BAC Information

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BAC

Clone NameB6Ng01-071C10
Chromosome10 (Build37)
Map Location 100,328,077 - 100,329,291
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071C10.bB6Ng01-071C10.g
ACCDH888931DH888932
length1,1941,185
definitionDH888931|Mus musculus domesticus DNA, BAC clone: B6Ng01-071C10, 5' end.DH888932|Mus musculus domesticus DNA, BAC clone: B6Ng01-071C10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttatctggagtatgggtataatttatgaaactcacattttt
ggatccctaatcgtcactccaaagaatcaagggacaatcattccaagagt
gtcaactgaggctctgcagtggtgaagtgcccaagtgtttgtcagggtag
tgtgtttgggcaatgacttgaaaccacacaaatagtctccaccaaatttt
gactttctagtttataagtaaatatttcttaccagaccaggaaaacttta
aagaatgtctctgaatgagagggaccacaagggcaaaatacacagcatct
gatggctacttttacctggataaatagaaaaccctgggtgaaagtctata
agcctttgtcattaactacactgaattctgacaatacgagggaagatatg
ggtttatagcctatgttctgtgagtgtatgtaaaggcaatatcctaactc
taagatagcagaggagaatcttaaaagcatagatgcagatcataattgag
tttctttatttgaggctcagatttgctggctttaatctaatttaaaatcc
tgagcagcagcccaaagtctgtgatatcatctaatttattaggtaagaaa
cagcccaccatagtagctacacctctctgtcacctttgttcttaagtttt
ctagggtctagaggaaatgaagaaagtgcaacttgggacagcagaggggt
ggggaaaaaactcgcttgtttcctttctgttcctttctctgcatactaat
aaagtaattattctcttctcgggttttctgttgagattttttgcagtgtc
tccttttcctagtgagagacacttgaggtgaaaaagaaaagctcattaaa
aatggtttgttttattgtcagatgtgatttaaagtggtgtttctttattc
actcagctgctcgctccaatctgaaccctccaccactgtttccacagcta
ccttctgacacgttgctagtgacatgtgctagtgatgaacatttttcctc
agtaactattgtaactgcagttgctcttaattcagaaagggttttggtag
ctttgacgacttgtcttgctaactttacctatttttctatggtgtacttt
aataggaagactttatgctacttcacgtactgggatgccttactttaaat
tctatcattaggttaataaaggatggcattgtcaaagctgcaaa
gaattcagcaggcttcttgtatgttctcagggaactctttatttaggtta
gggaagttttcttctatctttttttttttttaagatatttactggtcctt
taagttgaaaatcttcattcttatctatacctattatccttagatttggt
cttctcattgtgtcctggatttcctggatgttttgagttaggatgtttat
gccttttgcattctcattgattgttgtgtccatgctttctatggaatctt
ctgcacctaagagcctctcttctatctcttatattctgttggtgatgctt
gcatctatggctcctgatttctttcctaggatttctatctccagagttgt
cttcctttgtgatttcttttttgtttctacttccatttttagatcctgga
tggttttgctcaattccttcatttgttttttcctataattctttaaggaa
ttattttgtgtttcttctttaaggtcttctacctctttaatttgtgttgt
cctgtatttcttttagggagttattaatatctgtcttaaaatcatctacc
agaatcatgagatattattttaagttcaaatcttgcttttctggtgtgtt
ggggtatccaggactcactgtggtgggattactaggttctgatgatgctg
agtagtcttggtttctgttggtaagattcttgtgtttgccttttaccatc
tggtaatctctggtgttagatgttcttgctgtctctggctgaagcttgtt
cctcctgtgagtctgtaagcctgtgttagtagtcctgggacaccagctct
ctcctggcagcaccagggcactgagggctgtgtaaaatccccacctcctg
gctgcatgcagatgtaggcctgtctaagctactctgctgcttctgcagca
tgtgcactcttgagtggacctgtcttaaagagtcactggagagaaatagt
gatcttacctgagtccccgggtcagactcttctggagccaagctctctgt
ggcagaaaagtgtacagagactaagaatcagctcacttctgctgcagatg
caaacttgtaggagcctgtcagctgctctgctgctactgtgccgtggctc
tcctagtgacttgactagagaaacctgagaaaaattcagcttattcttga
taacaaataaaacctggctccattggaggttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100328077_100329291
seq2: B6Ng01-071C10.b_45_1238 (reverse)

seq1  TTTGCAGCTCTCTGAGACAAATGCAATCCTTTTATTAAACCTAATTGATA  50
      ||||||||| |    ||| ||||| |||| |||||| ||||||| |||||
seq2  TTTGCAGCTTT----GAC-AATGCCATCC-TTTATT-AACCTAA-TGATA  42

seq1  AGGAATTTTAAAGTAA-GCAATCCAGTACGTGAAGTTAGCATAAAAGTCT  99
        ||| |||||||||| |||  ||||||||||||| |||||| |||||||
seq2  --GAA-TTTAAAGTAAGGCATCCCAGTACGTGAAG-TAGCAT-AAAGTCT  87

seq1  TCCTATTTAAAAGTACACCATAGAAAAATAAGGTAAAAGTTAGCAAAGAC  149
      |||||||  |||||||||||||||||||| |||| ||||||||| |||||
seq2  TCCTATT--AAAGTACACCATAGAAAAAT-AGGT-AAAGTTAGC-AAGAC  132

seq1  AAGTCGTCAAAGCTACCAAAAACCCTTTCTGAATTAAGAGCAACTGCAGT  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGTCGTCAAAGCTACC-AAAACCCTTTCTGAATTAAGAGCAACTGCAGT  181

seq1  TACAATAGTTACTGAGGAAAAATGTTCATCACCTAGCAACATGTCACCTA  249
      ||||||||||||||||||||||||||||||| ||||| |||||||| |||
seq2  TACAATAGTTACTGAGGAAAAATGTTCATCA-CTAGC-ACATGTCA-CTA  228

seq1  GCAACGTGTCAGAAGGTAGCTGTGGAAACAGTGGTGGAGGGTTCAGATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGTGTCAGAAGGTAGCTGTGGAAACAGTGGTGGAGGGTTCAGATTG  278

seq1  GAGCGAGCAGCTGAGTGAATAAAGAAACACCACTTTAAATCACATCTGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGCAGCTGAGTGAATAAAGAAACACCACTTTAAATCACATCTGAC  328

seq1  AATAAAACAAACCATTTTTAATGAGCTTTTCTTTTTCACCTCAAGTGTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAAACCATTTTTAATGAGCTTTTCTTTTTCACCTCAAGTGTCT  378

seq1  CTCACTAGGAAAAGGAGACACTGCAAAAAATCTCAACAGAAAACCCGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAGGAAAAGGAGACACTGCAAAAAATCTCAACAGAAAACCCGAGA  428

seq1  AGAGAATAATTACTTTATTAGTATGCAGAGAAAGGAACAGAAAGGAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAATTACTTTATTAGTATGCAGAGAAAGGAACAGAAAGGAAACA  478

seq1  AGCGAGTTTTTTCCCCACCCCTCTGCTGTCCCAAGTTGCACTTTCTTCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGTTTTTTCCCCACCCCTCTGCTGTCCCAAGTTGCACTTTCTTCAT  528

seq1  TTCCTCTAGACCCTAGAAAACTTAAGAACAAAGGTGACAGAGAGGTGTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAGACCCTAGAAAACTTAAGAACAAAGGTGACAGAGAGGTGTAG  578

seq1  CTACTATGGTGGGCTGTTTCTTACCTAATAAATTAGATGATATCACAGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATGGTGGGCTGTTTCTTACCTAATAAATTAGATGATATCACAGAC  628

seq1  TTTGGGCTGCTGCTCAGGATTTTAAATTAGATTAAAGCCAGCAAATCTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTGCTGCTCAGGATTTTAAATTAGATTAAAGCCAGCAAATCTGA  678

seq1  GCCTCAAATAAAGAAACTCAATTATGATCTGCATCTATGCTTTTAAGATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAATAAAGAAACTCAATTATGATCTGCATCTATGCTTTTAAGATT  728

seq1  CTCCTCTGCTATCTTAGAGTTAGGATATTGCCTTTACATACACTCACAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGCTATCTTAGAGTTAGGATATTGCCTTTACATACACTCACAGA  778

seq1  ACATAGGCTATAAACCCATATCTTCCCTCGTATTGTCAGAATTCAGTGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGCTATAAACCCATATCTTCCCTCGTATTGTCAGAATTCAGTGTA  828

seq1  GTTAATGACAAAGGCTTATAGACTTTCACCCAGGGTTTTCTATTTATCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGACAAAGGCTTATAGACTTTCACCCAGGGTTTTCTATTTATCCA  878

seq1  GGTAAAAGTAGCCATCAGATGCTGTGTATTTTGCCCTTGTGGTCCCTCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGTAGCCATCAGATGCTGTGTATTTTGCCCTTGTGGTCCCTCTC  928

seq1  ATTCAGAGACATTCTTTAAAGTTTTCCTGGTCTGGTAAGAAATATTTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGACATTCTTTAAAGTTTTCCTGGTCTGGTAAGAAATATTTACT  978

seq1  TATAAACTAGAAAGTCAAAATTTGGTGGAGACTATTTGTGTGGTTTCAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTAGAAAGTCAAAATTTGGTGGAGACTATTTGTGTGGTTTCAAG  1028

seq1  TCATTGCCCAAACACACTACCCTGACAAACACTTGGGCACTTCACCACTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCCCAAACACACTACCCTGACAAACACTTGGGCACTTCACCACTG  1078

seq1  CAGAGCCTCAGTTGACACTCTTGGAATGATTGTCCCTTGATTCTTTGGAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTCAGTTGACACTCTTGGAATGATTGTCCCTTGATTCTTTGGAG  1128

seq1  TGACGATTAGGGATCCAAAAATGTGAGTTTCATAAATTATACCCATACTC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGATTAGGGATCCAAAAATGTGAGTTTCATAAATTATACCCATACTC  1178

seq1  CAGATAAAGAGAATTC  1215
      ||||||||||||||||
seq2  CAGATAAAGAGAATTC  1194