCTGCTCTTCCCGAGGATGCAGGTTCAATTCCCAGTCCCCACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTGCTCTTCCCGAGGATGCAGGTTCAATTCCCAGTCCCCACATG  500

seq1  ATGGCTCACAACTCCTCTGTAACTGTAACTCCAGTTCAAGTTCAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCACAACTCCTCTGTAACTGTAACTCCAGTTCAAGTTCAAGAAAA  550

seq1  TCCAACACTCTACATACACAGACATACAGACAGACAAAACACCAAGGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACTCTACATACACAGACATACAGACAGACAAAACACCAAGGCAC  600

seq1  ATAAGTAAAGTGTTTTGTAAAAGAAAAAGGAGGGGGAGGAGAAGGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAAGTGTTTTGTAAAAGAAAAAGGAGGGGGAGGAGAAGGAGAGA  650

seq1  AGGAGAGAAGAAGAAGAA  668
      ||||||||||||||||||
seq2  AGGAGAGAAGAAGAAGAA  668