BAC Information

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BAC

Clone NameB6Ng01-072N08
Chromosome10 (Build37)
Map Location 104,054,261 - 104,054,957
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072N08.bB6Ng01-072N08.g
ACCDH890133DH890134
length1,0101,189
definitionDH890133|Mus musculus domesticus DNA, BAC clone: B6Ng01-072N08, 5' end.DH890134|Mus musculus domesticus DNA, BAC clone: B6Ng01-072N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctggagcaaagcatactgtgtggcttcataggccctggctctg
gggaatccattgtatctttcttgccagctgtgggctattcaattgtgata
aaaactgcatgcatggtattggtatagtgacagacaagtagaccaatgga
acagaattgaagacccagagatgaaccaacacacctatggtcacttgatc
tttaacaagggagctaaaaccatccagtggaaaaaaagacagcattttca
acaaatggtgctggcacaactggcgcttatcatgtagaagaatgtgaatt
gatccatttctatctccttgtactaaggtcaaatctaagtggattaagga
actccacataaaaccagagacactgaaacttatagaggaaaaagtaggga
aaagcctcgaagatatgggtacaggggaaaaattcctgaacagaacagca
atggcttgtgctgtaagatcgagaatcgataaatgtgacctcataaaatt
gcaaagcttctgcaaagcaaaagacaccgtcaataagacaaaaaggccac
caacagattgggaaaggatctttacctattccaaatcggataggggacta
atatccaatatatataaagaactcaagaaggtggactccagaaaatcaaa
taactccattaaaaaatggggctcagagctgaacaaagaattctcacctg
aggaataccgaatggctgagaagcacctgaaaaaatgttcaacatcctta
atcatcagggaaatgcaaatcaaaacaaccctgagattccacttcactca
agtcagaatggctaagataaaaaattcacgtgacagcagatgctagcgag
gatgtggagaaagaggtacctctgatttctaactgtgaaataatacatgg
gccttcccttggccagaaagtgaggtttgctatacttcttaaaatgtaca
caaacttaataatgaaaaccctaaagtacacaatagtgaatgatgctgta
ttcaaagctg

gaattcagactccagaaaatcaaataaccctagtaaaaatggggtacaga
gttaaactaagaattttcaactgaagattatcaaatggctgagaaacacc
taaagaaatgttcaacatccttagtcagcagggaaatgcaaatcaaaaca
accctgagattctacctaactccagtcagaatggttaaaataagaaactt
aattgacaatagatgttggtaaagatgtggagaaaaggaacactcctcca
ttgttggtgggattgcaagctggtacaaccactctggaaatcagttttgc
tgttcctcagaaaattgcacatagtactacctgaggacccagtaatacca
ctcctgagcatatacccagaagatgctccaacatgtaataaagacacatg
ttctactatgttcacagcacccttatttataatagacagaagctggaaag
aacccagatttccctcaacagaggaatggatacagaaaatgtggtacatt
tacacaacagagtactactcagctattaaaaacaatgaattcatgaaatt
cttagtcaaatggatggaactagaaaatatcatcctgtgtgagataaccc
agtcacaaaagaacacacatggtgtgcactcgtggataagtggatattag
cccagaatacccaagatacaatttacagaccacatgaaactcaagaagat
ggaagaccaaagtgtagatactctgtccttcctataagggggaacaaaac
tcccatggaagaagttacagagacaaagtgtggatcagagactgaaggta
tgatcatcgagagactgccccacctggggattcatcccatacatagtcac
taaacccagacactattaaaggatgtcattaagtgcttgctgacagtatt
tttttacactgtctcttgagaggctcttacagtgtgtggcaacacagaag
ttgatgctcacagccaaccatagacagagcacagagttcccaatccagag
ctagagatggaccaaggagctggaaggtttgcagcgtatagagaaacaca
attggaccaacagtacttctaatgctccaggattaacaccaccaagagta
cctgaatgaatcatggctcaatgccattgtagcagaagattgtcttttcg
gtctactattagaggaagtcctttggactctggaaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054261_104054957
seq2: B6Ng01-072N08.b_133_833 (reverse)

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  50

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAACATTTTTTCAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAA  100

seq1  TTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTC  150
      |||||||||||| |||||||||||||||||||| | ||||||||||||||
seq2  TTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGAGTTATTTGATTTTC  150

seq1  TGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTA  200
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTA  200

seq1  TCTGAATTAGGATAGGTAAAGATCCTTTCTCAATCTGTTGGTGGTCTTTT  250
      || || || | |||||||||||||||||| |||||||||||||| |||||
seq2  TCCGATTTGGAATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTT  250

seq1  TGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGA  300
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTATGA  300

seq1  GGTCCCATTTATCAACTCTCTATCTTACAGCACAAGCCATTGCTGTTCTA  350
      |||| |||||||| | |||| |||||||||||||||||||||||||||| 
seq2  GGTCACATTTATCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTG  350

seq1  TTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTT  400

seq1  TTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCC  450

seq1  ACTTAGATTTTACCTTAGTACAAGGAGATAGTAATTGATCAATTCACAAT  500
      |||||||||| |||||||||||||||||||| ||| |||||||||||| |
seq2  ACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTCACATT  500

seq1  CTTCTACATGATAACAGCCAGTTGTGCCAGCATGATTTGTTGAAAATGCT  550
      ||||||||||||||  ||||||||||||||||  ||||||||||||||||
seq2  CTTCTACATGATAAGCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCT  550

seq1  GTCTTTTTTTCCACTGGATAGTTTTAGCTCCCTTGTCAAAGATCAAGTGA  600
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  GTCTTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTTAAAGATCAAGTGA  600

seq1  CCATAGGTGTGTGGGTTCATCTCTGGATCTTCAATTCTGTTCCATTGGTC  650
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  CCATAGGTGTGTTGGTTCATCTCTGGGTCTTCAATTCTGTTCCATTGGTC  650

seq1  TACTTGTCTGTCGCTATACAAGTAC----CATGCAGTTTTTATCACAATT  696
      |||||||||||| |||||| | |||    |||||||||||||||||||||
seq2  TACTTGTCTGTCACTATACCAATACCATGCATGCAGTTTTTATCACAATT  700

seq1  G  697
      |
seq2  G  701


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