BAC Information

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BAC

Clone NameB6Ng01-076L08
Chromosome10 (Build37)
Map Location 34,893,434 - 34,894,372
singlet/doubletsinglet
Overlap genenone
Upstream geneDse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk, LOC667824
Downstream geneLOC100041585, LOC667860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076L08.bB6Ng01-076L08.g
ACCDH892892DH892893
length1,252937
definitionDH892892|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L08, 5' end.DH892893|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctctgtacctcattttttaatagggttatttgatt
ttctggagtccatcttcctgagttctttatacatttttgatattagtccc
ctatctgatttaggcttgctaaagatcctttcccaatgtgttgttggcct
ttttgtcttattgacagtgtcttttgccttatagaagctttgcaatttta
tgaggtcccatttgtcaatctcaatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgtccatatcttctaggcttttccccact
ttctcttctataagtttcagtgtgtctggttttatttggagttcattaat
ccatatagacttgtccttagtacaaggagataaggatggatgaatttgca
ttcttctacatgataactgccaattgtaccatcaccatttgttgaaaatg
ctgtcttttttccactggatgattttcgctcctttgtcaaatatcaagtg
atcataggtttgtgggttcatttctgagtattcagtttttattccattga
tctacctgtgtgttgctgtacaagtattgtgcagtttttaatcacaattg
ctctgtagtacagcttgagcttaggcatggtgattccaacagaggtttct
ttttataattgagaaaagattttgctatcctagatttttttttattccag
atgaatttgaaaattgccgtttctaattccttgaaaaatggagttggaat
gttgatgggtattgcattgaacatgtagattgttttccacaagatagcca
ttttgactatatttatcctgccaatccatgagtatgggagatctttccat
cttctgagatcttctttgatttctttcttcagagacttgagattcttatc
atacagatctttcacttccttagttaaagtcacaccaatagttttatgtt
atttgtgactattgtgaagggtgttgtttccctaatttcttctcagcctg
tttattcttttgtgtagagaaaggccattgacttgtttgagtaaatttta
atatccagctacttaccgagctgtttatcagggttaagggagttcctctg
gtgattttagggtcacttatattaactatctatcatctggcaatatggaa
atttgaactctccttccacttgtatccgttgactcctctgtgtcattgct
tgcaagactcagatcaatatgtaaatggttcgagataagagtggtacgac
at
gaattctttctattatttgcatccaaattttctcctctgtccacaaactc
tgacttccaagttaaatattggcctctagtgaggacagactgaacaactt
tattccattcattgggtatcaagtcgccttctcctgctaaaccttctaat
atagatactgtgaacaggcattaaccccataatttttgactgctgaatga
agatcttttacatgtctcagttttagctttttgtagactggttggttgtt
ggtgtccaacccttcatcgggagacatgccaccctcatcagaatcagagt
ttgcttgatcctcctccttatcactctctggttccccctgatcttttgcg
gaggagccagtgggggggggggtcctcatgacatagagcagcctgatggg
cttgagctcgtgtgaggacaggaaaagccaattttttattaccttgtttc
tgagagggacctttgcggccagtttgaggattttttgagatgggaccctg
aaggttccccatgagggctctttgtagactctgagtctctagactgaggt
cttgtagctccttttgaagccctagaacatctttaagattggtaatctga
gtctgaagctctctcttagtttgaagtaatcactgaacagatgaaggggc
cagcgatacaggccgaggattaggctgaggattgaggggaaagggggaaa
aataaggaggagggtggaaattgaagggctctattgttaagataggcacc
aggcctgggacatatgggtcttgttcatattttaaggcttcctcatccca
attctgcctccgaggcaggatcgagggtttcatctgactacttctttata
caaatggggtaaattctttttggtttaacagggggtcgagcaatacccct
tttctaaatttaatgtatttggggagaaagaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34893434_34894372
seq2: B6Ng01-076L08.g_66_1002

seq1  GAATTCTTTCTATTATTTGCATCCAAATTTTCTCCTCTGTCCACAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATTATTTGCATCCAAATTTTCTCCTCTGTCCACAAACTC  50

seq1  TGACTTCCAAGTTAAATATTGGCCTCTAGTGAGGACAGACTGAACAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCCAAGTTAAATATTGGCCTCTAGTGAGGACAGACTGAACAACTT  100

seq1  TATTCCATTCATTGGGTATCAAGTCGCCTTCTCCTGCTAAACCTTCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATTCATTGGGTATCAAGTCGCCTTCTCCTGCTAAACCTTCTAAT  150

seq1  ATAGATACTGTGAACAGGCATTAACCCCATAATTTTTGACTGCTGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATACTGTGAACAGGCATTAACCCCATAATTTTTGACTGCTGAATGA  200

seq1  AGATCTTTTACATGTCTCAGTTTTAGCTTTTTGTAGACTGGTTGGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTTACATGTCTCAGTTTTAGCTTTTTGTAGACTGGTTGGTTGTT  250

seq1  GGTGTCCAACCCTTCATCGGGAGACATGCCACCCTCATCAGAATCAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCAACCCTTCATCGGGAGACATGCCACCCTCATCAGAATCAGAGT  300

seq1  TTGCTTGATCCTCCTCCTTATCACTCTCTGGTTCCCCCTGATCTTTTGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGATCCTCCTCCTTATCACTCTCTGGTTCCCCCTGATCTTTTGCG  350

seq1  GAGGAGCCAGTGGGGGGGGGGGTCCTCATGACATAGAGCAGCCTGATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCCAGTGGGGGGGGGGGTCCTCATGACATAGAGCAGCCTGATGGG  400

seq1  CTTGAGCTCGTGTGAGGACAGGAAAAGCCAATTTTTTATTACCTTGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTCGTGTGAGGACAGGAAAAGCCAATTTTTTATTACCTTGTTTC  450

seq1  TGAGAGGGACCTTTGCGGCCAGTTTGAGGATTTTTTGAGATGGGACCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGACCTTTGCGGCCAGTTTGAGGATTTTTTGAGATGGGACCCTG  500

seq1  AAGGTTCCCCATGAGGGCTCTTTGTAGACTCTGAGTCTCTAGACTGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCCCCATGAGGGCTCTTTGTAGACTCTGAGTCTCTAGACTGAGGT  550

seq1  CTTGTAGCTCCTTTTGAAGCCCTAGAACATCTTTAAGATTGGTAATCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGCTCCTTTTGAAGCCCTAGAACATCTTTAAGATTGGTAATCTGA  600

seq1  GTCTGAAGCTCTCTCTTAGTTTGAAGTAATCACTGAACAGATGAAGGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGCTCTCTCTTAGTTTGAAGTAATCACTGAACAGATGAAGGGGC  650

seq1  CAGCGATACAGGCCGAGGATTAGGCTGAGGATTGAGGGGAAAGGGGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATACAGGCCGAGGATTAGGCTGAGGATTGAGGGGAAAGGGGGAAA  700

seq1  AATAAGGAGGAGGGTGGAAATTGAAGGGCTCGA-TGGTAAGATAGGCACC  749
      ||||||||||||||||||||||||||||||| | || |||||||||||||
seq2  AATAAGGAGGAGGGTGGAAATTGAAGGGCTCTATTGTTAAGATAGGCACC  750

seq1  AGGCCTGGGACCATAGTGGTCTTGTTCATATTTAAAGGCTTCCTCAT-CC  798
      |||||||||| ||||  |||||||||||||||| ||||||||||||| ||
seq2  AGGCCTGGGA-CATATGGGTCTTGTTCATATTTTAAGGCTTCCTCATCCC  799

seq1  AATTCTGCCTCCGAGGCAGGATCGAGGGGTTCATCTGACAAC-TCCTTAT  847
      |||||||||||||||||||||||||||| |||||||||| || || ||||
seq2  AATTCTGCCTCCGAGGCAGGATCGAGGGTTTCATCTGACTACTTCTTTAT  849

seq1  ACAAAATGGGGTAAATCCTTTTTGGTTTAACAGGGGGTCGAGCAATAGCC  897
      || ||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  AC-AAATGGGGTAAATTCTTTTTGGTTTAACAGGGGGTCGAGCAATA-CC  897

seq1  CCTTTTCTAGAATCTAATGTAATTTGGGGAGAAAGAGGGGAG  939
      ||||||||| ||| |||||| |||||||||||||||||||||
seq2  CCTTTTCTA-AATTTAATGT-ATTTGGGGAGAAAGAGGGGAG  937