BAC Information

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BAC

Clone NameB6Ng01-071G16
Chromosome10 (Build37)
Map Location 109,757,592 - 109,880,576
singlet/doubletdoublet
Overlap geneLOC100042506
Upstream geneNav3, LOC100042497, LOC100042502
Downstream geneLOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071G16.bB6Ng01-071G16.g
ACCDH889123DH889124
length1,0091,118
definitionDH889123|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G16, 5' end.DH889124|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,880,039 - 109,880,576)(109,757,592 - 109,758,726)
sequence
gaattccaggagtttctagaagccacagcaaagccagagagtaggttcct
acccagatacttcagtgagaattatttctgctgatgagctgaattttagt
ttagtgaggctgttgggcctgtgacctccggcactggaagataaaagcat
tgacatcctccagccactaagattataataatttattatcggaacaacag
aaagtgaatacagtagaattcaggccatggctttatgtttgcttcaggtc
aggttataaaaaccctttggaatttcagagcttcaggatatgaactgcgt
ctggggattataggcctgtacagagagagggctgtttcccctccccagat
cggagtctctaaacctgtctagaattgagatatagttcatttcatccttg
gccttgtgatcctcctgccttaggctcccacatgctgggattacaggcat
atgccactattgtggtaaatctccaacccaaatatgccccggcaatgaaa
acctgactcaattaatatgaatacatgttgtgtacctagattgggcagat
ctaccactacactaccatcttccacatcgatgagaccccttagaacttgc
ggtttcttcaggccttgtgcttttgctctgcttttttcttcttcttcctc
ctcctctgagtcctctctctctcccactttctcctccttctctctctcat
ctgcccaatcatcagctctcctttattttacaaattaaggtgggaagcag
gtttacaggaaatcacctgagttctggctgactcattccttgttcacagc
ccctcacaaatataattagccccagggctgtctgcaatgtgccacaattc
tcacaccttggtattttttaactgtgaccttactgtggtttgattttcac
ttgtgcttcgaagagttcctgagaagaaagccatttagttaaatatcttg
agatgttttatatttatatcttgttgttgttgcctttgtcatatggggtc
tgtgtgtgt
gaattccttcagtgtcagaattaaaatctttgacttggtaagctagaaaa
accatctcactatggaaccaaagcctagagatgttattgcaaaaagataa
ctaaccaatctaggagaagttataattgtcacctcacggtcaaattatga
ggttgattgagctcgttaatcttgcattgaaatctatctaaacctaaaat
taaatgaaaggggaatttgatgagaagaagtacagaggtatctctgcagt
tattgtggtttccaaccatgaacagcttcagggatgctattttggagacg
tgtcgtagcttggccctctttcccacagctctttaagttgtcaggttaag
tttgttcctgaatagcacatgaccatactaggcaatttaaacacaaatat
catgaaaaatcatagactaaatgcaatgaacacagtactatttaatgata
aatatgacttcttcccttctgatggacagagggcttaagattccaaagat
ggtggttgggatacagtaccatgtgatggaaggatgctggagtcctatat
catcaccaagtgaaggggagtaatccgggtaacgttctggtttccaattt
tacttagctatcaatactatcacgcattttaagactccaaatctgtcaaa
acgcagagaagctattttggccctagcaacgaaacctgaaactcattaaa
cactaaatgcataccaggcactcctggatgcttctcaaaaattatcttct
atagtcctcacatgagccttctgagcctcagaatccccataagcaatcca
aaggtagagaaatgcagtagtcctttacaaagaggaggcagtttgctagg
ctaagcaaaaaccctaggagtagagtggtggttctcaaccttcctaaggc
tttaatatagttccttgtgttacggtaagagccaccataaaatcattttg
ctgttactttataactgtaatttacctgtagtatcatatattagtatatt
tatgtagagtataatatctgatttgcaaatatctgatatgtgacctctgt
gaaaggccttttgacctacaaaggatcgtacccacagtgagaccaagaaa
gaagaatgatttcactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109880039_109880576
seq2: B6Ng01-071G16.b_514_1049 (reverse)

seq1  ACACACACCAGACCCATAATGACAAAGGCAACAACAACAAGATATAAATA  50
      ||||||| |||||||   ||||||||||||||||||||||||||||||||
seq2  ACACACA-CAGACCCCATATGACAAAGGCAACAACAACAAGATATAAATA  49

seq1  TAAAAACATCTCAAGATATTTAACTAAATGGCTTTCTTCTCAGGAACTCT  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAAACATCTCAAGATATTTAACTAAATGGCTTTCTTCTCAGGAACTCT  98

seq1  TCGAAGCACAAGTGAAAATCAAACCACAGTAAGGTCACAGTTAAAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGCACAAGTGAAAATCAAACCACAGTAAGGTCACAGTTAAAAAATA  148

seq1  CCAAGGTGTGAGAATTGTGGCACATTGCAGACAGCCCTGGGGCTAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTGTGAGAATTGTGGCACATTGCAGACAGCCCTGGGGCTAATTAT  198

seq1  ATTTGTGAGGGGCTGTGAACAAGGAATGAGTCAGCCAGAACTCAGGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGAGGGGCTGTGAACAAGGAATGAGTCAGCCAGAACTCAGGTGAT  248

seq1  TTCCTGTAAACCTGCTTCCCACCTTAATTTGTAAAATAAAGGAGAGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAAACCTGCTTCCCACCTTAATTTGTAAAATAAAGGAGAGCTGA  298

seq1  TGATTGGGCAGATGAGAGAGAGAAGGAGGAGAAAGTGGGAGAGAGAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGCAGATGAGAGAGAGAAGGAGGAGAAAGTGGGAGAGAGAGAGG  348

seq1  ACTCAGAGGAGGAGGAAGAAGAAGAAAAAAGCAGAGCAAAAGCACAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGGAGGAGGAAGAAGAAGAAAAAAGCAGAGCAAAAGCACAAGGC  398

seq1  CTGAAGAAACCGCAAGTTCTAAGGGGTCTCATCGATGTGGAAGATGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAACCGCAAGTTCTAAGGGGTCTCATCGATGTGGAAGATGGTAG  448

seq1  TGTAGTGGTAGATCTGCCCAATCTAGGTACACAACATGTATTCATATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGGTAGATCTGCCCAATCTAGGTACACAACATGTATTCATATTAA  498

seq1  TTGAGTCAGGTTTTCATTGCCGGGGCATATTTGGGTTG  538
      ||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCAGGTTTTCATTGCCGGGGCATATTTGGGTTG  536

seq1: chr10_109757592_109758726
seq2: B6Ng01-071G16.g_64_1181

seq1  GAATTCCTTCAGTGTCAGAATTAAAATCTTTGACTTGGTAAGCTAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAGTGTCAGAATTAAAATCTTTGACTTGGTAAGCTAGAAAA  50

seq1  ACCATCTCACTATGGAACCAAAGCCTAGAGATGTTATTGCAAAAAGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCACTATGGAACCAAAGCCTAGAGATGTTATTGCAAAAAGATAA  100

seq1  CTAACCAATCTAGGAGAAGTTATAATTGTCACCTCACGGTCAAATTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAATCTAGGAGAAGTTATAATTGTCACCTCACGGTCAAATTATGA  150

seq1  GGTTGATTGAGCTCGTTAATCTTGCATTGAAATCTATCTAAACCTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTGAGCTCGTTAATCTTGCATTGAAATCTATCTAAACCTAAAAT  200

seq1  TAAATGAAAGGGGAATTTGATGAGAAGAAGTACAGAGGTATCTCTGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAAGGGGAATTTGATGAGAAGAAGTACAGAGGTATCTCTGCAGT  250

seq1  TATTGTGGTTTCCAACCATGAACAGCTTCAGGGATGCTATTTTGGAGACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGTTTCCAACCATGAACAGCTTCAGGGATGCTATTTTGGAGACG  300

seq1  TGTCGTAGCTTGGCCCTCTTTCCCACAGCTCTTTAAGTTGTCAGGTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTAGCTTGGCCCTCTTTCCCACAGCTCTTTAAGTTGTCAGGTTAAG  350

seq1  TTTGTTCCTGAATAGCACATGACCATACTAGGCAATTTAAACACAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCTGAATAGCACATGACCATACTAGGCAATTTAAACACAAATAT  400

seq1  CATGAAAAATCATAGACTAAATGCAATGAACACAGTACTATTTAATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAATCATAGACTAAATGCAATGAACACAGTACTATTTAATGATA  450

seq1  AATATGACTTCTTCCCTTCTGATGGACAGAGGGCTTAAGATTCCAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGACTTCTTCCCTTCTGATGGACAGAGGGCTTAAGATTCCAAAGAT  500

seq1  GGTGGTTGGGATACAGTACCATGTGATGGAAGGATGCTGGAGTCCTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGGGATACAGTACCATGTGATGGAAGGATGCTGGAGTCCTATAT  550

seq1  CATCACCAAGTGAAGGGGAGTAATCCGGGTAACGTTCTGGTTTCCAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCAAGTGAAGGGGAGTAATCCGGGTAACGTTCTGGTTTCCAATTT  600

seq1  TACTTAGCTATCAATACTATCACGCATTTTAAGACTCCAAATCTGTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGCTATCAATACTATCACGCATTTTAAGACTCCAAATCTGTCAAA  650

seq1  ACGCAGAGAAGCTATTTTGGCCCTAGCAACGAAACCTGAAACTCATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGAGAAGCTATTTTGGCCCTAGCAACGAAACCTGAAACTCATTAAA  700

seq1  CACTAAATGCATACCAGGCACTCCTGGATGCTTCTCAAAAATTATCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAATGCATACCAGGCACTCCTGGATGCTTCTCAAAAATTATCTTCT  750

seq1  ATAGTCCTCACATGAGCCTTCTGAGCCTCAGAATCCCCATAAGCAATCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCTCACATGAGCCTTCTGAGCCTCAGAATCCCCATAAGCAATCCA  800

seq1  AAGGTAGAGAAATGCAGTAGTCCTTTACAAAGAGGAGGCAGTTTGCTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGAGAAATGCAGTAGTCCTTTACAAAGAGGAGGCAGTTTGCTAGG  850

seq1  CTAAGCAAAAACCCTAGGAGTAGAGTGGTGGTTCTCAACCTTCCTAAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAAAAACCCTAGGAGTAGAGTGGTGGTTCTCAACCTTCCTAAGGC  900

seq1  TTTAATATAGTTCCTTGTGTTACGGTAAGAGCCACCATAAAATCATTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATAGTTCCTTGTGTTACGGTAAGAGCCACCATAAAATCATTTTG  950

seq1  CTGTTACTTTATAACTGTAATTTACCTGTTAGTAATCATAATATTAGTAT  1000
      |||||||||||||||||||||||||||| |||| ||||| ||||||||||
seq2  CTGTTACTTTATAACTGTAATTTACCTG-TAGT-ATCAT-ATATTAGTAT  997

seq1  ATTTATGTAGAAGTATAAATATCTGATATGCAAAATATCTGATATGTGAC  1050
      |||||||||| ||||| |||||||||| ||| ||||||||||||||||||
seq2  ATTTATGTAG-AGTAT-AATATCTGATTTGC-AAATATCTGATATGTGAC  1044

seq1  CTCTGTGAAAGGGCCTTTTGACCTACAAAGGGATCGTAACCCACAGGTTG  1100
      |||||||||| |||||||||||||||||| ||||||| ||||||||  ||
seq2  CTCTGTGAAA-GGCCTTTTGACCTACAAA-GGATCGT-ACCCACAG--TG  1089

seq1  AGAACCAAAGAAAGAAAGAATGGAATTTCAACTGA  1135
      |||  | ||||||| |||||||  ||||| |||||
seq2  AGA--CCAAGAAAG-AAGAATG--ATTTC-ACTGA  1118