BAC Information

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BAC

Clone NameB6Ng01-072D02
Chromosome10 (Build37)
Map Location 57,094,501 - 57,250,825
singlet/doubletdoublet
Overlap geneLOC668363, Hsf2, Serinc1
Upstream geneGja1, EG668347, LOC100042622, LOC668355, LOC100042628, EG629739, LOC629742
Downstream geneLOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072D02.bB6Ng01-072D02.g
ACCDH889677DH889678
length1,192210
definitionDH889677|Mus musculus domesticus DNA, BAC clone: B6Ng01-072D02, 5' end.DH889678|Mus musculus domesticus DNA, BAC clone: B6Ng01-072D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,249,630 - 57,250,825)(57,094,501 - 57,094,710)
sequence
gaattctccattttattattttccagtttagttttgagcactgttgttgt
tgttgttctcttttgtctttttaagttttaaggaatttttgtatatgtgt
gttttaagtcaaaatagctttggagaacaccattggatacattgcatgac
tacatctacaacttagattgacacttttgttcacgaaaggaatgtctttg
atgaaactggtgctgtcttgccagcatcattttattatacctaggtacac
tgaagaggttgcaacaatagcagggttaggtatgactggaactagggggc
aagttgttcatcatgatgcacctttcttctgactcatctggaggttcatg
gtgtgaagtttgaatcataccttttgttcagtgtgctccttttaactatt
agatttcagtgtatatctgtaagtagaatttgtattaggaggtacacctc
catcttttccaactcccaagtttaatatgcttacttgcttgggaactttg
atgaggtgaaattttattcaactgttcctctggttgaaataattaagtat
gtcaagtaatccataatttaaaggctttcattttttaacagatttttgaa
gactcagtcgagtttagtaacactttgcttctggttcataaagtaactat
aaaacattactcctgaactacaaaaatgtatgaaagaaaatttacatgtg
agcatctctggaccttttatctaactgtaatactgccagccactaacata
tctttcctcaatataaggtcagcattggtattctgaatagatacttttta
ataactagatcttgtgaacaatcacaatcatttctttaccccagatagtt
aatgtagctaagtaattaagaggaaagatgtaggattaccaagcacccgt
ttcactgccaagctctgctccatttttgtttgtaacacaattttgttatt
ttaagaaatcatccctgattgctttcagacacaggcagtttagtaggact
tgtcagctttgactttataatgaactgatctagttttgccatttgcagca
gaaaagctccatctgaggctattggtgcactcagaagaaaacttgcagtt
cttgtctggttaggatatttgggggagtctaggtggtgacgttgcttgca
ataaaggcctacttatgtagtagtatattgtagactctctct
atgtgaaattaagatttatgctaactcttccaaaattattttaacttaca
ttgtaaggtagccttgtctggttttttttttttcatttatttttcaatcc
aggggtgtatgggaagaaaaatgagatttggtggggtaaattcttaaaga
gaggaaggatacaatcttgggaggtggatattggtagggctgtcaagggg
agggggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_57249630_57250825
seq2: B6Ng01-072D02.b_42_1233 (reverse)

seq1  AGAG-GAGTCTACAATATACTGACTACATAAAAGTA-GACTTTATATGCA  48
      |||| |||||||||||||||| |||||||  ||||| | |||||| ||||
seq2  AGAGAGAGTCTACAATATACT-ACTACAT--AAGTAGGCCTTTAT-TGCA  46

seq1  GGCAACACGTCACCACACTAGACT-CCCCAAATATCCTAACCAGACAGGA  97
       |||  |||||||||| ||||||| |||||||||||||||||||||| ||
seq2  AGCA--ACGTCACCAC-CTAGACTCCCCCAAATATCCTAACCAGACAAGA  93

seq1  ACCTGCAAGTTTTC-TCTGGGTGCACCAATAGCCTCAGAT-GAGC-TTTC  144
      | |||||||||||| |||| |||||||||||||||||||| |||| ||||
seq2  A-CTGCAAGTTTTCTTCTGAGTGCACCAATAGCCTCAGATGGAGCTTTTC  142

seq1  TGCTGCAAATGGCAAAACTAGATCAGTTCATTATAAAGTCAAAGCTGACA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAAATGGCAAAACTAGATCAGTTCATTATAAAGTCAAAGCTGACA  192

seq1  AGTCCTACTAAACTGCCTGTGTCTGAAAGCAATCAGGGATGATTTCTTAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTACTAAACTGCCTGTGTCTGAAAGCAATCAGGGATGATTTCTTAA  242

seq1  AATAACAAAATTGTGTTACAAAACAAAAATGGAGCAGAGCTTGGCAGTGA  294
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATAACAAAATTGTGTTAC-AAACAAAAATGGAGCAGAGCTTGGCAGTGA  291

seq1  AACGGGTGCTTGGTAATTCCTACATCTTTCCTCTTAATTACTTAGCTACA  344
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACGGGTGCTTGGTAA-TCCTACATCTTTCCTCTTAATTACTTAGCTACA  340

seq1  TTAACTATCTGGGGTAAAGAAATGATTGTGATTGTTCACAAGATCTAGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATCTGGGGTAAAGAAATGATTGTGATTGTTCACAAGATCTAGTT  390

seq1  ATTAAAAAGTATCTATTCAGAATACCAATGCTGACCTTATATTGAGGAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAGTATCTATTCAGAATACCAATGCTGACCTTATATTGAGGAAA  440

seq1  GATATGTTAGTGGCTGGCAGTATTACAGTTAGATAAAAGGTCCAGAGATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTTAGTGGCTGGCAGTATTACAGTTAGATAAAAGGTCCAGAGATG  490

seq1  CTCACATGTAAATTTTCTTTCATACATTTTTGTAGTTCAGGAGTAATGTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATGTAAATTTTCTTTCATACATTTTTGTAGTTCAGGAGTAATGTT  540

seq1  TTATAGTTACTTTATGAACCAGAAGCAAAGTGTTACTAAACTCGACTGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTACTTTATGAACCAGAAGCAAAGTGTTACTAAACTCGACTGAG  590

seq1  TCTTCAAAAATCTGTTAAAAAATGAAAGCCTTTAAATTATGGATTACTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAAATCTGTTAAAAAATGAAAGCCTTTAAATTATGGATTACTTG  640

seq1  ACATACTTAATTATTTCAACCAGAGGAACAGTTGAATAAAATTTCACCTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTAATTATTTCAACCAGAGGAACAGTTGAATAAAATTTCACCTC  690

seq1  ATCAAAGTTCCCAAGCAAGTAAGCATATTAAACTTGGGAGTTGGAAAAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGTTCCCAAGCAAGTAAGCATATTAAACTTGGGAGTTGGAAAAGA  740

seq1  TGGAGGTGTACCTCCTAATACAAATTCTACTTACAGATATACACTGAAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGTACCTCCTAATACAAATTCTACTTACAGATATACACTGAAAT  790

seq1  CTAATAGTTAAAAGGAGCACACTGAACAAAAGGTATGATTCAAACTTCAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTTAAAAGGAGCACACTGAACAAAAGGTATGATTCAAACTTCAC  840

seq1  ACCATGAACCTCCAGATGAGTCAGAAGAAAGGTGCATCATGATGAACAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAACCTCCAGATGAGTCAGAAGAAAGGTGCATCATGATGAACAAC  890

seq1  TTGCCCCCTAGTTCCAGTCATACCTAACCCTGCTATTGTTGCAACCTCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCCTAGTTCCAGTCATACCTAACCCTGCTATTGTTGCAACCTCTT  940

seq1  CAGTGTACCTAGGTATAATAAAATGATGCTGGCAAGACAGCACCAGTTTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACCTAGGTATAATAAAATGATGCTGGCAAGACAGCACCAGTTTC  990

seq1  ATCAAAGACATTCCTTTCGTGAACAAAAGTGTCAATCTAAGTTGTAGATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACATTCCTTTCGTGAACAAAAGTGTCAATCTAAGTTGTAGATG  1040

seq1  TAGTCATGCAATGTATCCAATGGTGTTCTCCAAAGCTATTTTGACTTAAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGCAATGTATCCAATGGTGTTCTCCAAAGCTATTTTGACTTAAA  1090

seq1  ACACACATATACAAAAATTCCTTAAAACTTAAAAAGACAAAAGAGAACAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATACAAAAATTCCTTAAAACTTAAAAAGACAAAAGAGAACAA  1140

seq1  CAACAACAACAGTGCTCAAAACTAAACTGGAAAATAATAAAATGGAGAAT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAGTGCTCAAAACTAAACTGGAAAATAATAAAATGGAGAAT  1190

seq1  TC  1196
      ||
seq2  TC  1192

seq1: chr10_57094501_57094710
seq2: B6Ng01-072D02.g_73_282

seq1  ATGTGAAATTAAGATTTATGCTAACTCTTCCAAAATTATTTTAACTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATTAAGATTTATGCTAACTCTTCCAAAATTATTTTAACTTACA  50

seq1  TTGTAAGGTAGCCTTGTCTGGTTTTTTTTTTTTCATTTATTTTTCAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGTAGCCTTGTCTGGTTTTTTTTTTTTCATTTATTTTTCAATCC  100

seq1  AGGGGTGTATGGGAAGAAAAATGAGATTTGGTGGGGTAAATTCTTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGTATGGGAAGAAAAATGAGATTTGGTGGGGTAAATTCTTAAAGA  150

seq1  GAGGAAGGATACAATCTTGGGAGGTGGATATTGGTAGGGCTGTCAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGATACAATCTTGGGAGGTGGATATTGGTAGGGCTGTCAAGGGG  200

seq1  AGGGGGAGTT  210
      ||||||||||
seq2  AGGGGGAGTT  210