BAC Information

Click to search

BAC

Clone NameB6Ng01-072P21
Chromosome10 (Build37)
Map Location 128,303,468 - 128,463,099
singlet/doubletdoublet
Overlap gene1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763
Upstream geneBC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2
Downstream geneEG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072P21.bB6Ng01-072P21.g
ACCDH890252DH890253
length951994
definitionDH890252|Mus musculus domesticus DNA, BAC clone: B6Ng01-072P21, 5' end.DH890253|Mus musculus domesticus DNA, BAC clone: B6Ng01-072P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,462,526 - 128,463,099)(128,303,468 - 128,304,470)
sequence
gaattccaaccaacaaaggaaatatgaatttttaactaagttctaggcct
agcctttaatggctgagccatctctccagtcctcaagaattttttaaata
aattattcatcagaggaaattaatatctaggataggtaagtaagtacaaa
aatcaaataccaaaaaaatacaatcaataaataaactaataaactagaca
gttttcaaaagaagaaatacaaatagccaaggggtgcttgaaatacattc
agcaccctcagccatcaaggaaatccgaactgaaactgctttgaaatttt
atctcaccctgatcagaatgtatcaagaaagcaaacgatgacaaattctg
cccaagttgtcaggacgaagaattttactctctacaggtgagaatgtgag
ctgatgtggccactatgcatcagcatggggaactgtgtgagttacttctc
tgactggcaaaagacagtgtgaagaagggaaggtccatgtcagcttacag
tcccagacaacagtctgccacggcaggggccacagtgacaggaatatacc
atagctgaccacagacccacaatagggaggcaggagaggtaaatggtgat
gcttagctccatttctgcttttttttttttaagtctatttttattttttt
ttatattttaaattaaagcataattacatcaccttccgtttcttttctcc
ctccagtccttcccatgcacggccccctcttgttccctctcaaaaccatg
gcctctttttctttacctgatgagtccatttagtgttacttgtatctata
tgatctcagggatgatcatatggtattgataacccatcagggagcttacc
cctggggggaaaaatgctttctgctgctctcagcattcattaattggctg
ctgtctacaggtggggccctctgagattttctcccttcagcatcagcata
c
gaattcaaggccagcctggtctacagagtgagttccagggctacacagag
aaaccctgtcttgaaaaaccaaaaaaccaaaaacaaaacagtgataatga
ttcatgaaagcttaacaaatgcagattacaccttctgacctctttttttc
tttctttctccttttcctctttttggtaatggtcccattttatagccgtg
gcctgtcttaaaagttatgatgaccctcattgtactaagtgctagagtta
taaacatgagctaccccatctagcctgtcctgttctctttcttgttgctg
ttgctttcactctctctcccccttcctccctttcttttttttctttctgt
ttctgtttctgtttctgtttctgtttttgtttttgtttttgttttttttt
tttttttttttgagacagagtttctctttgtactagtggctctgtagacc
aggcttgcttcaaactctgagatccatctgcctttgcctcccaagtcctg
ggattaaaggagtgcaccaccacctgacactgttcatttttcttgtgtgt
gttgtttttctccttctaccaggagggtcccagagattgaactcaaatca
tcaggcttgacaagaagtgcttttacctgctgagccatcttgccaccacc
cctgtactttttatatgagtgcactcttaacttctgttaagaattattaa
atcataaatgaggtttttgtttgtgtgcttgtatgtgtgttttgtttgtt
tgtttgtttgtttgagctagtgtctatttagttctggccgttgttatgta
gatcatgctacctttaaactcacatagagcctcctgcctgtgcctcccag
tgttaggtttaaaggttttaatgtgattttaaaagaaaagcaaagacaag
taattgggtgcagaggttgttatgcggaaattttggcatcaggatattgt
gttccagtctgaggaataagagactgggaaatagaggtaattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128462526_128463099
seq2: B6Ng01-072P21.b_45_618 (reverse)

seq1  TATTGTGGGTCTGTGGTCAGCTATGGTATATTCCTGTCACTGTGGCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGGTCTGTGGTCAGCTATGGTATATTCCTGTCACTGTGGCCCCT  50

seq1  GCCGTGGCAGACTGTTGTCTGGGACTGTAAGCTGACATGGACCTTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGGCAGACTGTTGTCTGGGACTGTAAGCTGACATGGACCTTCCCTT  100

seq1  CTTCACACTGTCTTTTGCCAGTCAGAGAAGTAACTCACACAGTTCCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACTGTCTTTTGCCAGTCAGAGAAGTAACTCACACAGTTCCCCAT  150

seq1  GCTGATGCATAGTGGCCACATCAGCTCACATTCTCACCTGTAGAGAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGCATAGTGGCCACATCAGCTCACATTCTCACCTGTAGAGAGTAA  200

seq1  AATTCTTCGTCCTGACAACTTGGGCAGAATTTGTCATCGTTTGCTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCGTCCTGACAACTTGGGCAGAATTTGTCATCGTTTGCTTTCTT  250

seq1  GATACATTCTGATCAGGGTGAGATAAAATTTCAAAGCAGTTTCAGTTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTCTGATCAGGGTGAGATAAAATTTCAAAGCAGTTTCAGTTCGG  300

seq1  ATTTCCTTGATGGCTGAGGGTGCTGAATGTATTTCAAGCACCCCTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGATGGCTGAGGGTGCTGAATGTATTTCAAGCACCCCTTGGCT  350

seq1  ATTTGTATTTCTTCTTTTGAAAACTGTCTAGTTTATTAGTTTATTTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTTCTTCTTTTGAAAACTGTCTAGTTTATTAGTTTATTTATTG  400

seq1  ATTGTATTTTTTTGGTATTTGATTTTTGTACTTACTTACCTATCCTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTTTTTGGTATTTGATTTTTGTACTTACTTACCTATCCTAGAT  450

seq1  ATTAATTTCCTCTGATGAATAATTTATTTAAAAAATTCTTGAGGACTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTCCTCTGATGAATAATTTATTTAAAAAATTCTTGAGGACTGGA  500

seq1  GAGATGGCTCAGCCATTAAAGGCTAGGCCTAGAACTTAGTTAAAAATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCAGCCATTAAAGGCTAGGCCTAGAACTTAGTTAAAAATTCA  550

seq1  TATTTCCTTTGTTGGTTGGAATTC  574
      ||||||||||||||||||||||||
seq2  TATTTCCTTTGTTGGTTGGAATTC  574

seq1: chr10_128303468_128304470
seq2: B6Ng01-072P21.g_68_1056

seq1  GAATTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGGCTACACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGGCTACACAGAG  50

seq1  AAACCCTGTCTTGAAAAACCAAAAAACCAAAAACAAAACAGTGATAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTTGAAAAACCAAAAAACCAAAAACAAAACAGTGATAATGA  100

seq1  TTCATGAAAGCTTAACAAATGCAGATTACACCTTCTGACCTCTTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAAGCTTAACAAATGCAGATTACACCTTCTGACCTCTTTTTTTC  150

seq1  TTTCTTTCTCCTTTTCCTCTTTTTGGTAATGGTCCCATTTTATAGCCGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCCTTTTCCTCTTTTTGGTAATGGTCCCATTTTATAGCCGTG  200

seq1  GCCTGTCTTAAAAGTTATGATGACCCTCATTGTACTAAGTGCTAGAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTTAAAAGTTATGATGACCCTCATTGTACTAAGTGCTAGAGTTA  250

seq1  TAAACATGAGCTACCCCATCTAGCCTGTCCTGTTCTCTTTCTTGTTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGAGCTACCCCATCTAGCCTGTCCTGTTCTCTTTCTTGTTGCTG  300

seq1  TTGCTTTCACTCTCTCTCCCCCTTCCTCCCTTTCTTTTTTTTCTTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCACTCTCTCTCCCCCTTCCTCCCTTTCTTTTTTTTCTTTCTGT  350

seq1  TTCTGTTTCTGTTTCTGTTTCTGTTTTTGTTTTTGTTTTTGTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCTGTTTCTGTTTCTGTTTTTGTTTTTGTTTTTGTTTTTTTTT  400

seq1  TTTTTTTTTTTGAGACAGAGTTTCTCTTTGTACTAGTGGCTCTGTAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGAGACAGAGTTTCTCTTTGTACTAGTGGCTCTGTAGACC  450

seq1  AGGCTTGCTTCAAACTCTGAGATCCATCTGCCTTTGCCTCCCAAGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCTTCAAACTCTGAGATCCATCTGCCTTTGCCTCCCAAGTCCTG  500

seq1  GGATTAAAGGAGTGCACCACCACCTGACACTGTTCATTTTTCTTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAGGAGTGCACCACCACCTGACACTGTTCATTTTTCTTGTGTGT  550

seq1  GTTGTTTTTCTCCTTCTACCAGGAGGGTCCCAGAGATTGAACTCAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTTCTCCTTCTACCAGGAGGGTCCCAGAGATTGAACTCAAATCA  600

seq1  TCAGGCTTGACAAGAAGTGCTTTTACCTGCTGAGCCATCTTGCCACCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTGACAAGAAGTGCTTTTACCTGCTGAGCCATCTTGCCACCACC  650

seq1  CCTGTACTTTTTATATGAGTGCACTCTTAACTTCTGTTAAGAATTATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTTTTTATATGAGTGCACTCTTAACTTCTGTTAAGAATTATTAA  700

seq1  ATCATAAATGAGGTTTTTGTTTGTGTGCTTGTATGTGTGTTTTGTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAATGAGGTTTTTGTTTGTGTGCTTGTATGTGTGTTTTGTTTGTT  750

seq1  TGTTTGTTTGTTTGAGCTAGTGTCTATTTAGTTCTGGCCGTTGTTATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGAGCTAGTGTCTATTTAGTTCTGGCCGTTGTTATGTA  800

seq1  GATCATGCTACCTTTAAACTCACATAGAGCCTCCTGCCTGTGCCTCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGCTACCTTTAAACTCACATAGAGCCTCCTGCCTGTGCCTCCCAG  850

seq1  TGTTAGGTTTAAAGGTTTTAAATGTGATTTTTAAAAAGAAAAGCAAAGAC  900
      ||||||||||||||||||| |||||||||||  |||||||||||||||||
seq2  TGTTAGGTTTAAAGGTTTT-AATGTGATTTT--AAAAGAAAAGCAAAGAC  897

seq1  AAAGTAATTGGGTGCCAGAAGGGTTGTGTATGCGGAAATTTTTGGCATCA  950
       ||||||||||||| ||||  |||||| |||||||||| |||||||||||
seq2  -AAGTAATTGGGTG-CAGA--GGTTGT-TATGCGGAAA-TTTTGGCATCA  941

seq1  GGGATATTGTGTTTCCAGTCTTGAGGAATAAGGAGACTGGGGAAATAGAG  1000
       |||||||||| |||||||| |||||||||| |||||| |||||||||||
seq2  -GGATATTGTG-TTCCAGTC-TGAGGAATAA-GAGACT-GGGAAATAGAG  986

seq1  GTA  1003
      |||
seq2  GTA  989