BAC Information

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BAC

Clone NameB6Ng01-072N15
ChromosomeX (Build37)10 (Build37)
Map Location 95,340,448 - 95,341,593104,053,991 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEda2r, LOC668244
Downstream geneAr, LOC100042324, Ophn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072N15.bB6Ng01-072N15.g
ACCDH890146DH890147
length1,134442
definitionDH890146|Mus musculus domesticus DNA, BAC clone: B6Ng01-072N15, 5' end.DH890147|Mus musculus domesticus DNA, BAC clone: B6Ng01-072N15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,340,448 - 95,341,593)(104,053,991 - 104,054,363)
sequence
gaattcatcatcatgtagggtaggctggttggtcagtgagtctcagagat
ctacctgtctctgcaatgttggggttaaaagtgtgcagtgcctttcccta
gctttttatttatgtgtgtactggggttcaagcttacgccctcaggcttg
ctactgaaacctttccagattgagctgttttctcgatttttttttaaact
ctaaagtgaaacaaaatctcaaaatgatattatgatggggaggattgact
attgtggtctcacttgaactttgtactcggatgcccatcttaaatctact
tttcctacttagctttcacaatcaagagacaactgctgaagaacgtgata
gaaattagtacttacacaatgtttttcttttgcttcctcctactcttttt
tttccccttgaaatatttttagcagttgaatagaatccatggtgttctcc
caggtcatttgagttcatagtaagtttctctacaagttcagggggctttc
agaatggaatcttccctagcttttgctctagaaaactaaaacaagtaaac
ctttggaaaatggtgaacatttacttgctcttatgagtatattctgaaat
attccacaaatctgtttacttctcttactctggctgcttccaatagggtt
caagacaccctaggtttctgcctggacaacttttcattcaccagtcagcc
actgatcaggcaaatagattataagtagctttataaagatagaagttaca
tgcaacaaaccacgtacatttaaagctgtacaaactgctaagttttggaa
ttttttttggcaccatatatttattatttcctataatatttaagaattac
ctaaacatatacaaaatgtacagttactaaaacagctaattatttctttc
ttcccctatgaaaggaagggctttgctgttcttacatggctagaaccaaa
ataaacaatgtacttgcaattgtaacataagtattacaatggttattagt
aatcttggagcctttgtttttaaagtcaatcttacttatttatttatatc
atttccatttttaattatttataacggatttcctcaatacatttcaatgc
tatgcaaaggtcccatacccccccccatccctac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataagtctttatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_95340448_95341593
seq2: B6Ng01-072N15.b_45_1178 (reverse)

seq1  GTAGGGAAGTGGGGGGGGGGTATGGGGGACTTTTGGGATAGCATTGGAAA  50
      |||||||    ||||||||||||  ||||| ||| | |||||||| ||||
seq2  GTAGGGA---TGGGGGGGGGTAT--GGGACCTTT-GCATAGCATT-GAAA  43

seq1  TGTAATTGAGGAAAATACGTAATAAATAAATTAAAAAATGGAAATGATAT  100
      ||| ||||||| |||| ||| ||||||||  | |||||||||||||||||
seq2  TGT-ATTGAGG-AAATCCGTTATAAATAA--TTAAAAATGGAAATGATAT  89

seq1  AAATAAATAAGTAAAATGGACTTTAAAAAACAAAGGCTCCAAGATTACTA  150
      |||||||||||||| || |||||| |||||||||||||||||||||||||
seq2  AAATAAATAAGTAAGATTGACTTT-AAAAACAAAGGCTCCAAGATTACTA  138

seq1  ATAA-CATTGTAATACTTATGTTACAATTGCAAGTACATTGTTTATTTTG  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATTGTAATACTTATGTTACAATTGCAAGTACATTGTTTATTTTG  188

seq1  GTTCTAGCCATGTAAGAACAGCAAAGCCCCTTCCTTTCATAGGGGAAGAA  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTCTAGCCATGTAAGAACAGCAAAG-CCCTTCCTTTCATAGGGGAAGAA  237

seq1  AGAAATAATTAGCTGTTTTAGTAACTGTACATTTTGTATATGTTTAGGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATTAGCTGTTTTAGTAACTGTACATTTTGTATATGTTTAGGTA  287

seq1  ATTCTTAAATATTATAGGAAATAATAAATATATGGTGCCAAAAAAAATTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAATATTATAGGAAATAATAAATATATGGTGCCAAAAAAAATTC  337

seq1  CAAAACTTAGCAGTTTGTACAGCTTTAAATGTACGTGGTTTGTTGCATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTAGCAGTTTGTACAGCTTTAAATGTACGTGGTTTGTTGCATGT  387

seq1  AACTTCTATCTTTATAAAGCTACTTATAATCTATTTGCCTGATCAGTGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTATCTTTATAAAGCTACTTATAATCTATTTGCCTGATCAGTGGC  437

seq1  TGACTGGTGAATGAAAAGTTGTCCAGGCAGAAACCTAGGGTGTCTTGAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGTGAATGAAAAGTTGTCCAGGCAGAAACCTAGGGTGTCTTGAAC  487

seq1  CCTATTGGAAGCAGCCAGAGTAAGAGAAGTAAACAGATTTGTGGAATATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGGAAGCAGCCAGAGTAAGAGAAGTAAACAGATTTGTGGAATATT  537

seq1  TCAGAATATACTCATAAGAGCAAGTAAATGTTCACCATTTTCCAAAGGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATATACTCATAAGAGCAAGTAAATGTTCACCATTTTCCAAAGGTT  587

seq1  TACTTGTTTTAGTTTTCTAGAGCAAAAGCTAGGGAAGATTCCATTCTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTTTAGTTTTCTAGAGCAAAAGCTAGGGAAGATTCCATTCTGAA  637

seq1  AGCCCCCTGAACTTGTAGAGAAACTTACTATGAACTCAAATGACCTGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCTGAACTTGTAGAGAAACTTACTATGAACTCAAATGACCTGGGA  687

seq1  GAACACCATGGATTCTATTCAACTGCTAAAAATATTTCAAGGGGAAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCATGGATTCTATTCAACTGCTAAAAATATTTCAAGGGGAAAAAA  737

seq1  AAGAGTAGGAGGAAGCAAAAGAAAAACATTGTGTAAGTACTAATTTCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGGAGGAAGCAAAAGAAAAACATTGTGTAAGTACTAATTTCTAT  787

seq1  CACGTTCTTCAGCAGTTGTCTCTTGATTGTGAAAGCTAAGTAGGAAAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTCTTCAGCAGTTGTCTCTTGATTGTGAAAGCTAAGTAGGAAAAGT  837

seq1  AGATTTAAGATGGGCATCCGAGTACAAAGTTCAAGTGAGACCACAATAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAGATGGGCATCCGAGTACAAAGTTCAAGTGAGACCACAATAGT  887

seq1  CAATCCTCCCCATCATAATATCATTTTGAGATTTTGTTTCACTTTAGAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTCCCCATCATAATATCATTTTGAGATTTTGTTTCACTTTAGAGT  937

seq1  TTAAAAAAAAATCGAGAAAACAGCTCAATCTGGAAAGGTTTCAGTAGCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAATCGAGAAAACAGCTCAATCTGGAAAGGTTTCAGTAGCAA  987

seq1  GCCTGAGGGCGTAAGCTTGAACCCCAGTACACACATAAATAAAAAGCTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGGCGTAAGCTTGAACCCCAGTACACACATAAATAAAAAGCTAG  1037

seq1  GGAAAGGCACTGCACACTTTTAACCCCAACATTGCAGAGACAGGTAGATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCACTGCACACTTTTAACCCCAACATTGCAGAGACAGGTAGATC  1087

seq1  TCTGAGACTCACTGACCAACCAGCCTACCCTACATGATGATGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTCACTGACCAACCAGCCTACCCTACATGATGATGAATTC  1134

seq1: chr10_104053991_104054363
seq2: B6Ng01-072N15.g_67_439 (reverse)

seq1  TTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCG  50
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  TTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCA  50

seq1  GTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTC  100
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  GTTGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTC  100

seq1  CGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGA  150
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGA  150

seq1  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  200

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  250

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  300

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  350

seq1  CGGTATTCCTCAGGTGAGAATTC  373
      |||||||||||||||||||||||
seq2  CGGTATTCCTCAGGTGAGAATTC  373