BAC Information

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BAC

Clone NameB6Ng01-076O22
Chromosome10 (Build37)
Map Location 122,495,463 - 122,496,226
singlet/doubletsinglet
Overlap geneMon2
Upstream geneEG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik
Downstream geneUsp15, LOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076O22.g
ACCDH893050
length768
definitionDH893050|Mus musculus domesticus DNA, BAC clone: B6Ng01-076O22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattagtagtgaagattttactaatagttaaatagactcttaaa
accaccagttttttgagcatctacttcctgcacccgagtatggtattcat
acacatgacatagaacatgtgagtgccccttaattgtgaactgattttat
ttcccagaggtgaaagctgtaaaattccttgaaatgagagaccttaaagc
taccagttcctttgaatcaaggattttcttattcacctttgctttctcct
cctccaccagagctcagcgacaccctttacccgtggagagtgttcactgt
gttgactgacatgctgttcttagcacatcattagtgtcatatggacagtt
catgaagagatgttgggtgtgtatgtacgtaccctgacatacactgacat
acagttgacccagggccacgatcacaagatgggaagacaagaaaacaaag
gggtttgtttgctttgtgtttgcaaacctttgttggactggggtttcggg
agggagggattgccaggggcttctctctgaccggctctcctctgtctgct
cttttgtcttctttggccccttctgtccttgcacagcgatgggcatgggg
gagctgggagtctggagaaccatatagtgtcttcttggctcaacagattt
aaggtacccgagttagcagcaggatcagaccgaattcgggggtgtttgca
gtatgccgcctcggtgtttcagggctccaggctaggccccctccaagtgc
tttctgctcaagccacag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122495463_122496226
seq2: B6Ng01-076O22.g_72_839 (reverse)

seq1  CTGTGGC-TGAGCAGAAAGCACTTGGAGGGGGCCTAGCCTGGAGCCCTGA  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTTGAGCAGAAAGCACTTGGAGGGGGCCTAGCCTGGAGCCCTGA  50

seq1  AACACCGAGGCGGCATACTGCAAACACCCC--GATTCGGTCTGATCCTGC  97
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  AACACCGAGGCGGCATACTGCAAACACCCCCGAATTCGGTCTGATCCTGC  100

seq1  TGCTTACTCGGGTACCTT-AATCTGTTGAGCCAAGAAGACACTATATGGT  146
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCTAACTCGGGTACCTTAAATCTGTTGAGCCAAGAAGACACTATATGGT  150

seq1  TCTCCAGACTCCCAGCTCCCCCATGCCCATCGCTGTGCAAGGACAGAAGG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGACTCCCAGCTCCCCCATGCCCATCGCTGTGCAAGGACAGAAGG  200

seq1  GGCCAAAGAAGACAAAAGAGCAGACAGAGGAGAGCCGGTCAGAGAGAAGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAAGAAGACAAAAGAGCAGACAGAGGAGAGCCGGTCAGAGAGAAGC  250

seq1  CCCTGGCAATCCCTCCCTCCCGAAACCCCAGTCCAACAAAGGTTTGCAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCAATCCCTCCCTCCCGAAACCCCAGTCCAACAAAGGTTTGCAAA  300

seq1  CACAAAGCAAACAAACCCCTTTGTTTTCTTGTCTTCCCATCTTGTGATCG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCAAACAAACCCCTTTGTTTTCTTGTCTTCCCATCTTGTGATCG  350

seq1  TGGCCCTGGGTCAACTGTATGTCAGTGTATGTCAGGGTACGTACATACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGGTCAACTGTATGTCAGTGTATGTCAGGGTACGTACATACAC  400

seq1  ACCCAACATCTCTTCATGAACTGTCCATATGACACTAATGATGTGCTAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACATCTCTTCATGAACTGTCCATATGACACTAATGATGTGCTAAG  450

seq1  AACAGCATGTCAGTCAACACAGTGAACACTCTCCACGGGTAAAGGGTGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATGTCAGTCAACACAGTGAACACTCTCCACGGGTAAAGGGTGTC  500

seq1  GCTGAGCTCTGGTGGAGGAGGAGAAAGCAAAGGTGAATAAGAAAATCCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTCTGGTGGAGGAGGAGAAAGCAAAGGTGAATAAGAAAATCCTT  550

seq1  GATTCAAAGGAACTGGTAGCTTTAAGGTCTCTCATTTCAAGGAATTTTAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGGAACTGGTAGCTTTAAGGTCTCTCATTTCAAGGAATTTTAC  600

seq1  AGCTTTCACCTCTGGGAAATAAAATCAGTTCACAATTAAGGGGCACTCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCACCTCTGGGAAATAAAATCAGTTCACAATTAAGGGGCACTCAC  650

seq1  ATGTTCTATGTCATGTGTATGAATACCATACTCGGGTGCAGGAAGTAGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTATGTCATGTGTATGAATACCATACTCGGGTGCAGGAAGTAGAT  700

seq1  GCTCAAAAAACTGGTGGTTTTAAGAGTCTATTTAACTATTAGTAAAATCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAAAACTGGTGGTTTTAAGAGTCTATTTAACTATTAGTAAAATCT  750

seq1  TCACTACTAATTGAATTC  764
      ||||||||||||||||||
seq2  TCACTACTAATTGAATTC  768