BAC Information

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BAC

Clone NameB6Ng01-074M05
Chromosome3 (Build37)10 (Build37)
Map Location 41,059,224 - 41,059,737104,054,064 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074M05.bB6Ng01-074M05.g
ACCDH891518DH891519
length918526
definitionDH891518|Mus musculus domesticus DNA, BAC clone: B6Ng01-074M05, 5' end.DH891519|Mus musculus domesticus DNA, BAC clone: B6Ng01-074M05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,224 - 41,059,737)(104,054,064 - 104,054,363)
sequence
gaattctttgtttagctctgagccccatttttaatggggttatatgattt
tctggagtccaccttcttgagttctttatatatattggatattactcccc
tatctgattcaggataggtaaagatactttcccaatctgttggtggcctt
ttagtcttattgacggtgtcttttgccttgcagaaactttgcaattttat
gaggtcccatttgtcgattctccatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcaaggcttttccctact
ttctcctctataagtttcagtgtctccggttttatgtggagttccttaat
ccacttagatttgaccttagtaaaaggagataggaatggatcaattcaca
ttcttctacatgataaccaccagttgtgccagcaccacttgttgaaaatg
ctcttttctccactggatggttttagctcccttgtcaaagatcaagtgac
cataggagtgtgggttcatttctgggtctttaattctattccactggtct
gcttgtcagttgctataccagtaccatgcagtttttatcacagttgctct
gtagtacagctttaggtcaggcatgatgattccacctgagtttttttttt
ttaatccttaagaagagtttttgctatcttaggtttttgttattccacat
gaatttgcagattgccctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagacagccatt
tttactatattgatcctgccaatccatgagcatgtgatatctttccatct
tctgagatcttctttaatttttttcttcagagacctgaagttcttatcgt
acagatctttcacttcct
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgcgat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctgacgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacgggaggatccagcaatacctctcctgggc
tccattttaatagggttatttagttttctggagtccaacttcttaacttc
tttgtatatattagatattagccccctatcagatttagccttggtaaaga
ccttttctcaaactgttggtggcctttttgtcttattgacagtatccttt
gcctttcagaagctttgcaattttatgacgtctcatttcttgattctcgg
ttttacagcacaagcccatttactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-074M05.b_44_555 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  CCACACTCCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      ||||| |||||  |||||||||||||| ||||||||||||||||||| ||
seq2  GTGGAGAAAAG--AGCATTTTCAACAAGTGGTGCTGGCACAACTGGTGGT  98

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||||||||||| ||||||||||| |||||||||||| |||||||
seq2  TATCATGTAGAAGAATGTGAATTGATCCATTCCTATCTCCTTTTACTAAG  148

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      ||||||||||||||||| ||||||| |||||||||||| |||||||||||
seq2  GTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCGGAGACACTGAA  198

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      |||||||||||||||||| ||||||||||||||||||||||  |||||||
seq2  ACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGTACAGGGG  248

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||| |||||||||||||||||||||||||||||| |||||| 
seq2  AAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATGGAGAATC  298

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      ||||||||||||||||| ||| ||||||| ||||||||||||||||||||
seq2  GACAAATGGGACCTCATAAAATTGCAAAGTTTCTGCAAGGCAAAAGACAC  348

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
      |||||||||||| |||||| ||||||||||||||||||| ||||||||||
seq2  CGTCAATAAGACTAAAAGGCCACCAACAGATTGGGAAAGTATCTTTACCT  398

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      ||||| |||||||||||||| ||||||||||||||||| |||||||||||
seq2  ATCCTGAATCAGATAGGGGAGTAATATCCAATATATATAAAGAACTCAAG  448

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      |||||||| |||||||||||| ||||||||||| ||||||||||||||||
seq2  AAGGTGGACTCCAGAAAATCATATAACCCCATT-AAAAATGGGGCTCAGA  497

seq1  GCTAAACAAAGAATT  514
      |||||||||||||||
seq2  GCTAAACAAAGAATT  512

seq1: chr10_104054064_104054363
seq2: B6Ng01-074M05.g_67_366 (reverse)

seq1  GCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTC  50
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCCAGGAGAGGTATTGCTGGATCCTCCCGTAGTACTATGTCCAATTTTC  50

seq1  TGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCC  100
      ||| |||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCC  100

seq1  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  150
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  CACCAACAATGGAGGAGTGTTCCCCTTTCTCCACATCCTCGTCAGCATCT  150

seq1  GCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGA  200
      |||||||||||| |||||||||||||||||||||||||| |||| |||||
seq2  GCTGTCACCTGAGTTTTTGATCTTAGCCATTCTGACTGGAGTGAAGTGGA  200

seq1  ATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAA  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAA  250

seq1  CATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTTTTTCAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTC  300