BAC Information

Click to search

BAC

Clone NameB6Ng01-072K22
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072K22.bB6Ng01-072K22.g
ACCDH890030DH890031
length1,241695
definitionDH890030|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K22, 5' end.DH890031|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaccactctcaaaatgccctcccaattctatctgtctctctcc
atgccacttccttccataccatttcccttgatagctgatcccctgttcct
atccccaactggccttagtctgctcataaaatctattctatttactcctt
ccagggagatctatatatctgcccagaccctaacctttctggatctatag
gctttagcttggttataatttatttaacagctcatatccacatacaagtg
aatacacaacatatttatctttctggtccacctcgcttatatagaaaaac
aaaaaacccagggtagacaaacaaccataaacagtaaaaacaaaacaaaa
acaaaacatggacacaacaatcaatggaaatgcaaaatacaataagatcc
taactcaaaacatccaggaaatccaggacactatgagaagaacaaaccta
aggataataggtatagatgaaaatgaagattttcaacttaaagggtcagc
aaataccttcaacaaaattatagaagaaagcttccctaacctaaagaaag
agatgcccatgagcataaaagaaacctacagaactccaaatagattgacc
agaaaagtaattcctcccgacacataattatcagagcaccaaatgcacta
aacaaagaatattaaaagcagtaagcgaaaaatgtcaagtaacatataaa
ggcagacctattcgaattacaccagacttctcaccagagactatgaaagt
cagaagatcctgtacagatgttatacagacctaaaagaacacaaatgcca
gcctaggctactaaacccagaaaaattctcaattaccatagatggagaaa
ccaaagtattctatgacaaaaccaaaattacacaatatctttccataagt
ccagccttctaactcgtaataaggacacatgctccactattttcatagca
gccttatttatatagccagaagatgggaagaacaaagatgtcactcaaca
gaggaatggatacagaaattgtgtgcatttacccaatggagtactatgca
gctattaaaaatattgaatttatgtattctagaacaatgatgatctggag
gaatcaatctaggggaggtaccaatcacaaaagaaaccacatcagcgact
cactgataagtgatataggccaagttaatccagatactatgccaaaacat
ggaacttcagacaagaatgaatgacctacagggtatgtgat

gaattctcacccgaggaataccgaatggcagtgaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacattcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaaatgaatttatgaaattcctagccaaa
tggatggacctggagagcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtagatattagcccaaaacct
aggattcccaagatataaggtacaatttcctaaacacatgaaactcaaga
agatgaagactgaagtggggacactatgcccctcttagattggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-072K22.g_66_536 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      ||||||||||||||||| || |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATAAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  TGGGGCATCTTCTGGATAAATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAATGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||  |||||||||||||||||||||||||||||||||||| ||
seq2  TCCACATCCATGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGACA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCACTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      ||||||||| |||||||||||
seq2  GTATTCCTCGGGTGAGAATTC  471


| Home | SequenceCutter | Blast | Download |