BAC Information

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BAC

Clone NameB6Ng01-070I08
Chromosome10 (Build37)
Map Location 14,848,605 - 14,944,186
singlet/doubletdoublet
Overlap genenone
Upstream geneHivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070I08.bB6Ng01-070I08.g
ACCDH888501DH888502
length9781,126
definitionDH888501|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I08, 5' end.DH888502|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,943,551 - 14,944,186)(14,848,605 - 14,849,738)
sequence
gaattccatcatggaagatggagggcctcacacatttattggcatctggt
ggagactgctaatatgttctctatgctacagtgtttagtgtaatgattat
cttaattttcacttctccctctctcccttcaactcctcctatccctcaac
aatgtataagttaatgacttatgtggttaagaggtcatgtgtatgacctc
tttttaaaatatatacttaatttattattaaattaaatatatttgtgttt
atacttctataaatgtacacatatatatgcataaataaaatctgatgaat
cattgtttcccttgggttcataagatgagggatgaccactaattggataa
cttatcaggagactcatctctggaaaaaaaacttattctaattctcactt
tctcagcagccattaattccctgtagttcatctaaagttgggaccttgtg
aggtttaccctattaacatcagcatgtcaagtggtgttacaatggtgaag
ttcttgttcaggagacggtattaagattccatggatgcagcttgtctctt
gaaaactgaaaacaataacagacctcttggttctctctggttattataat
ctttccatagcctcttgagttgtagtacagtgcatagggtttgtgatgta
aatgtatccattggtttggacacactatggtcagttgttctctgaattct
gttcagttgtagattcctgtaattgtctccctgctctaaaaacaaggagg
cgttttaggcaaaaagtgaaacaaacgctacacttgtataagaacacatt
ttattatatgactataatgagtatatatatatatatatatatatatatac
tataatgagtatatatatatatatatatactataatgagtatatatatat
atatatatatacacatatgcacacatacacacacacacacatatacatac
gtatacctaatatatttagagagagtga
gaattcatatgtgtatgattaaaactcttattactgattgcttataatct
caattcttgtgagagaaggaagactgataattttatgggaggtttcacca
cagaattctacagaaaaagctcactgtgatagacatttttcctacccggt
gtcgaaaaatattgtgtatttttttcagaattgaagaaatatttttttga
gaatacagtcattgaaatgactaaacaagcatgtaaggtaatttaataat
atttactaattaattttaatatgctaggaatgtatactctgtctgcttat
taaaatttatacaaaatagacaacagagatttcaaacattgatcatacag
aattaagtgatagcaataaaacaatttatattaatgtttcttgtgattag
tagatattgtcttcaaaatgtaggatgtaaacatgtctgataaaaccaat
aaagctacactttaaaaatatactttttatgggacagatgaatattttta
ataaggcatacttgttaatggcagaaatgcaagaacatctattttcacat
atttttaaaaaggagttttactgaagaattgtaactctacaagcacttat
ctacttactcatccactcatccactcatgaaaccacggattttatccatt
tgtttaacaagtgtttgttcaaagcctgtcaagtgtacaggatatggtgg
gcacatgaaagagtgacatgtctgagagatcacattagtcacatttcata
tactttcaaaagaccgaaaagtacctgcctgagaacttcgtaaggaaatg
gctaagtgtgttggctgatgtatcagaaagggcttctgctcacctggctc
tccagtatacacaggtggatggggactttgcagatccataaaagactcca
tccagttcttcataatttctcatgttcagacataaaaatggcaaaagaaa
accagtttgtcagtggagtgttacagtgtaaatcagctacactccaagga
agctcctatgctcaggagtagctggtcaatacaaaacaacatgaaacata
ctttatttttatgaggtcctttattgggattttgggttactgtttgtttg
gtttgttgccttgcttcctttttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14943551_14944186
seq2: B6Ng01-070I08.b_46_681 (reverse)

seq1  TATGCACTGTACTACAACTCAAGAGGCTATGGAAAGATTATAATAACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTGTACTACAACTCAAGAGGCTATGGAAAGATTATAATAACCAG  50

seq1  AGAGAACCAAGAGGTCTGTTATTGTTTTCAGTTTTCAAGAGACAAGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAGAGGTCTGTTATTGTTTTCAGTTTTCAAGAGACAAGCTGC  100

seq1  ATCCATGGAATCTTAATACCGTCTCCTGAACAAGAACTTCACCATTGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGGAATCTTAATACCGTCTCCTGAACAAGAACTTCACCATTGTAA  150

seq1  CACCACTTGACATGCTGATGTTAATAGGGTAAACCTCACAAGGTCCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTTGACATGCTGATGTTAATAGGGTAAACCTCACAAGGTCCCAAC  200

seq1  TTTAGATGAACTACAGGGAATTAATGGCTGCTGAGAAAGTGAGAATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGAACTACAGGGAATTAATGGCTGCTGAGAAAGTGAGAATTAGA  250

seq1  ATAAGTTTTTTTTCCAGAGATGAGTCTCCTGATAAGTTATCCAATTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTTTTTTCCAGAGATGAGTCTCCTGATAAGTTATCCAATTAGTG  300

seq1  GTCATCCCTCATCTTATGAACCCAAGGGAAACAATGATTCATCAGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCCTCATCTTATGAACCCAAGGGAAACAATGATTCATCAGATTTT  350

seq1  ATTTATGCATATATATGTGTACATTTATAGAAGTATAAACACAAATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCATATATATGTGTACATTTATAGAAGTATAAACACAAATATAT  400

seq1  TTAATTTAATAATAAATTAAGTATATATTTTAAAAAGAGGTCATACACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAATAATAAATTAAGTATATATTTTAAAAAGAGGTCATACACAT  450

seq1  GACCTCTTAACCACATAAGTCATTAACTTATACATTGTTGAGGGATAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTAACCACATAAGTCATTAACTTATACATTGTTGAGGGATAGGA  500

seq1  GGAGTTGAAGGGAGAGAGGGAGAAGTGAAAATTAAGATAATCATTACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGAAGGGAGAGAGGGAGAAGTGAAAATTAAGATAATCATTACACT  550

seq1  AAACACTGTAGCATAGAGAACATATTAGCAGTCTCCACCAGATGCCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTAGCATAGAGAACATATTAGCAGTCTCCACCAGATGCCAATA  600

seq1  AATGTGTGAGGCCCTCCATCTTCCATGATGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGAGGCCCTCCATCTTCCATGATGGAATTC  636

seq1: chr10_14848605_14849738
seq2: B6Ng01-070I08.g_66_1191

seq1  GAATTCATATGTGTATGATTAAAACTCTTATTACTGATTGCTTATAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGTGTATGATTAAAACTCTTATTACTGATTGCTTATAATCT  50

seq1  CAATTCTTGTGAGAGAAGGAAGACTGATAATTTTATGGGAGGTTTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTGTGAGAGAAGGAAGACTGATAATTTTATGGGAGGTTTCACCA  100

seq1  CAGAATTCTACAGAAAAAGCTCACTGTGATAGACATTTTTCCTACCCGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCTACAGAAAAAGCTCACTGTGATAGACATTTTTCCTACCCGGT  150

seq1  GTCGAAAAATATTGTGTATTTTTTTCAGAATTGAAGAAATATTTTTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAAAATATTGTGTATTTTTTTCAGAATTGAAGAAATATTTTTTTGA  200

seq1  GAATACAGTCATTGAAATGACTAAACAAGCATGTAAGGTAATTTAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGTCATTGAAATGACTAAACAAGCATGTAAGGTAATTTAATAAT  250

seq1  ATTTACTAATTAATTTTAATATGCTAGGAATGTATACTCTGTCTGCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAATTAATTTTAATATGCTAGGAATGTATACTCTGTCTGCTTAT  300

seq1  TAAAATTTATACAAAATAGACAACAGAGATTTCAAACATTGATCATACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTATACAAAATAGACAACAGAGATTTCAAACATTGATCATACAG  350

seq1  AATTAAGTGATAGCAATAAAACAATTTATATTAATGTTTCTTGTGATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGATAGCAATAAAACAATTTATATTAATGTTTCTTGTGATTAG  400

seq1  TAGATATTGTCTTCAAAATGTAGGATGTAAACATGTCTGATAAAACCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTGTCTTCAAAATGTAGGATGTAAACATGTCTGATAAAACCAAT  450

seq1  AAAGCTACACTTTAAAAATATACTTTTTATGGGACAGATGAATATTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACACTTTAAAAATATACTTTTTATGGGACAGATGAATATTTTTA  500

seq1  ATAAGGCATACTTGTTAATGGCAGAAATGCAAGAACATCTATTTTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATACTTGTTAATGGCAGAAATGCAAGAACATCTATTTTCACAT  550

seq1  ATTTTTAAAAAGGAGTTTTACTGAAGAATTGTAACTCTACAAGCACTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAAAGGAGTTTTACTGAAGAATTGTAACTCTACAAGCACTTAT  600

seq1  CTACTTACTCATCCACTCATCCACTCATGAAACCACGGATTTTATCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTACTCATCCACTCATCCACTCATGAAACCACGGATTTTATCCATT  650

seq1  TGTTTAACAAGTGTTTGTTCAAAGCCTGTCAAGTGTACAGGATATGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACAAGTGTTTGTTCAAAGCCTGTCAAGTGTACAGGATATGGTGG  700

seq1  GCACATGAAAGAGTGACATGTCTGAGAGATCACATTAGTCACATTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGAAAGAGTGACATGTCTGAGAGATCACATTAGTCACATTTCATA  750

seq1  TACTTTCAAAAGACCGAAAAGTACCTGCCTGAGAACTTCGTAAGGAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAAAAGACCGAAAAGTACCTGCCTGAGAACTTCGTAAGGAAATG  800

seq1  GCTAAGTGTGTTGGCTGATGTATCAG-AAGGGCTTCTGCTCACCTGGCTC  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTAAGTGTGTTGGCTGATGTATCAGAAAGGGCTTCTGCTCACCTGGCTC  850

seq1  TCCAGTATACACAGGTGGATGGGGACTTTGCAGATCCATAAAAGACTCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTATACACAGGTGGATGGGGACTTTGCAGATCCATAAAAGACTCCA  900

seq1  TCCAGTTCTTCATAATTTCTCATGTTCAGACATAAAAATGGCAAAAGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCTTCATAATTTCTCATGTTCAGACATAAAAATGGCAAAAGAAA  950

seq1  ACCAGTTTTGTCAGTGGAGTGTTACAGTGTAAATCAGCTACACTCCAAGG  999
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAG-TTTGTCAGTGGAGTGTTACAGTGTAAATCAGCTACACTCCAAGG  999

seq1  AAGCCCCTATGCTCAGGAGTAGCTGGTCAATACAAAACAACATGAAACAT  1049
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTATGCTCAGGAGTAGCTGGTCAATACAAAACAACATGAAACAT  1049

seq1  ACTTTATTTTTATGAGGTCCTTTTATTGGGTATTTTTGGTTTAACTGTTT  1099
      |||||||||||||||||||| ||||||||| ||||| ||||  ||||  |
seq2  ACTTTATTTTTATGAGGTCC-TTTATTGGG-ATTTTGGGTT--ACTG--T  1093

seq1  TTGTTTGTTTGTTTGCCTTGTCTTTCCTTTTTTTC  1134
      ||||||| ||  ||||||||   ||||||||||||
seq2  TTGTTTGGTTTGTTGCCTTG--CTTCCTTTTTTTC  1126