BAC Information

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BAC

Clone NameB6Ng01-075L04
Chromosome10 (Build37)
Map Location 117,446,204 - 117,585,759
singlet/doubletdoublet
Overlap geneMdm1
Upstream geneBest3, Lrrc10, Cct2, Frs2, Yeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b
Downstream geneIl22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L04.bB6Ng01-075L04.g
ACCDH892185DH892186
length1,1801,231
definitionDH892185|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L04, 5' end.DH892186|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,446,204 - 117,447,391)(117,584,517 - 117,585,759)
sequence
gaattccaacaggcttagcacagctcatatttcaagattgagtccagagt
agctgatgatcatactgttggtatcaattgttccagtgaggggctggagt
gatgactcagtggtcaggagcactggctgctcttccagaggaccagagtt
caattcccagtactcccaactggccattaatctagttctggggatccaat
gccctcttctggcctccacaggcactgcatgcacgtggtacacagataca
cacgcaggcaaaacaccagtccaaacaaaacaaaacaaaacaaaacaaaa
caaaacaaaacaaaacaaaacaaaacgttttttaaaaagacaccagtaaa
acctttcacagagtggaagaatcgctgctacacaacagttccatagatga
gaaccaagtttccactccacagagatcggacactaaaaaaaaacattcct
cccaccatgctagagacacgaatgcagagggatggaagtcagccatgctt
gcaacagttgactccatgttttaggcaccctcttctctatcgctgacccc
ttgaatatttgctcagggactctctcaactggtctgaccctctacccact
tttgtgacaatgctttacattttatgtgctgtgtccatcagtgggaccca
caggagtgacccagagaggctcagggaaatggcgtgctatcagtaagatg
ggttagatggcagtgtgggggcagaaatgtggtgtgagaagccgccagaa
caccaccagaagttctttggtgagtttctctctatggcatcaccacagca
aagctcagcaatgcaatgtaaggcgaaccaatacacacatgctgttagca
aagaatggcgaggtggagcaaagcaaaccaatgctctatctctgtctgtg
ggtcatatccatattcccttctgaacatcatgtgtcctttcacatgtttg
ctatagtaaaacatcctctcacctgtgtctgcttcagcaaaacatttgac
atactggcttctcaaaggaaccagaagtttccacttcagtaggatatttg
atgtttgatatttgatctgagagcactgtataacggatgagcagggttta
catcgattgagtctggctctggctcagtacttaatacaagacacagtgaa
tctcacctttctaggatcagctctcatggt
gaattcagtctaagaacaccccagaggacagcagcaattaacagaatatt
tattagcaagataataaaatactaaaattgcacaaaatataatgaaattt
gtctcacaaattagtccattatgccttttaaaattttgcaaataaaaact
caattcctgccatcatttaactgactcaaggggacaattatatgcagtgc
tgctttcaatatataaatgtccaaagcagttagtcttccttaaaaaatag
acatcatgcaaaaacgttaataacaatttagaacataaccaattggatga
ttaagaagatagtgacataaaaccatcctctggcctgtgaacttgccact
ccccctcgctgtcactgccccgcctcccacttagagggcctggcaatgcc
gatcaccaatagcacaggactgtgtagtatcgccactgtagatcagaagg
gagagcaagagcctagcaaacctctcactgtcttccagaactcagagcca
ggcccaggtcagaaccgactctttccatgtagcctgtactcacacacgag
tcaggtgagaacactcagaaacgcatctcttgagctacctgattggatgc
aaacactggagcgctttctttagaagtcttccaaacaaactgcctttggt
attcagaatttctcaaggcattattcgtgggaacaacggccaatccagct
ttcttacgaagatgcctatccaactgttgggggaaaaaacccacttaaag
ctattaaaatttgctacacaaattccttttaagtctaaattgcgctgtaa
agcatgcaacaggaactttatccctttaagttttaagtgtaccttacagt
tttgctaactacattcagacagtagtatggcaaacttttaaatcatcact
tttaaactgtctaaatatttaagcctgctattatgctaatgcatctcaaa
aaatagagtagagccatgctcagttcctttctgccaatcattcacaagta
aatctactatcaatataaataataaatcatagcacctcacctgtccacac
acctctgtggcccccttcctctgccaccaatctccaacatcacctttcaa
tgggaccctgtatgcctggctttctcacagttacagaaatctcctccagc
actcctgggtgcctcaggctccagttcatggctgagttgatacggacaag
gtgaagtctggagaacaaactgtgggaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_117446204_117447391
seq2: B6Ng01-075L04.b_44_1223

seq1  GAATTCCAACAGGCTTAGCACAGCTCATATTTCAAGATTGAGTCCAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACAGGCTTAGCACAGCTCATATTTCAAGATTGAGTCCAGAGT  50

seq1  AGCTGATGATCATACTGTTGGTATCAATTGTTCCAGTGAGGGGCTGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGATCATACTGTTGGTATCAATTGTTCCAGTGAGGGGCTGGAGT  100

seq1  GATGACTCAGTGGTCAGGAGCACTGGCTGCTCTTCCAGAGGACCAGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTCAGTGGTCAGGAGCACTGGCTGCTCTTCCAGAGGACCAGAGTT  150

seq1  CAATTCCCAGTACTCCCAACTGGCCATTAATCTAGTTCTGGGGATCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCAGTACTCCCAACTGGCCATTAATCTAGTTCTGGGGATCCAAT  200

seq1  GCCCTCTTCTGGCCTCCACAGGCACTGCATGCACGTGGTACACAGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTCTGGCCTCCACAGGCACTGCATGCACGTGGTACACAGATACA  250

seq1  CACGCAGGCAAAACACCAGTCCAAACAAAACAAAACAAAACAAAACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCAGGCAAAACACCAGTCCAAACAAAACAAAACAAAACAAAACAAAA  300

seq1  CAAAACAAAACAAAACAAAACAAAACGTTTTTTAAAAAGACACCAGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAAAACAAAACGTTTTTTAAAAAGACACCAGTAAA  350

seq1  ACCTTTCACAGAGTGGAAGAATCGCTGCTACACAACAGTTCCATAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCACAGAGTGGAAGAATCGCTGCTACACAACAGTTCCATAGATGA  400

seq1  GAACCAAGTTTCCACTCCACAGAGATCGGACACTAAAAAAAAACATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAGTTTCCACTCCACAGAGATCGGACACTAAAAAAAAACATTCCT  450

seq1  CCCACCATGCTAGAGACACGAATGCAGAGGGATGGAAGTCAGCCATGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGCTAGAGACACGAATGCAGAGGGATGGAAGTCAGCCATGCTT  500

seq1  GCAACAGTTGACTCCATGTTTTAGGCACCCTCTTCTCTATCGCTGACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGTTGACTCCATGTTTTAGGCACCCTCTTCTCTATCGCTGACCCC  550

seq1  TTGAATATTTGCTCAGGGACTCTCTCAACTGGTCTGACCCTCTACCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTGCTCAGGGACTCTCTCAACTGGTCTGACCCTCTACCCACT  600

seq1  TTTGTGACAATGCTTTACATTTTATGTGCTGTGTCCATCAGTGGGACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACAATGCTTTACATTTTATGTGCTGTGTCCATCAGTGGGACCCA  650

seq1  CAGGAGTGACCCAGAGAGGCTCAGGGAAATGGCGTGCTATCAGTAAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGACCCAGAGAGGCTCAGGGAAATGGCGTGCTATCAGTAAGATG  700

seq1  GGTTAGATGGCAGTGTGGGGGCAGAAATGTGGTGTGAGAAGCCGCCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGATGGCAGTGTGGGGGCAGAAATGTGGTGTGAGAAGCCGCCAGAA  750

seq1  CACCACCAGAAGTTCTTTGGTGAGTTTCTCTCTATGGCATCACCACAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCAGAAGTTCTTTGGTGAGTTTCTCTCTATGGCATCACCACAGCA  800

seq1  AAGCTCAGCAATGCAATGTAAGGCGAACCAATACACACATGCTGTTAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAGCAATGCAATGTAAGGCGAACCAATACACACATGCTGTTAGCA  850

seq1  AAGAATGGCGAGGTGGAGCAAAGCAAACCAATGCTCTATCTCTGTCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGCGAGGTGGAGCAAAGCAAACCAATGCTCTATCTCTGTCTGTG  900

seq1  GGTCATATCCATATT-CCTTCTGAACATCATGTGTCCTTTCACATGTTTG  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGTCATATCCATATTCCCTTCTGAACATCATGTGTCCTTTCACATGTTTG  950

seq1  CTATAGTAAAACATCCTCTCACCTGTGTCTGCTTCAGCAAAACATTTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTAAAACATCCTCTCACCTGTGTCTGCTTCAGCAAAACATTTGAC  1000

seq1  ATACTGGCTTCTCAAAGGAACCAGAAGTTTCCACTTCAGTAGGATATTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGCTTCTCAAAGGAACCAGAAGTTTCCACTTCAGTAGGATATTTG  1050

seq1  ATGTTTGATATTTGATCTGAGAGCCACTGGTATAACGGAATGAGCAAGGG  1099
      ||||||||||||||||||||||| |||| ||||||||| |||||| ||||
seq2  ATGTTTGATATTTGATCTGAGAG-CACT-GTATAACGG-ATGAGC-AGGG  1096

seq1  TTTACCATCAGATGGAGTCCTGGCTCT-GCCCAGTAC-TAATACAAGACA  1147
      |||| |||| ||| |||| |||||||| || |||||| ||||||||||||
seq2  TTTA-CATC-GATTGAGT-CTGGCTCTGGCTCAGTACTTAATACAAGACA  1143

seq1  CAGGTGAATCTCAACTTCTTTAGGAGTCAGCTCTTCATGGT  1188
      || |||||||||| ||| | ||||| ||||||| |||||||
seq2  CA-GTGAATCTCACCTT-TCTAGGA-TCAGCTC-TCATGGT  1180

seq1: chr10_117584517_117585759
seq2: B6Ng01-075L04.g_66_1296 (reverse)

seq1  TGCCTCCCACAGTTCGTTCTCCAGGCACTCACCCTCTTCCTAATCTACTT  50
      |||||||||||||| |||||||||  |||   |||  |||  ||| || |
seq2  TGCCTCCCACAGTTTGTTCTCCAG--ACTTCACCTTGTCCGTATCAAC-T  47

seq1  CAGCCACTGACTGGAAGCCTGGAGCCACCCAGGAGTGCTGGAGGAGA-AT  99
      ||||||   ||||| ||||| ||| ||||||||||||||||||||||  |
seq2  CAGCCATGAACTGG-AGCCT-GAGGCACCCAGGAGTGCTGGAGGAGATTT  95

seq1  CTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCA-TGGAAGGTGA  148
      |||| |||   ||||||||||| |||||||||||  ||| || |||||||
seq2  CTGTAACT--GTGAGAAAGCCA-GGCATACAGGGTCCCATTGAAAGGTGA  142

seq1  TGTGTGAGATTGGTGGGCAGAGGGAAGGGGGCCACAGAGGTGTGTGGACA  198
      |||  ||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TGTTGGAGATTGGT-GGCAGA-GGAAGGGGGCCACAGAGGTGTGTGGACA  190

seq1  GGGTGAGGTGCTATGATTTATTTATTTATATTTGATAGTAGATTTACTTG  248
       ||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  -GGTGAGGTGCTATGATTTA-TTATTTATA-TTGATAGTAGATTTACTTG  237

seq1  TGAATGATTGGCAGAAAGGAACTGAGCATGGCTCTACTCTATTTTTTTGA  298
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAATGATTGGCAGAAAGGAACTGAGCATGGCTCTACTCTA-TTTTTTGA  286

seq1  GATGCATTAGCATAATAGCAGGCTTAAATATTTAGACAGTTTAAAAGTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTAGCATAATAGCAGGCTTAAATATTTAGACAGTTTAAAAGTGA  336

seq1  TGATTTAAAAGTTTGCCATACTACTGTCTGAATGTAGTTAGCAAAACTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAAAGTTTGCCATACTACTGTCTGAATGTAGTTAGCAAAACTGT  386

seq1  AAGGTACACTTAAAACTTAAAGGGATAAAGTTCCTGTTGCATGCTTTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACACTTAAAACTTAAAGGGATAAAGTTCCTGTTGCATGCTTTACA  436

seq1  GCGCAATTTAGACTTAAAAGGAATTTGTGTAGCAAATTTTAATAGCTTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAATTTAGACTTAAAAGGAATTTGTGTAGCAAATTTTAATAGCTTTA  486

seq1  AGTGGGTTTTTTCCCCCAACAGTTGGATAGGCATCTTCGTAAGAAAGCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTTTTTTCCCCCAACAGTTGGATAGGCATCTTCGTAAGAAAGCTG  536

seq1  GATTGGCCGTTGTTCCCACGAATAATGCCTTGAGAAATTCTGAATACCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCCGTTGTTCCCACGAATAATGCCTTGAGAAATTCTGAATACCAA  586

seq1  AGGCAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATC  636

seq1  CAATCAGGTAGCTCAAGAGATGCGTTTCTGAGTGTTCTCACCTGACTCGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGTAGCTCAAGAGATGCGTTTCTGAGTGTTCTCACCTGACTCGT  686

seq1  GTGTGAGTACAGGCTACATGGAAAGAGTCGGTTCTGACCTGGGCCTGGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTACAGGCTACATGGAAAGAGTCGGTTCTGACCTGGGCCTGGCT  736

seq1  CTGAGTTCTGGAAGACAGTGAGAGGTTTGCTAGGCTCTTGCTCTCCCTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCTGGAAGACAGTGAGAGGTTTGCTAGGCTCTTGCTCTCCCTTC  786

seq1  TGATCTACAGTGGCGATACTACACAGTCCTGTGCTATTGGTGATCGGCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTACAGTGGCGATACTACACAGTCCTGTGCTATTGGTGATCGGCAT  836

seq1  TGCCAGGCCCTCTAAGTGGGAGGCGGGGCAGTGACAGCGAGGGGGAGTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCCCTCTAAGTGGGAGGCGGGGCAGTGACAGCGAGGGGGAGTGG  886

seq1  CAAGTTCACAGGCCAGAGGATGGTTTTATGTCACTATCTTCTTAATCATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCACAGGCCAGAGGATGGTTTTATGTCACTATCTTCTTAATCATC  936

seq1  CAATTGGTTATGTTCTAAATTGTTATTAACGTTTTTGCATGATGTCTATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTTATGTTCTAAATTGTTATTAACGTTTTTGCATGATGTCTATT  986

seq1  TTTTAAGGAAGACTAACTGCTTTGGACATTTATATATTGAAAGCAGCACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGAAGACTAACTGCTTTGGACATTTATATATTGAAAGCAGCACT  1036

seq1  GCATATAATTGTCCCCTTGAGTCAGTTAAATGATGGCAGGAATTGAGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAATTGTCCCCTTGAGTCAGTTAAATGATGGCAGGAATTGAGTTT  1086

seq1  TTATTTGCAAAATTTTAAAAGGCATAATGGACTAATTTGTGAGACAAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCAAAATTTTAAAAGGCATAATGGACTAATTTGTGAGACAAATT  1136

seq1  TCATTATATTTTGTGCAATTTTAGTATTTTATTATCTTGCTAATAAATAT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATATTTTGTGCAATTTTAGTATTTTATTATCTTGCTAATAAATAT  1186

seq1  TCTGTTAATTGCTGCTGTCCTCTGGGGTGTTCTTAGACTGAATTC  1243
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAATTGCTGCTGTCCTCTGGGGTGTTCTTAGACTGAATTC  1231