BAC Information

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BAC

Clone NameB6Ng01-073O17
Chromosome10 (Build37)
Map Location 106,394,351 - 106,395,514
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667758, EG639162, Ppfia2, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq, EG628870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073O17.bB6Ng01-073O17.g
ACCDH890908DH890909
length1,1421,013
definitionDH890908|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O17, 5' end.DH890909|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggaatgaaacacgatgtttgtccctttggtagtgcctgcagtg
gtctagagtgtagtgtttcttcagatttcaatacaaagttactttgtatt
cctaaaagacaggtcccagaacatttcctgctctctggatgaaggaaaga
ctgcgtggattccggctatgatactcttgatactactgtttgttttatat
gtcaaaattgaggatgcgatgtctctcttaatctccctcacagtattatt
accaggcaaaaaagatcatactaaaaccaagatttgggatttatgagaaa
gcagataaccctgtggcatacttgttcttagtcgggagatgtccccaaaa
gtaaacactctcccctctttccctagatgggagcccaataaataagtagc
tggtgtgaaactgtcacgatgtgaacaaacatcattaaatgtcaggagtt
cgatatctgtagaacgagaaattggcagacagtgaacgcaaagccgtttg
gacaactccacacaattcgctgccatcctaccgctgccccgggacaaggt
caggagaaaacatcagggagcgggcaagccgtactttccatagaagcaat
agacctggtcagaaaaaaatggatgcccctgagaggggaagagtcgaaga
ccaatggctttaataacagtgagcccggtgttttgaagggaggcaattgc
agttaaaatcttaaaggcactgcggtctgttgtctggaaattaccgactc
acagttttatttctgcacattggaactctcgatgcaattacaggagcccc
ttctaaaattcatgagcattttgtattcatagctactcacacaccataac
tgccgcagtaaattaactggctgcagtaggcttcaaatcaaaagattttc
taacaaccacgtggatgtgaagttttctcttctagagaaatgcaaatcct
ataaatgaaagtaattaccatttaacagttaggacacaggatcctgttat
ttcattctgggcccgcgggagtggacatcgcaatgttctcctgatgaagt
caccataaagaaatgactcttgaatgccttaatttgttaccgcaatgaga
cctagaataccacaggtttggattatgtagttgctctactcc

gaattcctaacttttctttatttccagccctcccctccagttttattttt
ctttattgactgtttctgcttgaaaatcttaaacggttttcttcatttca
ttctggtgtttttctgtgtgtttcctaggtttctttaaggggtttactca
tttcctctttaagggcctctgtagtattcaaaaggctcttatgaagtcat
tgtccagtgcttcatctacattgtatttcccagggcctaccatggtaaga
attttgagctttagtggaaccatttcgtccgagccatcatattctcatgc
tgccttctagaatctggatttatatttgttgaaaactagctggtgctatc
tggacttgttcttgttagattggtaacccacccctggcttgctgctgctc
tctctggttcctagggtactgtgttggctgtgtattgactggtagagaat
gtttctgaggccctggtaggtgtgaccatgggcggggcctcagagggatg
gttagactgattcttgctattggaagcttccactcagggatggagattgg
ttagaagagggtgtctggaaggagggaaggaatcaggatatgacaccagg
atctgcttaatctcctgggatagagaacagagagagcaaggaggccacag
ttttatagtctgctacagagatggggttgagtgtcagagactgggttctg
atgagacaagggttaatgaacatctgaagagcacctacctgactcattgg
ccagtgtggcctgtgaaagtggttattttgggtgcatgtgattgttcatc
attgaagactcaaggcaggaacttaccagcaagagctgcggcataaacat
gaaaattctgtttattacttgtttatctttgcttgctgtctattagggtt
catggttttaagaaaacacaccaagcagtttaaagatatatactttaata
gtgggaaatacatttcgaagttaaacattaccatcctgtgaaaatctgcg
ttatccagattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106394351_106395514
seq2: B6Ng01-073O17.b_47_1188

seq1  GAATTCTGGAATGAAACACGATGTTTGTCCCTTTGGTAGTGCCTGCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATGAAACACGATGTTTGTCCCTTTGGTAGTGCCTGCAGTG  50

seq1  GTCTAGAGTGTAGTGTTTCTTCAGATTTCAATACAAAGTTACTTTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGTGTAGTGTTTCTTCAGATTTCAATACAAAGTTACTTTGTATT  100

seq1  CCTAAAAGACAGGTCCCAGAACATTTCCTGCTCTCTGGATGAAGGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGACAGGTCCCAGAACATTTCCTGCTCTCTGGATGAAGGAAAGA  150

seq1  CTGCGTGGATTCCGGCTATGATACTCTTGATACTACTGTTTGTTTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGGATTCCGGCTATGATACTCTTGATACTACTGTTTGTTTTATAT  200

seq1  GTCAAAATTGAGGATGCGATGTCTCTCTTAATCTCCCTCACAGTATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATTGAGGATGCGATGTCTCTCTTAATCTCCCTCACAGTATTATT  250

seq1  ACCAGGCAAAAAAGATCATACTAAAACCAAGATTTGGGATTTATGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCAAAAAAGATCATACTAAAACCAAGATTTGGGATTTATGAGAAA  300

seq1  GCAGATAACCCTGTGGCATACTTGTTCTTAGTCGGGAGATGTCCCCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAACCCTGTGGCATACTTGTTCTTAGTCGGGAGATGTCCCCAAAA  350

seq1  GTAAACACTCTCCCCTCTTTCCCTAGATGGGAGCCCAATAAATAAGTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACTCTCCCCTCTTTCCCTAGATGGGAGCCCAATAAATAAGTAGC  400

seq1  TGGTGTGAAACTGTCACGATGTGAACAAACATCATTAAATGTCAGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGAAACTGTCACGATGTGAACAAACATCATTAAATGTCAGGAGTT  450

seq1  CGATATCTGTAGAACGAGAAATTGGCAGACAGTGAACGCAAAGCCGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATCTGTAGAACGAGAAATTGGCAGACAGTGAACGCAAAGCCGTTTG  500

seq1  GACAACTCCACACAATTCGCTGCCATCCTACCGCTGCCCCGGGACAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTCCACACAATTCGCTGCCATCCTACCGCTGCCCCGGGACAAGGT  550

seq1  CAGGAGAAAACATCAGGGAGCGGGCAAGCCGTACTTTCCATAGAAGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAACATCAGGGAGCGGGCAAGCCGTACTTTCCATAGAAGCAAT  600

seq1  AGACCTGGTCAGAAAAAAATGGATGCCCCTGAGAGGGGAAGAGTCGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGTCAGAAAAAAATGGATGCCCCTGAGAGGGGAAGAGTCGAAGA  650

seq1  CCAATGGCTTTAATAACAGTGAGCCCGGTGTTTTGAAGGGAGGCAATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGCTTTAATAACAGTGAGCCCGGTGTTTTGAAGGGAGGCAATTGC  700

seq1  AGTTAAAATCTTAAAGGCACTGCGGTCTGTTGTCTGGAAATTACCGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAATCTTAAAGGCACTGCGGTCTGTTGTCTGGAAATTACCGACTC  750

seq1  ACAGTTTTATTTCTGCACATTGGAACTCTCGATGCAATTACAGGAGCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTATTTCTGCACATTGGAACTCTCGATGCAATTACAGGAGCCCC  800

seq1  TTCTAAAATTCATGAGCATTTTGTATTCATAGCTACTCACACACCATAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATTCATGAGCATTTTGTATTCATAGCTACTCACACACCATAAC  850

seq1  TGCCGCAGTAAATTAACTGGCTGCAGTAGGCTTCAAAATCAAAAGAATTT  900
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  TGCCGCAGTAAATTAACTGGCTGCAGTAGGCTTC-AAATCAAAAG-ATTT  898

seq1  TCTAACAACCACGTGGATGTGAAGTTTTCTCTTCTAAGAGAAATGCAAAT  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTAACAACCACGTGGATGTGAAGTTTTCTCTTCT-AGAGAAATGCAAAT  947

seq1  CCTATAAATGAAAGTAATTACCATTAAACAGTAAGGACACAGGGATCCTG  1000
      ||||||||||||||||||||||||| |||||| |||||||| ||||||||
seq2  CCTATAAATGAAAGTAATTACCATTTAACAGTTAGGACACA-GGATCCTG  996

seq1  TTTATTTCATTCTGGGGCCCGCGGGAGTTGGGACATCGCCAATGCTCT-C  1049
       |||||||||||| ||||||||||||||  |||||||| ||||| ||| |
seq2  -TTATTTCATTCT-GGGCCCGCGGGAGT--GGACATCG-CAATGTTCTCC  1041

seq1  TGATGAAGTCACCCATAAAGAAATGACTTCTAGAATGCTATAATTCGTAT  1099
      ||||||||||| ||||||||||||||| ||| ||||||  ||||| || |
seq2  TGATGAAGTCA-CCATAAAGAAATGAC-TCTTGAATGCCTTAATTTGT-T  1088

seq1  ACAGCAAATGGAAGAACCTAAGATTACCACAAGGTTTTGGGGTTTATGTT  1149
      || || ||||  || |||| ||| |||||| ||||||   || |||||  
seq2  ACCGC-AATG--AG-ACCT-AGAATACCAC-AGGTTT---GGATTATG--  1127

seq1  TGGTTGCTCTACTCC  1164
      | |||||||||||||
seq2  TAGTTGCTCTACTCC  1142


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