BAC Information

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BAC

Clone NameB6Ng01-075E04
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,919 - 104,054,459113,707,372 - 113,708,566
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E04.bB6Ng01-075E04.g
ACCDH891865DH891866
length1,1361,176
definitionDH891865|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E04, 5' end.DH891866|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,919 - 104,054,459)(113,707,372 - 113,708,566)
sequence
gaattcaaactcatttacttgtgaccacatgtggtgcagtcagtgttcct
gctagaaaaaaaaaatgtggagagtgactttagttgagcagaaagtgatc
tacagataagtgatgtcatggaaaacttgtagatatatccagtcttgaat
atatccttgaagtacttatgatattagatcttacaatatagatcctagag
ttgggtactgtactcactccataaggaaataaagtatttgtccatctgac
atatttgcaaaaatagcaatttatatcatggttattggaggataataaac
catggttgtaaaaattgggagagttttctattctgttctgtcattcatcc
cttcactaattatgacagaaaataaagttgacaagcatggttagatgaac
acatttataaataccccaaggagcaatgaacctttggattaatttaatta
tattttaggatcaaaatgaagtatacatttctcattcttagttaaaggct
tttgaaaagttacctggttcaaataaaccttggcttacaatatttgcaaa
ttcttaatattattataatttgactaaagtaaaaatatatttaagaggct
agacagggagactaatatccaatatatataaagaactgaagaaggtggac
tgcagaaaatcaaatgaccccattaaaaatggggctcagagctaaacaaa
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaatggctaagatcaaaaattcaggtggcagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaactgaacatagtactactggaggatccagcaatacctctcctgggca
aatatccagaagatgttctactggaagaaagacacatgctccactatgtc
atagcagctatttataaatagccagaagctggaaagaacccagatacccc
tcaacagagatggatacagaaatgggtacatttaca
gaattcaatagtagatttcaataccagtgaaggaatgcttcatcaacagg
ataaatgcacttgtcctaatgttgagggcaaatcagcagaaagcaagatt
actactcctttcatgtccttttgtgtgggctgccaatagaagttgtagcc
caaatcaaataaccaataaagaaaagtttttatggatgtacttatatgct
tgggttttagttgattccagaagcagtcagatgacagccaatatcagcat
tgcagatatagtcttcatgaattacacaatccagctatttccagtatgta
catttataaatttccttgtcatttatgcacacgtactatagaattgttta
tcttcctgatagatgtgtgtttatgtaccaaaatttttcatgaacaaact
gtttctttaggttctatatctttggaatcattgatgttcatgttaattaa
tggtcattatactatttattacttcaaatatgtttaatttctgtgtttat
acacttatcactcttttgatgtcaatttagcatataacaaagtcaacatt
tgaccatatgatgactagttttatttatggacgaaaataggattcaacag
aatgttaagtgtgatgagtcaacctaatatagatcctttccattaagaca
attttcatgaagaaaattgaatagaatcatcttagtatgtaaaaaacaaa
aaccttttctaaatccagataattctgtaaatatagaatatatgaggatg
agagtttatatttacctaattaagagacatatacaagtgagtgacaatat
gtggaaaaatagctaagaagttgtgattttcctaaccatatgcattcact
aataataaaaacaacaaattcaaaactgtcttcattcctgaacttcagat
actgctacggattggactcagtcagtcctttcacctgcaggagatcagag
tcccagtacagtggtcaaggaatcagcaaaagtgacaaatatggacacag
gtgtgtttttctgatgtaattttgtcaagtgacatcagatttatatatta
aagaagaaaacaaagaagtaagtgtcaccacagcagtacattaaagttat
ctgaaccaaaaacagagaaatgcttcaaagacttgcagacagggcattgt
ttcgtgggataacatcagccctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053919_104054459
seq2: B6Ng01-075E04.b_651_1182 (reverse)

seq1  TGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTG  50
      |||||||||||| || |||||||||| ||  ||||||||||||| |||||
seq2  TGTAAATGTACC-CA-TTTCTGTATCCAT--CTCTGTTGAGGGGTATCTG  46

seq1  GGTTCTTTCCAGCTCCTGGCTA-TTATAAATAAGGCTGCTATGAATATAG  99
      |||||||||||||| ||||||| |||||||||  ||||||||| | ||||
seq2  GGTTCTTTCCAGCTTCTGGCTATTTATAAATA--GCTGCTATG-ACATAG  93

seq1  TGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCC  149
      ||||||||||||| ||||| | |  | |  |||||||||||||| |||||
seq2  TGGAGCATGTGTCTTTCTTCCAG--TAGAACATCTTCTGGATATTTGCCC  141

seq1  AGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAC  199
      || ||||||||||||||||||||| |||||||||||| | | ||||||| 
seq2  AGGAGAGGTATTGCTGGATCCTCCAGTAGTACTATGTTC-AGTTTCTGAG  190

seq1  GAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC  249
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACC  240

seq1  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG  299
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTG  290

seq1  TCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT  349
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCT  340

seq1  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  390

seq1  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTG  449
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTGTTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTG  440

seq1  TTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTCTGAAGTC  499
      || || ||||||||||| |||||||| |||| ||||||||||||| ||||
seq2  TTTAGCTCTGAGCCCCA-TTTTTAATGGGGTCATTTGATTTTCTGCAGTC  489

seq1  CACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTC-CCCT  541
      ||||||||| |||||||||||||| ||||||||||||| ||||
seq2  CACCTTCTTCAGTTCTTTATATATATTGGATATTAGTCTCCCT  532

seq1: chr1_113707372_113708566
seq2: B6Ng01-075E04.g_67_1242

seq1  GAATTCAATAGTAGATTTCAATACCAGTGAAGGAATGCTTCATCAACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGTAGATTTCAATACCAGTGAAGGAATGCTTCATCAACAGG  50

seq1  ATAAATGCACTTGTCCTAATGTTGAGGGCAAATCAGCAGAAAGCAAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCACTTGTCCTAATGTTGAGGGCAAATCAGCAGAAAGCAAGATT  100

seq1  ACTACTCCTTTCATGTCCTTTTGTGTGGGCTGCCAATAGAAGTTGTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTCCTTTCATGTCCTTTTGTGTGGGCTGCCAATAGAAGTTGTAGCC  150

seq1  CAAATCAAATAACCAATAAAGAAAAGTTTTTATGGATGTACTTATATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAATAACCAATAAAGAAAAGTTTTTATGGATGTACTTATATGCT  200

seq1  TGGGTTTTAGTTGATTCCAGAAGCAGTCAGATGACAGCCAATATCAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTAGTTGATTCCAGAAGCAGTCAGATGACAGCCAATATCAGCAT  250

seq1  TGCAGATATAGTCTTCATGAATTACACAATCCAGCTATTTCCAGTATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATATAGTCTTCATGAATTACACAATCCAGCTATTTCCAGTATGTA  300

seq1  CATTTATAAATTTCCTTGTCATTTATGCACACGTACTATAGAATTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATAAATTTCCTTGTCATTTATGCACACGTACTATAGAATTGTTTA  350

seq1  TCTTCCTGATAGATGTGTGTTTATGTACCAAAATTTTTCATGAACAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGATAGATGTGTGTTTATGTACCAAAATTTTTCATGAACAAACT  400

seq1  GTTTCTTTAGGTTCTATATCTTTGGAATCATTGATGTTCATGTTAATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTAGGTTCTATATCTTTGGAATCATTGATGTTCATGTTAATTAA  450

seq1  TGGTCATTATACTATTTATTACTTCAAATATGTTTAATTTCTGTGTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATTATACTATTTATTACTTCAAATATGTTTAATTTCTGTGTTTAT  500

seq1  ACACTTATCACTCTTTTGATGTCAATTTAGCATATAACAAAGTCAACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTATCACTCTTTTGATGTCAATTTAGCATATAACAAAGTCAACATT  550

seq1  TGACCATATGATGACTAGTTTTATTTATGGACGAAAATAGGATTCAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATATGATGACTAGTTTTATTTATGGACGAAAATAGGATTCAACAG  600

seq1  AATGTTAAGTGTGATGAGTCAACCTAATATAGATCCTTTCCATTAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAAGTGTGATGAGTCAACCTAATATAGATCCTTTCCATTAAGACA  650

seq1  ATTTTCATGAAGAAAATTGAATAGAATCATCTTAGTATGTAAAAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATGAAGAAAATTGAATAGAATCATCTTAGTATGTAAAAAACAAA  700

seq1  AACCTTTTCTAAATCCAGATAATTCTGTAAATATAGAATATATGAGGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTCTAAATCCAGATAATTCTGTAAATATAGAATATATGAGGATG  750

seq1  AGAGTTTATATTTACCTAATTAAGAGACATATACAAGTGAGTGACAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTATATTTACCTAATTAAGAGACATATACAAGTGAGTGACAATAT  800

seq1  GTGGAAAAATAGCTAAGAAGTTGTGATTTTCCTAACCATATGCATTCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAATAGCTAAGAAGTTGTGATTTTCCTAACCATATGCATTCACT  850

seq1  AATAATAAAAACAACAAATTCAAAACTGTCTTCATTCCTGAACTTCAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAAAACAACAAATTCAAAACTGTCTTCATTCCTGAACTTCAGAT  900

seq1  ACTGCTACGGATTGGACTCAGTCAGTCCTTTCACCTGCAGGAGAATCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTGCTACGGATTGGACTCAGTCAGTCCTTTCACCTGCAGGAG-ATCAGA  949

seq1  GTCCCAGTACAGGTGGTCAAGGAATCAGCAAAAAGTGACAAATATGGACA  1000
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  GTCCCAGTACA-GTGGTCAAGGAATCAGC-AAAAGTGACAAATATGGACA  997

seq1  CAAGGGTGTGTTGTATCTGAATGTAATTTTGTCAAAGTGACATCAGATTT  1050
      ||  |||||||| | |||| ||||||||||||| ||||||||||||||||
seq2  CA--GGTGTGTT-TTTCTG-ATGTAATTTTGTC-AAGTGACATCAGATTT  1042

seq1  ATATATTACAGAAGAAAACAAAGAAGTTAGGTGTCACCACAGCCAAGGTA  1100
      |||||||| ||||||||||||||||| || |||||||||||||    |||
seq2  ATATATTAAAGAAGAAAACAAAGAAG-TAAGTGTCACCACAGC---AGTA  1088

seq1  CATTAAAGTTATCTG-ACACAAAACAGAGAAATGCCTTCAAAAGACTAGC  1149
      ||||||||||||||| ||  |||||||||||||| |||| ||||||| ||
seq2  CATTAAAGTTATCTGAACCAAAAACAGAGAAATG-CTTC-AAAGACTTGC  1136

seq1  AGGAACCAGGCAATGTTTACAGTTGAGATAACAATCAGCCCTGCCT  1195
      ||  ||  |||| |||||     || |||||| |||||||||||||
seq2  AG--ACAGGGCATTGTTT---CGTGGGATAAC-ATCAGCCCTGCCT  1176