BAC Information

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BAC

Clone NameB6Ng01-075M23
Chromosome10 (Build37)
Map Location 10,868,839 - 11,052,262
singlet/doubletdoublet
Overlap geneShprh, Fbxo30
Upstream geneLOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
Downstream geneEpm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075M23.bB6Ng01-075M23.g
ACCDH892263DH892264
length1,1311,076
definitionDH892263|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M23, 5' end.DH892264|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,051,140 - 11,052,262)(10,868,839 - 10,869,914)
sequence
gaattccatttctataatgccatcatatatataactataatatttcttgg
agaatgggtaataaattcaaacctaagagtttcaggatccaatttaaata
tgcattctttcaaagtccccttgagaaagcttttacttggtcctgttgtg
atttatgtttctgactatgtctttcatcaggcaaagagctgtaaatcttc
ccttatgattctatgtagatgctcacggataggagtcaaacattcgagta
acactggtccagtttcagtatcggtttattactgcaaagaacacatttaa
aagttaaaggtggtgcacatactttcctgattttgtgccttaaagagcag
agcccagtggaagttagaacagagcttagaagtgtccatgagttaattat
agctattttttcttcttgattgaaaacagtgtgttaggctggtcaaaaca
cctctggaaatgtgggaaagcagaagggatataagctatatttatggttt
ttctcaagaacctcatagcatttttccagtgattccactgtgtgtcctct
ccatcaaagagcccttccttcccccatatgccatcacctgcatctttgtc
atactcctttgccttatttataccatattcctcatttatgttatcattcc
tcattttactataaaaatattagtttgaaagctatcctcaagaggcagga
gagatgctgcatcagttaaaagcatagactgcttttgaggatcggagtac
agttcccagcactgcctataacttcagctaaggaggatttaccatctctt
tttgcctctcagacagccggattcacctgcacgtacctctgtacaagcat
acacataatcaaaaacaaaaagaagatccccactatagtggtttgaatat
gtttgacactattaggaggtgtggccttgttggaggaagtgtgtcactct
aggagtcagcctttgagactcttcttctagtgtccggaaccagttcttct
ccagtttgactttgggaacaagatgtagaactaaaccagctcctcctgca
catgccctgcctggaatgctgcccgtgcttctgacacgaatgatatatgg
aactgaacctctgaactcataagccagcccc
gaattcttttggtttagtggattaattgtatatttgtttgggtattataa
ttgctcagcatcgtgaattccgttttatgtaactttctgcctttttatga
aaaccacaactcacatcaagcctaccgctctggcaaagagccccgccctc
tctggcaagaggtcccgccccttctttcgggccccgcccatcctgcattt
gctaaagccacgggaggcggggaaaagagagaggcacaaccaccgcgaga
cttaaaccgtcttctaccgggacctcagggacgggacatgcgcagaggtg
ctttttgaagccaacaccggaaagaggggcggagcgtcccgactggtcct
gcgcgttcgcctggagcgagcgctcctgctggcctcctcagctggcgctg
gcggcttccggcctgggtgccaggcttcacccagcgtgcagcgcgcatgc
gcaactcccgcaggtgagtgtggcgactgtgggcccgggatctgcagcct
gcgaggagggccgggcccggcgacaggtgcctgcagagcggctgaggtag
gtgagggtgcgtgcgggctctggggttagagtcgcggcggagggaggctg
gctctgcgcgtcagggaaactccgagggctcctgcgcagctccgggatcc
ggagtgatcggccctgcgaggccccgcggctcggccccagcccggacgtg
ggccgagcccttctcgcgtgggacgggtgcttgctgcccacgcttgcgtg
ctgaggccctgtcacgagctgtccctccggctccttcttcgaggataact
tgcctttgcaggctggcggtgcgtgggacgacaggtagctgggagggatg
cagaggccgccaagttaggctggcaactctcaagcattacagtcgcctgc
agaagcgccctggctcctgtgcattgtgtgcacttgacgctgcagtagcg
ctagttggtgaacgaagaatgttggtttctggttaaggtaccctgtggga
gaacggtattgttaacagtcttgcctttcacgtggtgccctttaatccac
tttgggcttggaattttattcatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11051140_11052262
seq2: B6Ng01-075M23.b_48_1178 (reverse)

seq1  GGGGCTGGCTTATGGGTTCAGAGGTTCAG-TCCAT-TATCA-TCGTGTCA  47
      |||||||||||||| |||||||||||||| ||||| ||||| ||||||||
seq2  GGGGCTGGCTTATGAGTTCAGAGGTTCAGTTCCATATATCATTCGTGTCA  50

seq1  GGAAGCAC-GGCAGCA-TCCAGGCA-GGCATGGTGCAGGAGGAGCTGG-T  93
       ||||||| ||||||| |||||||| ||||| |||||||||||||||| |
seq2  -GAAGCACGGGCAGCATTCCAGGCAGGGCAT-GTGCAGGAGGAGCTGGTT  98

seq1  TAGTTCTACATCTTGTT-CCAAAGTCAAACTGGAGAAG-ACTGGTTCCGG  141
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  TAGTTCTACATCTTGTTCCCAAAGTCAAACTGGAGAAGAACTGGTTCCGG  148

seq1  ACACTAGAAGAAGAGTCTCAAA-GCTGACTCCTAGAGTGACACACTTCCT  190
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACACTAGAAGAAGAGTCTCAAAGGCTGACTCCTAGAGTGACACACTTCCT  198

seq1  CCAACAAGGCCACACCTCCTAATAGTGTCAAACATATTCAAACCACTATA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGCCACACCTCCTAATAGTGTCAAACATATTCAAACCACTATA  248

seq1  GTGGGGATCTTCTTTTTGTTTTTGATTATGTGTATGCTTGTACAGAGGTA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATCTTCTTTTTGTTTTTGATTATGTGTATGCTTGTACAGAGGTA  298

seq1  CGTGCAGGTGAATCCGGCTGTCTGAGAGGCAAAAAGAGATGGTAAATCCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCAGGTGAATCCGGCTGTCTGAGAGGCAAAAAGAGATGGTAAATCCT  348

seq1  CCTTAGCTGAAGTTATAGGCAGTGCTGGGAACTGTACTCCGATCCTCAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCTGAAGTTATAGGCAGTGCTGGGAACTGTACTCCGATCCTCAAA  398

seq1  AGCAGTCTATGCTTTTAACTGATGCAGCATCTCTCCTGCCTCTTGAGGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTATGCTTTTAACTGATGCAGCATCTCTCCTGCCTCTTGAGGAT  448

seq1  AGCTTTCAAACTAATATTTTTATAGTAAAATGAGGAATGATAACATAAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCAAACTAATATTTTTATAGTAAAATGAGGAATGATAACATAAAT  498

seq1  GAGGAATATGGTATAAATAAGGCAAAGGAGTATGACAAAGATGCAGGTGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATATGGTATAAATAAGGCAAAGGAGTATGACAAAGATGCAGGTGA  548

seq1  TGGCATATGGGGGAAGGAAGGGCTCTTTGATGGAGAGGACACACAGTGGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATATGGGGGAAGGAAGGGCTCTTTGATGGAGAGGACACACAGTGGA  598

seq1  ATCACTGGAAAAATGCTATGAGGTTCTTGAGAAAAACCATAAATATAGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGGAAAAATGCTATGAGGTTCTTGAGAAAAACCATAAATATAGCT  648

seq1  TATATCCCTTCTGCTTTCCCACATTTCCAGAGGTGTTTTGACCAGCCTAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCTTCTGCTTTCCCACATTTCCAGAGGTGTTTTGACCAGCCTAA  698

seq1  CACACTGTTTTCAATCAAGAAGAAAAAATAGCTATAATTAACTCATGGAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTTTCAATCAAGAAGAAAAAATAGCTATAATTAACTCATGGAC  748

seq1  ACTTCTAAGCTCTGTTCTAACTTCCACTGGGCTCTGCTCTTTAAGGCACA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAAGCTCTGTTCTAACTTCCACTGGGCTCTGCTCTTTAAGGCACA  798

seq1  AAATCAGGAAAGTATGTGCACCACCTTTAACTTTTAAATGTGTTCTTTGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGAAAGTATGTGCACCACCTTTAACTTTTAAATGTGTTCTTTGC  848

seq1  AGTAATAAACCGATACTGAAACTGGACCAGTGTTACTCGAATGTTTGACT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAACCGATACTGAAACTGGACCAGTGTTACTCGAATGTTTGACT  898

seq1  CCTATCCGTGAGCATCTACATAGAATCATAAGGGAAGATTTACAGCTCTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCGTGAGCATCTACATAGAATCATAAGGGAAGATTTACAGCTCTT  948

seq1  TGCCTGATGAAAGACATAGTCAGAAACATAAATCACAACAGGACCAAGTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATGAAAGACATAGTCAGAAACATAAATCACAACAGGACCAAGTA  998

seq1  AAAGCTTTCTCAAGGGGACTTTGAAAGAATGCATATTTAAATTGGATCCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTCTCAAGGGGACTTTGAAAGAATGCATATTTAAATTGGATCCT  1048

seq1  GAAACTCTTAGGTTTGAATTTATTACCCATTCTCCAAGAAATATTATAGT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTTAGGTTTGAATTTATTACCCATTCTCCAAGAAATATTATAGT  1098

seq1  TATATATATGATGGCATTATAGAAATGGAATTC  1123
      |||||||||||||||||||||||||||||||||
seq2  TATATATATGATGGCATTATAGAAATGGAATTC  1131

seq1: chr10_10868839_10869914
seq2: B6Ng01-075M23.g_68_1143

seq1  GAATTCTTTTGGTTTAGTGGATTAATTGTATATTTGTTTGGGTATTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGTTTAGTGGATTAATTGTATATTTGTTTGGGTATTATAA  50

seq1  TTGCTCAGCATCGTGAATTCCGTTTTATGTAACTTTCTGCCTTTTTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGCATCGTGAATTCCGTTTTATGTAACTTTCTGCCTTTTTATGA  100

seq1  AAACCACAACTCACATCAAGCCTACCGCTCTGGCAAAGAGCCCCGCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAACTCACATCAAGCCTACCGCTCTGGCAAAGAGCCCCGCCCTC  150

seq1  TCTGGCAAGAGGTCCCGCCCCTTCTTTCGGGCCCCGCCCATCCTGCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAAGAGGTCCCGCCCCTTCTTTCGGGCCCCGCCCATCCTGCATTT  200

seq1  GCTAAAGCCACGGGAGGCGGGGAAAAGAGAGAGGCACAACCACCGCGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGCCACGGGAGGCGGGGAAAAGAGAGAGGCACAACCACCGCGAGA  250

seq1  CTTAAACCGTCTTCTACCGGGACCTCAGGGACGGGACATGCGCAGAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACCGTCTTCTACCGGGACCTCAGGGACGGGACATGCGCAGAGGTG  300

seq1  CTTTTTGAAGCCAACACCGGAAAGAGGGGCGGAGCGTCCCGACTGGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAAGCCAACACCGGAAAGAGGGGCGGAGCGTCCCGACTGGTCCT  350

seq1  GCGCGTTCGCCTGGAGCGAGCGCTCCTGCTGGCCTCCTCAGCTGGCGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGTTCGCCTGGAGCGAGCGCTCCTGCTGGCCTCCTCAGCTGGCGCTG  400

seq1  GCGGCTTCCGGCCTGGGTGCCAGGCTTCACCCAGCGTGCAGCGCGCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTTCCGGCCTGGGTGCCAGGCTTCACCCAGCGTGCAGCGCGCATGC  450

seq1  GCAACTCCCGCAGGTGAGTGTGGCGACTGTGGGCCCGGGATCTGCAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCCCGCAGGTGAGTGTGGCGACTGTGGGCCCGGGATCTGCAGCCT  500

seq1  GCGAGGAGGGCCGGGCCCGGCGACAGGTGCCTGCAGAGCGGCTGAGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGAGGGCCGGGCCCGGCGACAGGTGCCTGCAGAGCGGCTGAGGTAG  550

seq1  GTGAGGGTGCGTGCGGGCTCTGGGGTTAGAGTCGCGGCGGAGGGAGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGTGCGTGCGGGCTCTGGGGTTAGAGTCGCGGCGGAGGGAGGCTG  600

seq1  GCTCTGCGCGTCAGGGAAACTCCGAGGGCTCCTGCGCAGCTCCGGGATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCGCGTCAGGGAAACTCCGAGGGCTCCTGCGCAGCTCCGGGATCC  650

seq1  GGAGTGATCGGCCCTGCGAGGCCCCGCGGCTCGGCCCCAGCCCGGACGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATCGGCCCTGCGAGGCCCCGCGGCTCGGCCCCAGCCCGGACGTG  700

seq1  GGCCGAGCCCTTCTCGCGTGGGACGGGTGCTTGCTGCCCACGCTTGCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGAGCCCTTCTCGCGTGGGACGGGTGCTTGCTGCCCACGCTTGCGTG  750

seq1  CTGAGGCCCTGTCACGAGCTGTCCCTCCGGCTCCTTCTTCGAGGATAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCCTGTCACGAGCTGTCCCTCCGGCTCCTTCTTCGAGGATAACT  800

seq1  TGCC-TTGCAGGCTGGCGGTGCGTGGGACGACAGGTAGCTGGGAGGGATG  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGCAGGCTGGCGGTGCGTGGGACGACAGGTAGCTGGGAGGGATG  850

seq1  CAGAGGCCGCCAAGTTAGGCTGGCAAACTCTCAAGCATTACAGTCGCCTG  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGAGGCCGCCAAGTTAGGCTGGC-AACTCTCAAGCATTACAGTCGCCTG  899

seq1  CAGAAGCGCCCTGGCTCCTGTGCATTGTGTGCACTTTGACGCTGCAGGTA  949
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CAGAAGCGCCCTGGCTCCTGTGCATTGTGTGCAC-TTGACGCTGCA-GTA  947

seq1  GCGCTAGGTTGGTGAACGAAG-ATGTTGGTTTCTGGTTAAGGTACCCTGT  998
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  GCGCTA-GTTGGTGAACGAAGAATGTTGGTTTCTGGTTAAGGTACCCTGT  996

seq1  GGGAGGAACGGTATTGTTTACAGTCTTGCCTTTTCACCGTGGTGCCTTTT  1048
      |||| ||||||||||||| ||||||||||| ||||| ||||||||| |||
seq2  GGGA-GAACGGTATTGTTAACAGTCTTGCC-TTTCA-CGTGGTGCCCTTT  1043

seq1  AATCCACTT--GGCTT-GAATTT--ATCATGGC  1076
      |||||||||  ||||| ||||||   |||||||
seq2  AATCCACTTTGGGCTTGGAATTTTATTCATGGC  1076