BAC Information

Click to search

BAC

Clone NameB6Ng01-076H07
Chromosome10 (Build37)
Map Location 129,468,569 - 129,602,138
singlet/doubletdoublet
Overlap geneOlfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825
Upstream geneEG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820
Downstream geneOlfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076H07.bB6Ng01-076H07.g
ACCDH892717DH892718
length1,158666
definitionDH892717|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H07, 5' end.DH892718|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,600,990 - 129,602,138)(129,468,569 - 129,469,234)
sequence
gaattcatattaaagataagtaagttaccttaacactctagaacatggaa
acgtggccaggtaatgatcagggcgcacttattaaagtacaagtgcagca
ctaagtctcaagaatgaccaataacatggattccatagctgtatttcttc
atgccaaattacaattctgaccccagtagatgaaattttgagacattatg
tttcgtacctcatttgtaaatatgaaatgtattatctcctcattttatta
ttttatagattaaatgagtgtggctgaagcatttaggaagatgtctggca
taacaaaatattatattaacatttgtaataattgttattatccatactca
agaacacaaagttcaaactggatataaaaaggagtagattgctttacaaa
tagaagaacataagaaagtctatgtgagctctctaagaaatgtgttatta
ttggttgtgaaagcatatgtagagaaataaaaaaaggcaatttaagccta
tttttcccatttttatttccagtatatcatgtaaatatgctgtacccttt
ttttaatcttggaattacaaaatccaggaaaaatttaaaataatatttgc
tgaaccttgagacacagatcagaaatcagcaccaatcaaaagggagaggt
aagataagtgcaaggctttctaggctctacagaaggtttaagagaagtct
tggcaatttggcaagatctcagtataaaatgcacatgaagtgagaaggta
ttgggcttactggcagagtgcattcggggcattcatgagatgttaagttc
aatttctaatactatcagtaaatgtactagtgtttcctctggtaacaaat
cctatgatatatatgttaaccatttgtataattggttatatacttgtaac
cactatttatctttaggacaccaaatagataatggataatacaagctatt
ttttttttaattcaatcattaaaaaaatatctattgaaactcgaagctaa
aactccaagcttatctaaattttaatattaaaggtctccagtatctttaa
aaccacacttaaactttctttctggatggccattttttatgggtacagaa
caatcatttttattgggtggagggatgcatcagtcttgggcgctggcctt
cctcatgc
gaattctttcttaattccttaagcgtctacctgcgttagtatgtggtttc
ataagcagcaccgatgtaaagagatcataataaaagggtgagtgttacat
ttgtaatatatattcattgatccaccctatttcctttttcatctaacttt
gtgtcttttgtatatcaaggcctatctatgctcgatgtgtgtccttccag
tggagtgtggtctatttctgaatgttaccatactagataatggatctttc
accgaatgaagtctttctatgtctttgagctttaaactggtggcttcaaa
gttcataatgtctcactcatgtgtactaataccataaacattatgtttat
atgttcagaaaaaaagatattcagacacatttaaaaatgatcaaatgaaa
acgcataaaaaaaggattcaaagttaaaaagtaatcaagtgagcttagga
gaacttacttatgtacttacatagcattcctagttctataatttttttca
cactagaaatggtatttaaatctagcatcaatgggaggcgacgcccttgg
tcctgtgaaggttcgatgcccagcataggggaatgctagggtggtgaagc
aggagtggccggatagatgggaaagcaccatcatggatgcagggggtaga
ggggatgggaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129600990_129602138
seq2: B6Ng01-076H07.b_47_1204 (reverse)

seq1  GCATGAGGAAGG-CAGCGGCCAAGACTGATGCA-CCCT-CACCCAAT--A  45
      |||||||||||| ||||| |||||||||||||| |||| ||||||||  |
seq2  GCATGAGGAAGGCCAGCGCCCAAGACTGATGCATCCCTCCACCCAATAAA  50

seq1  AATGATTGTTCTGTA-CCATTAAAAAT-GACATTCAGGAAG-AAGTTTAA  92
      ||||||||||||||| |||| |||||| | ||| ||| ||| ||||||||
seq2  AATGATTGTTCTGTACCCATAAAAAATGGCCATCCAGAAAGAAAGTTTAA  100

seq1  GTGTTGTTTTAAAGATACTGTAGA-CTTTAATATTAAAATTTAGATAAGC  141
      |||| ||||||||||||||| ||| |||||||||||||||||||||||||
seq2  GTGTGGTTTTAAAGATACTGGAGACCTTTAATATTAAAATTTAGATAAGC  150

seq1  TTGGAGTTTTAGCTTCGAGTTTCAATAGATATTTTTTTTAATGATTGAAT  191
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGGAGTTTTAGCTTCGAGTTTCAATAGATA-TTTTTTTAATGATTGAAT  199

seq1  T-AAAAAAAAATAGCTTGTATTATCCATTATCTATTTGGTGTCCTAAAGA  240
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAATAGCTTGTATTATCCATTATCTATTTGGTGTCCTAAAGA  249

seq1  TAAATAGTGGTTACAAGTATATAACCAATTATACAAATGGTTAACATATA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTGGTTACAAGTATATAACCAATTATACAAATGGTTAACATATA  299

seq1  TATCATAGGATTTGTTACCAGAGGAAACACTAGTACATTTACTGATAGTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAGGATTTGTTACCAGAGGAAACACTAGTACATTTACTGATAGTA  349

seq1  TTAGAAATTGAACTTAACATCTCATGAATGCCCCGAATGCACTCTGCCAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTGAACTTAACATCTCATGAATGCCCCGAATGCACTCTGCCAG  399

seq1  TAAGCCCAATACCTTCTCACTTCATGTGCATTTTATACTGAGATCTTGCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCAATACCTTCTCACTTCATGTGCATTTTATACTGAGATCTTGCC  449

seq1  AAATTGCCAAGACTTCTCTTAAACCTTCTGTAGAGCCTAGAAAGCCTTGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCAAGACTTCTCTTAAACCTTCTGTAGAGCCTAGAAAGCCTTGC  499

seq1  ACTTATCTTACCTCTCCCTTTTGATTGGTGCTGATTTCTGATCTGTGTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCTTACCTCTCCCTTTTGATTGGTGCTGATTTCTGATCTGTGTCT  549

seq1  CAAGGTTCAGCAAATATTATTTTAAATTTTTCCTGGATTTTGTAATTCCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTCAGCAAATATTATTTTAAATTTTTCCTGGATTTTGTAATTCCA  599

seq1  AGATTAAAAAAAGGGTACAGCATATTTACATGATATACTGGAAATAAAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAAAAGGGTACAGCATATTTACATGATATACTGGAAATAAAAA  649

seq1  TGGGAAAAATAGGCTTAAATTGCCTTTTTTTATTTCTCTACATATGCTTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAATAGGCTTAAATTGCCTTTTTTTATTTCTCTACATATGCTTT  699

seq1  CACAACCAATAATAACACATTTCTTAGAGAGCTCACATAGACTTTCTTAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCAATAATAACACATTTCTTAGAGAGCTCACATAGACTTTCTTAT  749

seq1  GTTCTTCTATTTGTAAAGCAATCTACTCCTTTTTATATCCAGTTTGAACT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCTATTTGTAAAGCAATCTACTCCTTTTTATATCCAGTTTGAACT  799

seq1  TTGTGTTCTTGAGTATGGATAATAACAATTATTACAAATGTTAATATAAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTTGAGTATGGATAATAACAATTATTACAAATGTTAATATAAT  849

seq1  ATTTTGTTATGCCAGACATCTTCCTAAATGCTTCAGCCACACTCATTTAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTATGCCAGACATCTTCCTAAATGCTTCAGCCACACTCATTTAA  899

seq1  TCTATAAAATAATAAAATGAGGAGATAATACATTTCATATTTACAAATGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAATAATAAAATGAGGAGATAATACATTTCATATTTACAAATGA  949

seq1  GGTACGAAACATAATGTCTCAAAATTTCATCTACTGGGGTCAGAATTGTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACGAAACATAATGTCTCAAAATTTCATCTACTGGGGTCAGAATTGTA  999

seq1  ATTTGGCATGAAGAAATACAGCTATGGAATCCATGTTATTGGTCATTCTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCATGAAGAAATACAGCTATGGAATCCATGTTATTGGTCATTCTT  1049

seq1  GAGACTTAGTGCTGCACTTGTACTTTAATAAGTGCGCCCTGATCATTACC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTAGTGCTGCACTTGTACTTTAATAAGTGCGCCCTGATCATTACC  1099

seq1  TGGCCACGTTTCCATGTTCTAGAGTGTTAAGGTAACTTACTTATCTTTAA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACGTTTCCATGTTCTAGAGTGTTAAGGTAACTTACTTATCTTTAA  1149

seq1  TATGAATTC  1149
      |||||||||
seq2  TATGAATTC  1158

seq1: chr10_129468569_129469234
seq2: B6Ng01-076H07.g_68_733

seq1  GAATTCTTTCTTAATTCCTTAAGCGTCTACCTGCGTTAGTATGTGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAATTCCTTAAGCGTCTACCTGCGTTAGTATGTGGTTTC  50

seq1  ATAAGCAGCACCGATGTAAAGAGATCATAATAAAAGGGTGAGTGTTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGCACCGATGTAAAGAGATCATAATAAAAGGGTGAGTGTTACAT  100

seq1  TTGTAATATATATTCATTGATCCACCCTATTTCCTTTTTCATCTAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATATATATTCATTGATCCACCCTATTTCCTTTTTCATCTAACTTT  150

seq1  GTGTCTTTTGTATATCAAGGCCTATCTATGCTCGATGTGTGTCCTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTGTATATCAAGGCCTATCTATGCTCGATGTGTGTCCTTCCAG  200

seq1  TGGAGTGTGGTCTATTTCTGAATGTTACCATACTAGATAATGGATCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTGGTCTATTTCTGAATGTTACCATACTAGATAATGGATCTTTC  250

seq1  ACCGAATGAAGTCTTTCTATGTCTTTGAGCTTTAAACTGGTGGCTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATGAAGTCTTTCTATGTCTTTGAGCTTTAAACTGGTGGCTTCAAA  300

seq1  GTTCATAATGTCTCACTCATGTGTACTAATACCATAAACATTATGTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAATGTCTCACTCATGTGTACTAATACCATAAACATTATGTTTAT  350

seq1  ATGTTCAGAAAAAAAGATATTCAGACACATTTAAAAATGATCAAATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGAAAAAAAGATATTCAGACACATTTAAAAATGATCAAATGAAA  400

seq1  ACGCATAAAAAAAGGATTCAAAGTTAAAAAGTAATCAAGTGAGCTTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATAAAAAAAGGATTCAAAGTTAAAAAGTAATCAAGTGAGCTTAGGA  450

seq1  GAACTTACTTATGTACTTACATAGCATTCCTAGTTCTATAATTTTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTACTTATGTACTTACATAGCATTCCTAGTTCTATAATTTTTTTCA  500

seq1  CACTAGAAATGGTATTTAAATCTAGCATCAATGGGAGGCGACGCCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAAATGGTATTTAAATCTAGCATCAATGGGAGGCGACGCCCTTGG  550

seq1  TCCTGTGAAGGTTCGATGCCCAGCATAGGGGAATGCTAGGGTGGTGAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAAGGTTCGATGCCCAGCATAGGGGAATGCTAGGGTGGTGAAGC  600

seq1  AGGAGTGGCCGGATAGATGGGAAAGCACCATCATGGATGCAGGGGGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGCCGGATAGATGGGAAAGCACCATCATGGATGCAGGGGGTAGA  650

seq1  GGGGATGGGAGGGGAA  666
      ||||||||||||||||
seq2  GGGGATGGGAGGGGAA  666