BAC Information

Click to search

BAC

Clone NameB6Ng01-071C06
Chromosome10 (Build37)
Map Location 11,146,926 - 11,147,471
singlet/doubletsinglet
Overlap geneEpm2a
Upstream gene9130014G24Rik, Rab32, EG382450, Grm1, Shprh, Fbxo30
Downstream geneEG666732, LOC100039343, Utrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071C06.bB6Ng01-071C06.g
ACCDH888923DH888924
length5401,097
definitionDH888923|Mus musculus domesticus DNA, BAC clone: B6Ng01-071C06, 5' end.DH888924|Mus musculus domesticus DNA, BAC clone: B6Ng01-071C06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agcatagcgacacactattggcttattcaaacatcagcagaaaaattaca
tgtacatgcagggtgtcaaagttctgtgagttgttgactcagttcagata
gccctgttaggtcctcacattcctctttatctttaaggttacgctgttcc
caggaatgttttaactatggggcatacccaggtttgtttttctttattct
cagccccaggcagcctctaggctcacaaacaaccagcaatttctaagttc
tttatatgacttacaggtcttgaaatttcatctttctttcacattgatca
aggaaattcaataaaatataattacattgccaggtggtagtggctcatgc
ctttaatcctaatactcagaaggcagagacaggagaatgtttgcgtttca
ggccatcctggtctacagagtgagttccagagcagccagggctacacaga
aaagcctgtctcaaaaacaaataaacaaaaaaactatatacattggactt
atggtagatcagtgtgtgaatgtgtgtgtgtgtgtgtgcg
gaattctttgtttggctctgtaccccatttttaatggggttatttgattt
tctggagtccagattcttgaattctttgtatataatggatattagtcccc
tatcagatataggattggtaaatatcctttcccaatctgtgggtggcctt
tttgtcttattgacagtgttttttgacttacagaagatttgaagttttat
gaggtcccatttgttgattcttgatattacagcacaagccaaagctgttc
tgttcaggaatttttctcgtgtgcccatatctttgaggcttttccccact
ttctcctctataagtttcactgtctctgattttatgtggagttctttgat
ccacatagacttgagctttgtacaaagaaataagaatggatcaattcacg
ttcttctacatgataaccaccagttgagccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttatcaaagatcaagtg
gccataggtgcgtgggttcatttctgggtctttaattctattccattgat
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttagatcaggcatgatgattccactaagattctttta
tccttgagaagagtttttgctatcctaggttttttgttattctagatgaa
tttgcaaattgccctttctaactcagtgaagaattgaggtggaattttga
tggggattgaattgaatctgtagaatgctttcagcaggatagccattttg
attatattaatcctgccaatccatgagcatgggagatgtttccatcttct
gaggtcttcttctatttctttcttcagagacttgaagttcttatcaaaca
aatctttacttccttatttaaagtcacaccaaggtattttatattatttg
tgactatgtgaagggtatgtttctgtaatttctttctcacctgtttatcc
tttgtgtagagaaagccattgatttttttgagtaattttatacgcagcta
ctgcacctgagctgttttacaggtttaggagtctctgggattttacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11146926_11147471
seq2: B6Ng01-071C06.b_46_591

seq1  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50

seq1  ATTACATGTACATGCAGGGTGTCAAAGTTCTGTGAGTTGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACATGCAGGGTGTCAAAGTTCTGTGAGTTGTTGACTCAGTT  100

seq1  CAGATAGCCCTGTTAGGTCCTCACATTCCTCTTTATCTTTAAGGTTACGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGCCCTGTTAGGTCCTCACATTCCTCTTTATCTTTAAGGTTACGC  150

seq1  TGTTCCCAGGAATGTTTTAACTATGGGGCATACCCAGGTTTGTTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGGAATGTTTTAACTATGGGGCATACCCAGGTTTGTTTTTCTT  200

seq1  TATTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCT  250

seq1  AAGTTCTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCACAT  300

seq1  TGATCAAGGAAATTCAATAAAATATAATTACATTGCCAGGTGGTAGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAGGAAATTCAATAAAATATAATTACATTGCCAGGTGGTAGTGGC  350

seq1  TCATGCCTTTAATCCTAATACTCAGAAGGCAGAGACAGGAGAATGTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTTTAATCCTAATACTCAGAAGGCAGAGACAGGAGAATGTTTGC  400

seq1  GTTTCAGGCCATCCTGGTCTACAGAGTGAGTTCCAGAGCAGCCAGGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGCCATCCTGGTCTACAGAGTGAGTTCCAGAGCAGCCAGGGCTA  450

seq1  CACAGAAAAGCCTGTCTCAAAAACAAATAAACAAAAAAACTATATACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAGCCTGTCTCAAAAACAAATAAACAAAAAAACTATATACATT  500

seq1  GGACTTATGGTAGATCAGTGTGTGAATGTGTGTGTGTGTGTGTGTG  546
      |||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGACTTATGGTAGATCAGTGTGTGAATGTGTGTGTGTGTGTGTGCG  546