BAC Information

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BAC

Clone NameB6Ng01-070P03
Chromosome10 (Build37)
Map Location 29,984,437 - 29,985,542
singlet/doubletsinglet
Overlap genenone
Upstream geneEchdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik
Downstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070P03.bB6Ng01-070P03.g
ACCDH888788DH888789
length1,2461,096
definitionDH888788|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P03, 5' end.DH888789|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaacacagtggtgctggcatccataaatcagtcagctccagaca
ttagaaggaagttacagaacctagaaagactaggtaaaaagtcattgaga
gatttagtagaggttgcagagaaaatgttccacagcagggaaactaaagg
cagtgagtgctaggtgggcaaatcaagttctaacttgaaaataaaaaact
cttttgtgagttgcgaggacttcgaaattcttgggcttgtctgggtttcc
tgtgaactcagggcacaagagcttgacctggcttctgagactgagtatag
actatatgagtcaccacagtccctggacgagatctggatgcctgtcttgc
tgagtttccccatgcatgggcagagactggaggtatggggctggcaaaac
atcggccctctatatttgtagagctcaagccaggagcagacccaatacgg
gtccggcaatatcccataccccaagaagcatggaaggggatcattcccca
tattgggaaactgttggccttgggagtctttaggccataccagttggcct
gggaagaagccaaagtttaggatctactggaagttaatcgcagagtgatg
gacatacactcaacctaacccttatactctgttgagctccctacctccag
atcggaaatggtattctgttctagacctaaaggaagttttcttcagctta
tccttggcccccaaaagccagaaatactttatctttgagtgacatgatct
tgagagaggcattaatggataactaacctggacctgcctacctcaaggtt
acaagaatccagccactttttttgatgaagttttgcctgacgacctgggt
gagtacagagtcaataatccagatataactcttgtatagacgaccttcta
tttgcagcagaaaccaaagaaggaagtaagaaggggaccaagaatctcct
acaggctctggggaacatggaataccgggcatctggcagaagcacggctc
tgtaagactgagtcaccatcttggctacattctgaaggagggccagcagt
ggtcttccacagcagaaaaggggctgttctcagcatacccccactcttca
tcgagcttagaaagcaagagagttctgggatctgcagctttcgactctga
tcccagtctgaatctaacctcttatatagaagccacaggcagactgtgga
cttgaacctaagcctggaattaggcaggccattggtgcagatctcg
gaattcagaattatttagaaatctttgtattaaacaaaatgagccatact
caaaaaataaatattgtgaaatatatataattgcatgaaatatatgcaat
atgtttgatatatgatttatatatatatgtgtgtgtatgtgcatatatat
acatacatatatatatatatatatatatatatatatatatatatatatat
acacacatatgatcacctgaaagtaaaagtgattctgggtaaataaagtg
gaagagtggaagggatgaggagaaagagaaaagatatttcatgctcaaaa
tattgtaccaatgtatcttcatgatatccatctctatatgcaataagcat
gtctaattaaacatcatatacgtagaagaaaacaggtagtggatttttaa
ataacaaaatgtgaagtggacttgagcatccatgttcccaagaaaatagg
aatcacagatgtcccttctaagaaccaaattctaagaacgacaacgcatc
acccaaaacgtgcctgcacttgtatggtccggagagatgagtgggccctg
gaggcgaatgtgttcttcaacatagacagaggttatgtaacattgagaaa
acaattctctaaatgttaatggctacagggtcggcttcagtatgctagaa
tttcacactaggcagtgttttacaaccaggaatgaagttcttgctgtaac
ccaataagttataatatgccaagcagagtttcagttgcaggtggtcatca
taaacttggcttcctctctgatagtcttataggagattggctgttgagtg
ctgaggggtggaaagagtaaaggtttatatattacaatgagttcactccc
aaagataatttattaagtactactatgttccagaaagtagattcagttgt
aaaccttcataaacaggtgatatcaatatcatctgttcacttaaccacaa
gcagagttttctgccattgtgtagaagtgtacctctatgtgcactacatt
atgtttccttatatgcatgtcaacatttctgagatgtcctaagtactagg
gcctgcctgagaacttgatcaccatctaaagatcattccaaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29984437_29985542
seq2: B6Ng01-070P03.g_67_1162

seq1  GAATTCAGAATTATTTAGAAATCTTTGTATTAAACAAAATGAGCCATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATTATTTAGAAATCTTTGTATTAAACAAAATGAGCCATACT  50

seq1  CAAAAAATAAATATTGTGAAATATATATAATTGCATGAAATATATGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATAAATATTGTGAAATATATATAATTGCATGAAATATATGCAAT  100

seq1  ATGTTTGATATATGATTTATATATATATGTGTGTGTATGTGCATATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGATATATGATTTATATATATATGTGTGTGTATGTGCATATATAT  150

seq1  ACATAC----ATATATATATATATATATATATATATATATATATATATAT  196
      ||||||    ||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATATATATATATATATATATATATATATATATATATATATATAT  200

seq1  ACACACATATGATCACCTGAAAGTAAAAGTGATTCTGGGTAAATAAAGTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATGATCACCTGAAAGTAAAAGTGATTCTGGGTAAATAAAGTG  250

seq1  GAAGAGTGGAAGGGATGAGGAGAAAGAGAAAAGATATTTCATGCTCAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGGAAGGGATGAGGAGAAAGAGAAAAGATATTTCATGCTCAAAA  300

seq1  TATTGTACCAATGTATCTTCATGATATCCATCTCTATATGCAATAAGCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTACCAATGTATCTTCATGATATCCATCTCTATATGCAATAAGCAT  350

seq1  GTCTAATTAAACATCATATACGTAGAAGAAAACAGGTAGTGGATTTTTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATTAAACATCATATACGTAGAAGAAAACAGGTAGTGGATTTTTAA  400

seq1  ATAACAAAATGTGAAGTGGACTTGAGCATCCATGTTCCCAAGAAAATAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAATGTGAAGTGGACTTGAGCATCCATGTTCCCAAGAAAATAGG  450

seq1  AATCACAGATGTCCCTTCTAAGAACCAAATTCTAAGAACGACAACGCATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGATGTCCCTTCTAAGAACCAAATTCTAAGAACGACAACGCATC  500

seq1  ACCCAAAACGTGCCTGCACTTGTATGGTCCGGAGAGATGAGTGGGCCCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAACGTGCCTGCACTTGTATGGTCCGGAGAGATGAGTGGGCCCTG  550

seq1  GAGGCGAATGTGTTCTTCAACATAGACAGAGGTTATGTAACATTGAGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAATGTGTTCTTCAACATAGACAGAGGTTATGTAACATTGAGAAA  600

seq1  ACAATTCTCTAAATGTTAATGGCTACAGGGTCGGCTTCAGTATGCTAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCTAAATGTTAATGGCTACAGGGTCGGCTTCAGTATGCTAGAA  650

seq1  TTTCACACTAGGCAGTGTTTTACAACCAGGAATGAAGTTCTTGCTGTAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACTAGGCAGTGTTTTACAACCAGGAATGAAGTTCTTGCTGTAAC  700

seq1  CCAATAAGTTATAATATGCCAAGCAGAGTTTCAGTTGCAGGTGGTCATCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAGTTATAATATGCCAAGCAGAGTTTCAGTTGCAGGTGGTCATCA  750

seq1  TAAACTTGGCTTCCTCTCTGATAGTCTTATAGGAGATTGGCTGTTGAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGGCTTCCTCTCTGATAGTCTTATAGGAGATTGGCTGTTGAGTG  800

seq1  CTGAGGGGTGGAAAGAGTAAAGGTTTATATATTACAATGAGTTCACTCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGGTGGAAAGAGTAAAGGTTTATATATTACAATGAGTTCACTCCC  850

seq1  AAAGATAATTTATTAAGTACCTACTATGTTCCAGAAAGTAGATTCAGTTG  896
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAGATAATTTATTAAGTA-CTACTATGTTCCAGAAAGTAGATTCAGTTG  899

seq1  TAAACCTTCAATAAACAGGTGATATCAATATCACCTGTTCCACTTAACCA  946
      ||||||||| ||||||||||||||||||||||| ||||| ||||||||||
seq2  TAAACCTTC-ATAAACAGGTGATATCAATATCATCTGTT-CACTTAACCA  947

seq1  CAAGCAGAGTTTTCTGCCATTGTGTAGAAGTGTACCTCTTATGTGCACTA  996
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAGCAGAGTTTTCTGCCATTGTGTAGAAGTGTACCTC-TATGTGCACTA  996

seq1  CATTATGTTTCCTTATATTGCATGTCAACATTTCTGAAGAGTGTTCCTTA  1046
      ||||||||||||||||| |||||||||||||||||| ||| || ||||  
seq2  CATTATGTTTCCTTATA-TGCATGTCAACATTTCTG-AGA-TG-TCCT--  1040

seq1  GAGTACTAGGGCCTGCATGAG-ACATGATTCACCATCATAAAGAAATCAT  1095
       ||||||||||||||| |||| || ||| |||||||| |||||  |||||
seq2  AAGTACTAGGGCCTGCCTGAGAACTTGA-TCACCATC-TAAAG--ATCAT  1086

seq1  TCACAAACACA  1106
      || ||||||||
seq2  TC-CAAACACA  1096